BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000042
         (5222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...  1488   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1481   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1413   0.0  
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]  1367   0.0  
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...  1342   0.0  

>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 1488 bits (3853), Expect = 0.0
 Identities = 765/1236 (61%), Positives = 927/1236 (75%), Gaps = 41/1236 (3%)
 Frame = -2

Query: 5104 FSFLTDEEVRKMSRKKVTCPILYNNLDIPYPNGLYDLAMGPLEDKGLCGSCGQTYFECSG 4925
            FSF TDEEVRK S KK+T P++ +++  P P GLYD A+G +++   C SCGQ  F C G
Sbjct: 66   FSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQSCGQRSFYCPG 125

Query: 4924 HCGHIDLAVPVYNPLLVRTLFQLLERTCFFCKHFRIEKEKVQKCVAQLELIKKGDITGAK 4745
            HCGHIDL   VYNPLL   L  LL++TCFFC HF+     VQK V+QLELI KGD+ GAK
Sbjct: 126  HCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAK 185

Query: 4744 NLDM---AECSAWEESDSDQTACT-TKPSEVRYNNNQNSEQHHWTSLQYSEAMSVLDGLL 4577
            NLD    +E S  E+SD    +C+ T  S  R N + + +Q  WTSLQ  EAMSV+D  L
Sbjct: 186  NLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFL 245

Query: 4576 GSKPSACRRCSAKNPRISCPTFGWFYM-NMSKASTRANVIQGVELNESFDDGAEQDVIGE 4400
              K   C+ C AK+P+++ PTFGWF+M  +S A TRANVI+G +L       AE+    E
Sbjct: 246  KLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSE 305

Query: 4399 VRHSGDS-------DSEDVESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLL 4241
            V +  D        D+++  S+ +  +G      K   +  +  P E++KQ +FFSG LL
Sbjct: 306  VENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAPIEFIKQKSFFSGPLL 365

Query: 4240 PSEAKDHMKLVWENENQICSLICDIQQQ--GMTQKRSSYSMFFIEALLVAPVKFRPPSKG 4067
            PSE +D M+ +WENE ++CS I DI Q+  G +  ++ YSMFF+E +LV P+KFRPPSKG
Sbjct: 366  PSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKG 425

Query: 4066 AM-VTDHPQTLLLGRVLESSIKLSNAHMNSSEDTRFVTQWRELQKNVNVLYDSKAVKG-G 3893
             + V +HPQT+LLG+VL+++I L NAH N+SE ++ +++W +LQ+++NVL+D K   G G
Sbjct: 426  QISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQG 485

Query: 3892 AKDSAANGGICQLLEKKDGLFRQKMMGKRVNHACRSVISPDPYLAVNEIGIPPCFALNLT 3713
             +D+ +  GICQLLEKK+G+FRQKMMGKRVN ACRSVISPDPYLAVNEIGIPP FAL LT
Sbjct: 486  QRDTGS--GICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLT 543

Query: 3712 YPERVTPWNVNKLKEAILTGGEKHPGATHYVDKYSSVKLPKAKEMRFAYARKLPTSRGVL 3533
            YPE+VTPWNV KL++AI+ G E HPGATHYVDK S+VKL   K+MR + +RKLP+SRGV+
Sbjct: 544  YPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVV 603

Query: 3532 TQTGRSVEQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYTNC 3353
             Q GRS + E EGK+VYRHL+DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHY NC
Sbjct: 604  AQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANC 663

Query: 3352 SVYNADFDGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISAVLLT 3173
            S YNADFDGDEMNVHFPQDEISRAE Y+IVNANNQY+VP+ G+P RGLIQDHI+SAVLLT
Sbjct: 664  STYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLT 723

Query: 3172 KKDTFFTRDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPEPLWT 2993
            KKDTF TR++YN LLYSSG+S+    S  G   KK+ +++SEDE++   PAIWKPEPLW+
Sbjct: 724  KKDTFLTREQYNQLLYSSGLSSG-SGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWS 782

Query: 2992 GKQVISSILHHITRTRGLAPFTIEKSGKVPSEYFGNS----------------------- 2882
            GKQVI+++L+HITR  G  PFT EK GK+P EYFG+                        
Sbjct: 783  GKQVITAVLNHITR--GRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIE 840

Query: 2881 --SGEFLLRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQM 2708
               GE+ L I KNELV GVIDK QF+K+GLVH VQELYGSN AGILLSVLSRLFT++LQM
Sbjct: 841  KKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQM 900

Query: 2707 HGFTCGVDDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPMTLQAETEKTIR 2528
            HGFTCGVDDLLI+P+ +  R   L+KSE IG+ VHC+F+GS  G IDP+ LQ E EK I 
Sbjct: 901  HGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIIL 960

