BLASTX nr result

ID: Papaver23_contig00000132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000132
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi...    73   1e-10
sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh...    73   1e-10
gb|ABK21585.1| unknown [Picea sitchensis] gi|116790086|gb|ABK254...    69   2e-09
gb|ABK21039.1| unknown [Picea sitchensis] gi|116786320|gb|ABK240...    69   2e-09
gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]                69   2e-09

>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
           Protein
          Length = 76

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 38/66 (57%)
 Frame = +2

Query: 17  CGGESQTLSRCGCSNLLYMGGYQFRYTGQSARMYNTINCSGAVSNNLNGNDRRCLGVGWR 196
           C   ++  S+CGCS +   GGY F YTGQ+A +YN   CSG        + R C   GW+
Sbjct: 11  CNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSSARACNPFGWK 70

Query: 197 SIFIQC 214
           SIFIQC
Sbjct: 71  SIFIQC 76


>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
           Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
           AMP1 [Macadamia integrifolia]
          Length = 102

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 30/66 (45%), Positives = 38/66 (57%)
 Frame = +2

Query: 17  CGGESQTLSRCGCSNLLYMGGYQFRYTGQSARMYNTINCSGAVSNNLNGNDRRCLGVGWR 196
           C   ++  S+CGCS +   GGY F YTGQ+A +YN   CSG        + R C   GW+
Sbjct: 37  CNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSSARACNPFGWK 96

Query: 197 SIFIQC 214
           SIFIQC
Sbjct: 97  SIFIQC 102


>gb|ABK21585.1| unknown [Picea sitchensis] gi|116790086|gb|ABK25496.1| unknown
           [Picea sitchensis] gi|224285051|gb|ACN40253.1| unknown
           [Picea sitchensis]
          Length = 105

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = +2

Query: 17  CGGESQTLSRCGCSNL--LYMGGYQFRYTGQSARMYNTINCSGAVSNNLNGN-DRRCLGV 187
           C   +   S+CGCSN+     GGY+F Y GQ+A  YNT NC+G      +G+ ++ C G 
Sbjct: 37  CNNHAARYSKCGCSNIGGNVHGGYEFVYQGQTASAYNTANCNGVAHTRFSGSVNQACSGF 96

Query: 188 GWRSIFIQC 214
           GW+S FIQC
Sbjct: 97  GWKSFFIQC 105


>gb|ABK21039.1| unknown [Picea sitchensis] gi|116786320|gb|ABK24065.1| unknown
           [Picea sitchensis] gi|224284745|gb|ACN40103.1| unknown
           [Picea sitchensis]
          Length = 105

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = +2

Query: 17  CGGESQTLSRCGCSNL--LYMGGYQFRYTGQSARMYNTINCSGAVSNNLNGN-DRRCLGV 187
           C   +   S+CGCSN+     GGY+F Y GQ+A  YNT NC+G      +G+ ++ C G 
Sbjct: 37  CNNHAARYSKCGCSNIGGNVHGGYEFVYQGQTASAYNTANCNGVAHTRFSGSVNQACSGF 96

Query: 188 GWRSIFIQC 214
           GW+S FIQC
Sbjct: 97  GWKSFFIQC 105


>gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]
          Length = 105

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
 Frame = +2

Query: 17  CGGESQTLSRCGCSNLL--YMGGYQFRYTGQSARMYNTINCSGAVSNNLNGN-DRRCLGV 187
           C   +   S+CGCSN+     GGY+F Y GQ+A  YNT NC G      +G+ ++ C G 
Sbjct: 37  CNNHAARYSKCGCSNIGNDVHGGYEFVYQGQTASAYNTANCKGVAQTRFSGSVNQACSGF 96

Query: 188 GWRSIFIQC 214
           GW+S FIQC
Sbjct: 97  GWKSFFIQC 105


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