BLASTX nr result

ID: Papaver23_contig00000192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000192
         (1931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   332   2e-88
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   325   3e-86
ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP...   323   1e-85
ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|2...   320   9e-85
ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP...   320   1e-84

>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Vitis vinifera]
          Length = 417

 Score =  332 bits (851), Expect = 2e-88
 Identities = 163/211 (77%), Positives = 182/211 (86%)
 Frame = -2

Query: 1636 FRLNWASFGSGDKRQDDSADFTVFVGDLAADVTDYALQETFKAHYTSVKGAKVVTDRTTG 1457
            FRLNWA+ G+G++R DD+ D+T+FVGDLA+DVTDY LQETF+ HY SVKGAKVVTDRTTG
Sbjct: 163  FRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTG 222

Query: 1456 RSKGYGFVRFADEGEQLRAMTEMNGQFCSTRPMRIGPASNKKTVGVGQQQHPKATYQSTP 1277
            RSKGYGFVRF DEGEQLRAM EMNG FCSTRPMRIGPA+ KK   VG QQ  KA++Q+T 
Sbjct: 223  RSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKP--VGGQQFQKASFQNTQ 280

Query: 1276 GGTQNESDPNNTTIFVGGLDSNVTEENLRQVFSQFGELSHVKIPVGKRCGFVQFDNRTCA 1097
             G Q ESDPNNTTIFVGGLDSNVT++ LRQVFSQ+GEL HVKIPVGKRCGFVQF NR CA
Sbjct: 281  -GNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACA 339

Query: 1096 EEALLMLNGSQLGGSNIRLSWGRSPSNKQDQ 1004
            E+AL  LNG+QLG  +IRLSWGRSPSNKQ Q
Sbjct: 340  EQALAGLNGTQLGAQSIRLSWGRSPSNKQAQ 370



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 24/35 (68%), Positives = 31/35 (88%)
 Frame = -1

Query: 1850 DEVRTLWIGDLQQWMEETYIHGCFAHTGEVLNVKV 1746
            +E+R+LWIGDLQ WMEE Y+ GCF+ TGEV++VKV
Sbjct: 87   EEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKV 121


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  325 bits (833), Expect = 3e-86
 Identities = 160/211 (75%), Positives = 179/211 (84%)
 Frame = -2

Query: 1636 FRLNWASFGSGDKRQDDSADFTVFVGDLAADVTDYALQETFKAHYTSVKGAKVVTDRTTG 1457
            FRLNWA+ G+G++R DD+ D+T+FVGDLA+DVTDY LQETF+ HY SVKGAKVVTDRTTG
Sbjct: 148  FRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTG 207

Query: 1456 RSKGYGFVRFADEGEQLRAMTEMNGQFCSTRPMRIGPASNKKTVGVGQQQHPKATYQSTP 1277
            RSKGYGFVRF DEGEQLRAM EMNG FCSTRPMRIGPA+ KK VG        A++Q+T 
Sbjct: 208  RSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVG--------ASFQNTQ 259

Query: 1276 GGTQNESDPNNTTIFVGGLDSNVTEENLRQVFSQFGELSHVKIPVGKRCGFVQFDNRTCA 1097
             G Q ESDPNNTTIFVGGLDSNVT++ LRQVFSQ+GEL HVKIPVGKRCGFVQF NR CA
Sbjct: 260  -GXQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACA 318

Query: 1096 EEALLMLNGSQLGGSNIRLSWGRSPSNKQDQ 1004
            E+AL  LNG+QLG  +IRLSWGRSPSNKQ Q
Sbjct: 319  EQALAGLNGTQLGAQSIRLSWGRSPSNKQAQ 349



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = -1

Query: 1850 DEVRTLWIGDLQQWMEETYIHGCFAHTGEVLNVKV 1746
            +E+R+LWIGDLQ WMEE Y  GCF+ TGEV++VKV
Sbjct: 72   EEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKV 106


>ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis sativus]
            gi|449472157|ref|XP_004153511.1| PREDICTED:
            polyadenylate-binding protein RBP45-like [Cucumis
            sativus]
          Length = 408

 Score =  323 bits (827), Expect = 1e-85
 Identities = 159/212 (75%), Positives = 181/212 (85%)
 Frame = -2

Query: 1636 FRLNWASFGSGDKRQDDSADFTVFVGDLAADVTDYALQETFKAHYTSVKGAKVVTDRTTG 1457
            FRLNWAS  +G+KRQDDS D+T+FVGDLA DVTDY LQETF+A Y SVKGAKVV DR TG
Sbjct: 139  FRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTG 196

Query: 1456 RSKGYGFVRFADEGEQLRAMTEMNGQFCSTRPMRIGPASNKKTVGVGQQQHPKATYQSTP 1277
            R+KGYGFV+F DE EQ+RAMTEMNG  CS+RPMRIGPA+NK T G   QQ  K +YQ+ P
Sbjct: 197  RTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGPAANKNTSG--SQQFSKTSYQNPP 254

Query: 1276 GGTQNESDPNNTTIFVGGLDSNVTEENLRQVFSQFGELSHVKIPVGKRCGFVQFDNRTCA 1097
            G TQNE+DPNNTTIFVG LDSNVT+E+LRQVFSQ+GEL HVKIP GKRCGFVQF +R+CA
Sbjct: 255  G-TQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCA 313

Query: 1096 EEALLMLNGSQLGGSNIRLSWGRSPSNKQDQS 1001
            EEAL +LNG+ +GG NIRLSWGRSPSNKQ Q+
Sbjct: 314  EEALRILNGTPIGGQNIRLSWGRSPSNKQPQA 345