Query: 2527 TNAESATTRLDRMMSSALNGTTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQ 2348
            +N E+A TRLDRMM + LN  TS+VNK+L  KGL KPFPKNCLSLMTTTGAKG  VNF+Q
Sbjct: 961  SNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQ 1020

Query: 2347 ISSLLGQQELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAG 2168
            ISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFISDRFLTGL PQEYYFHCMAG
Sbjct: 1021 ISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAG 1080

Query: 2167 REGLVDTAVKTSRSGYLQRCLIKNLECLKVGYDHTVRDSDGSIVQFCYGEDGVDVHKTSF 1988
            REGLVDTAVKTSRSGYLQRCLIKNLECLKV YD+TVRDSDGSIVQF YG+DGVDVH+TSF
Sbjct: 1081 REGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSF 1140

Query: 1987 ISEFNILAANQEVVLDKLGGGCEDALVMKFNNYIKDMPEPLEGKINEFISSLSKKQRASL 1808
            I+EF  LA N+EVV +K G   +D    KFN YI+ +P+ L  K  +FI    ++++   
Sbjct: 1141 ITEFEALAVNEEVVCEKFG---QDG---KFNGYIQKLPKELRKKTKKFIEGFMEERQDFD 1194

Query: 1807 QXXXXXXXXXXXXXKYFRSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGQGEMNVTLG 1628
                          KY  SLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAG+GE+NVTLG
Sbjct: 1195 NMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLG 1254

Query: 1627 VPRLQEILMRASEKIQTPVMTCPLRKGKTRDDADRL 1520
            +PRLQEILM A+  I+TP+MTCPL+ G+++DDA+RL
Sbjct: 1255 IPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERL 1290



 Score =  390 bits (1002), Expect = e-105
 Identities = 221/463 (47%), Positives = 291/463 (62%), Gaps = 26/463 (5%)
 Frame = -1

Query: 1418 KLKKVTVADIIEKIEVNVVPFSVYKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLD 1239
            KLKKVTVADI E +EV++VPF+V   Q  +++KLK+K++ P  +PP+  I+LEDC +TL+
Sbjct: 1293 KLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLE 1352

Query: 1238 VLFVRELEDSIENHLIMVSKVSGITNMGRESEAVNXXXXXXXXXXXDSSKQSHXXXXXXX 1059
             +FVRELED+I+NHL+++SK+SGI N   +S ++            + +           
Sbjct: 1353 AVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSM------ASKETDEDASGDGLAGGNGD 1406

Query: 1058 XXXXXXXXXXXXDLGVDAQKRKEQATDEMDYGE-----DGMETETSLVENVDAEGSESEG 894
                        DLG+DAQKRK+QA+DEMDYG+     D  E    L E +D    E E 
Sbjct: 1407 EDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVE- 1465

Query: 893  DDVGNKENDQGTDGEPQILDAEEEPKSVLASKSSDKREPGSXXXXXXXXXXXXXXKESDR 714
              + N E       E  I D ++E   V  SKS   +   +              K+ DR
Sbjct: 1466 --ISNNE-------EVGISDPKDEDSKV-PSKSKSSKNKKAKTEAKRKKRFRAIKKDFDR 1515

Query: 713  VFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA---- 546
               V+AKG  FEVH RFT+EPHI+L+++ +KAA  VYI+ SG I+ C VID N+D     
Sbjct: 1516 AILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYY 1575

Query: 545  ----------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAA 414
                            KL ALQTAGVDF AFW M D+LD+ ++ SN++H +L T+GVEAA
Sbjct: 1576 GRDPKKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAA 1635

Query: 413  RATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRH-GIASSTSPFSKMSFET 237
            RATII EV  VF+AYG+KVNIRHL+LIAD+MTH+G  RP +RH GIA S SPFSKM+FET
Sbjct: 1636 RATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFET 1695

Query: 236  AAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 108
            A+KFIV+AA HG  D+LES SARICLGLPVK+GTG FDL+Q++
Sbjct: 1696 ASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1738


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1481 bits (3833), Expect = 0.0
 Identities = 763/1229 (62%), Positives = 924/1229 (75%), Gaps = 34/1229 (2%)
 Frame = -2

Query: 5104 FSFLTDEEVRKMSRKKVTCPILYNNLDIPYPNGLYDLAMGPLEDKGLCGSCGQTYFECSG 4925
            FSF TDEEVRK S KK+T P++ +++  P P GLYD A+G +++   C SCGQ  F C G
Sbjct: 17   FSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQSCGQRSFYCPG 76

