BLASTX nr result

ID: Papaver23_contig00000114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000114
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...    68   2e-12
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-10
ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-09
ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group] g...    67   3e-09
gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indi...    67   3e-09

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score = 68.2 bits (165), Expect(2) = 2e-12
 Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
 Frame = -2

Query: 353 IHLHILEKSRCPNDQTWEIHMED*VWTKKMDKAITSVKWDF-MLKRCD---NWWSSAEIA 186
           +HLH LE+  CPN +TWEI ME  + ++ MDKAI ++K  F MLK CD   N      IA
Sbjct: 345 LHLHTLERGGCPNYKTWEILMEGWMKSQNMDKAINAMKKGFSMLKHCDWRPNHGLVTAIA 404

Query: 185 *YFEELGNIVVEDANKYLKVICLLYLVSL 99
            Y EE GN  V D N+Y+KVI  L +  L
Sbjct: 405 RYLEEHGN--VNDLNQYVKVIHQLGVAKL 431



 Score = 30.4 bits (67), Expect(2) = 2e-12
 Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
 Frame = -1

Query: 96  MALYKLLVRLHV--RKPVPNIFNMIEKDNNQLD 4
           + LYK L+R+H+  ++PV +I  M+EKD  ++D
Sbjct: 431 LPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMD 463


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 63.2 bits (152), Expect(2) = 2e-10
 Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 7/83 (8%)
 Frame = -2

Query: 350 HLHILEKSRCPNDQTWEIHMED*VWTKKMDKAITSVKWDF---MLKRCDNWWSS----AE 192
           HLH +E+  CPN +TWEI ME  V ++KMDKAI ++K  F    ++RCD W  S      
Sbjct: 381 HLHTVERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVLKVERCD-WRPSHSILMA 439

Query: 191 IA*YFEELGNIVVEDANKYLKVI 123
           IA +FE+ GN   EDAN Y+K +
Sbjct: 440 IAEHFEKHGNF--EDANHYIKAV 460



 Score = 28.1 bits (61), Expect(2) = 2e-10
 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
 Frame = -1

Query: 96  MALYKLLVRLHV--RKPVPNIFNMIEKDNNQLD 4
           + LYKL +R+++  ++P  +I  M+EKD  +LD
Sbjct: 468 LPLYKLFLRMYLNAQRPAWDILKMMEKDRIELD 500


>ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Brachypodium distachyon]
          Length = 513

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
 Frame = -2

Query: 353 IHLHILEKSRCPNDQTWEIHMED*VWTKKMDKAITSVKWDFMLKRCDNWWSSAE----IA 186
           +HLH+LEK   PN +TWEI +E  V +++MDKA+ ++K    L +  +W    E    IA
Sbjct: 376 LHLHMLEKGAHPNYKTWEILLEGFVQSRQMDKAVNAIKKALSLSKSCHWRPPLELVEAIA 435

Query: 185 *YFEELGNIVVEDANKYLKVICLLYLVSL 99
            +FEE GN  V+DAN+Y+KV+    L SL
Sbjct: 436 TFFEEHGN--VDDANRYIKVLQKFNLTSL 462


>ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
           gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|47497238|dbj|BAD19283.1| pentatricopeptide
           (PPR) repeat-containing protein-like [Oryza sativa
           Japonica Group] gi|113537919|dbj|BAF10302.1|
           Os02g0796400 [Oryza sativa Japonica Group]
           gi|125584008|gb|EAZ24939.1| hypothetical protein
           OsJ_08720 [Oryza sativa Japonica Group]
          Length = 517

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
 Frame = -2

Query: 353 IHLHILEKSRCPNDQTWEIHMED*VWTKKMDKAITSVKWDFMLKRCDNWWSSAE----IA 186
           +HLH+LEK   PN +TWEI ME  V +K+MDKA+ ++K    L +  +W    E    IA
Sbjct: 383 LHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIA 442

Query: 185 *YFEELGNIVVEDANKYLKVICLLYLVSL 99
            YFEE G+  VEDA++++KV+    L SL
Sbjct: 443 KYFEEQGS--VEDADRFIKVLQKFNLTSL 469


>gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
          Length = 517

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
 Frame = -2

Query: 353 IHLHILEKSRCPNDQTWEIHMED*VWTKKMDKAITSVKWDFMLKRCDNWWSSAE----IA 186
           +HLH+LEK   PN +TWEI ME  V +K+MDKA+ ++K    L +  +W    E    IA
Sbjct: 383 LHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCHWRPPLELLEAIA 442

Query: 185 *YFEELGNIVVEDANKYLKVICLLYLVSL 99
            YFEE G+  VEDA++++KV+    L SL
Sbjct: 443 KYFEEQGS--VEDADRFIKVLQKFNLTSL 469


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