 Score = 64.7 bits (156), Expect = 8e-08
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -1

Query: 1850 DEVRTLWIGDLQQWMEETYIHGCFAHTGEVLNVKV 1746
            DEVRTLWIGDLQ WM+E YI  CFAHTGEV +VKV
Sbjct: 63   DEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKV 97


>ref|XP_002319308.1| predicted protein [Populus trichocarpa] gi|222857684|gb|EEE95231.1|
            predicted protein [Populus trichocarpa]
          Length = 344

 Score =  320 bits (820), Expect = 9e-85
 Identities = 156/209 (74%), Positives = 177/209 (84%)
 Frame = -2

Query: 1636 FRLNWASFGSGDKRQDDSADFTVFVGDLAADVTDYALQETFKAHYTSVKGAKVVTDRTTG 1457
            FRLNWA+ G+G++RQDD  D+TVF+GDLAADV DY LQETF+  Y+SVKGAKVVTDR TG
Sbjct: 140  FRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVYSSVKGAKVVTDRVTG 199

Query: 1456 RSKGYGFVRFADEGEQLRAMTEMNGQFCSTRPMRIGPASNKKTVGVGQQQHPKATYQSTP 1277
            RSKGYGFVRFADE EQ+RAM EMNGQ+CSTRPMRIGPA+ KK +    QQ+ KA YQS P
Sbjct: 200  RSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRIGPAATKKPL---TQQYQKAAYQS-P 255

Query: 1276 GGTQNESDPNNTTIFVGGLDSNVTEENLRQVFSQFGELSHVKIPVGKRCGFVQFDNRTCA 1097
             G Q ESDPNNTTIFVG LD +VT++ LR VFS++GEL HVKIP GKRCGFVQF NRTCA
Sbjct: 256  QGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTCA 315

Query: 1096 EEALLMLNGSQLGGSNIRLSWGRSPSNKQ 1010
            E+AL MLNG+Q+ G NIRLSWGRSPSNKQ
Sbjct: 316  EQALSMLNGTQIAGQNIRLSWGRSPSNKQ 344


>ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
            sativus]
          Length = 404

 Score =  320 bits (819), Expect = 1e-84
 Identities = 158/212 (74%), Positives = 180/212 (84%)
 Frame = -2

Query: 1636 FRLNWASFGSGDKRQDDSADFTVFVGDLAADVTDYALQETFKAHYTSVKGAKVVTDRTTG 1457
            FRLNWAS  +G+KRQDDS D+T+FVGDLA DVTDY LQETF+A Y SVKGAKVV DR TG
Sbjct: 139  FRLNWAS--AGEKRQDDSPDYTIFVGDLAGDVTDYVLQETFRARYNSVKGAKVVIDRLTG 196

Query: 1456 RSKGYGFVRFADEGEQLRAMTEMNGQFCSTRPMRIGPASNKKTVGVGQQQHPKATYQSTP 1277
            R+KGYGFV+F DE EQ+RAMTEMNG  CS+RPMRIGPA+NK T G   QQ  K +YQ+ P
Sbjct: 197  RTKGYGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGPAANKNTSG--GQQFSKTSYQN-P 253

Query: 1276 GGTQNESDPNNTTIFVGGLDSNVTEENLRQVFSQFGELSHVKIPVGKRCGFVQFDNRTCA 1097
             G QNE+DPNNTTIFVG LD+NVT+E+LRQVF Q+GEL HVKIPVGKRCGFVQF +R CA
Sbjct: 254  QGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCA 313

Query: 1096 EEALLMLNGSQLGGSNIRLSWGRSPSNKQDQS 1001
            EEAL +LNG+Q+GG NIRLSWGRSPSNKQ Q+
Sbjct: 314  EEALRVLNGTQIGGQNIRLSWGRSPSNKQPQA 345



 Score = 64.7 bits (156), Expect = 8e-08
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -1

Query: 1850 DEVRTLWIGDLQQWMEETYIHGCFAHTGEVLNVKV 1746
            DEVRTLWIGDLQ WM+E YI  CFAHTGEV +VKV
Sbjct: 63   DEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKV 97



 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
 Frame = -2

Query: 1573 TVFVGDLAADVTDYALQETFKAHYTSVKGAKVVTDRTTGRSKGYGFVRFADEGEQLRAMT 1394
            T+++GDL   + +  +   F AH   V   KV+ ++ TG+S+GYGF+ F       R + 
Sbjct: 67   TLWIGDLQYWMDENYIFNCF-AHTGEVSSVKVIRNKQTGQSEGYGFIEFLTRPAAERVLQ 125

Query: 1393 EMNGQFCSTRPMRIGPASNKKTVGVGQQQHPKATYQSTPGGTQNESDPNNTTIFVGGLDS 1214
              NG                 T      Q+ +  + S   G + + D  + TIFVG L  
Sbjct: 126  TYNG-----------------TAMPNGAQNFRLNWAS--AGEKRQDDSPDYTIFVGDLAG 166

Query: 1213 NVTEENLRQVF-SQFGELSHVKIPVG------KRCGFVQFDNRTCAEEALLMLNGSQLGG 1055
            +VT+  L++ F +++  +   K+ +       K  GFV+F + +    A+  +NG     
Sbjct: 167  DVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVHCSS 226

Query: 1054 SNIRLSWGRSPSNKQDQSGG 995
              +R+     P+  ++ SGG
Sbjct: 227  RPMRI----GPAANKNTSGG 242


Top