Query: 4924 HCGHIDLAVPVYNPLLVRTLFQLLERTCFFCKHFRIEKEKVQKCVAQLELIKKGDITGAK 4745
            HCGHIDL   VYNPLL   L  LL++TCFFC HF+     VQK V+QLELI KGD+ GAK
Sbjct: 77   HCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLELISKGDVVGAK 136

Query: 4744 NLDM---AECSAWEESDSDQTACT-TKPSEVRYNNNQNSEQHHWTSLQYSEAMSVLDGLL 4577
            NLD    +E S  E+SD    +C+ T  S  R N + + +Q  WTSLQ  EAMSV+D  L
Sbjct: 137  NLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFL 196

Query: 4576 GSKPSACRRCSAKNPRISCPTFGWFYM-NMSKASTRANVIQGVELNESFDDGAEQDVIGE 4400
              K   C+ C AK+P+++ PTFGWF+M  +S A TRANVI+G +L    + G + D    
Sbjct: 197  KLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLN-GVDTDET-- 253

Query: 4399 VRHSGDSDSEDVESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLLPSEAKDH 4220
              HS  + ++ ++   +         K+   KG   P  E++KQ +FFSG LLPSE +D 
Sbjct: 254  --HSSIAPTDGIQDTVT---------KRLERKGAQAP-IEFIKQKSFFSGPLLPSEVRDI 301

Query: 4219 MKLVWENENQICSLICDIQQQ--GMTQKRSSYSMFFIEALLVAPVKFRPPSKGAM-VTDH 4049
            M+ +WENE ++CS I DI Q+  G +  ++ YSMFF+E +LV P+KFRPPSKG + V +H
Sbjct: 302  MERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEH 361

Query: 4048 PQTLLLGRVLESSIKLSNAHMNSSEDTRFVTQWRELQKNVNVLYDSKAVKG-GAKDSAAN 3872
            PQT+LLG+VL+++I L NAH N+SE ++ +++W +LQ+++NVL+D K   G G +D+ + 
Sbjct: 362  PQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGS- 420

Query: 3871 GGICQLLEKKDGLFRQKMMGKRVNHACRSVISPDPYLAVNEIGIPPCFALNLTYPERVTP 3692
             GICQLLEKK+G+FRQKMMGKRVN ACRSVISPDPYLAVNEIGIPP FAL LTYPE+VTP
Sbjct: 421  -GICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTP 479

Query: 3691 WNVNKLKEAILTGGEKHPGATHYVDKYSSVKLPKAKEMRFAYARKLPTSRGVLTQTGRSV 3512
            WNV KL++AI+ G E HPGATHYVDK S+VKL   K+MR + +RKLP+SRGV+ Q GRS 
Sbjct: 480  WNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSS 539

Query: 3511 EQELEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYTNCSVYNADF 3332
            + E EGK+VYRHL+DGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHY NCS YNADF
Sbjct: 540  DNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADF 599

Query: 3331 DGDEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISAVLLTKKDTFFT 3152
            DGDEMNVHFPQDEISRAE Y+IVNANNQY+VP+ G+P RGLIQDHI+SAVLLTKKDTF T
Sbjct: 600  DGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLT 659

Query: 3151 RDEYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPEPLWTGKQVISS 2972
            R++YN LLYSSG+S+    S  G   KK+ +++SEDE++   PAIWKPEPLW+GKQVI++
Sbjct: 660  REQYNQLLYSSGLSSG-SGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITA 718

Query: 2971 ILHHITRTRGLAPFTIEKSGKVPSEYFGNS-------------------------SGEFL 2867
            +L+HITR  G  PFT EK GK+P EYFG+                           GE+ 
Sbjct: 719  VLNHITR--GRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHGEYK 776

Query: 2866 LRIQKNELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCGV 2687
            L I KNELV GVIDK QF+K+GLVH VQELYGSN AGILLSVLSRLFT++LQMHGFTCGV
Sbjct: 777  LLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFTCGV 836

Query: 2686 DDLLITPDVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPMTLQAETEKTIRTNAESAT 2507
            DDLLI+P+ +  R   L+KSE IG+ VHC+F+GS  G IDP+ LQ E EK I +N E+A 
Sbjct: 837  DDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAI 896

Query: 2506 TRLDRMMSSALNGTTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLGQ 2327
            TRLDRMM + LN  TS+VNK+L  KGL KPFPKNCLSLMTTTGAKG  VNF+QISS LGQ
Sbjct: 897  TRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQ 956

Query: 2326 QELEGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDT 2147
            Q+LEGKRVPRMVSGKTLPCF PWD A+RAGGFISDRFLTGL PQEYYFHCMAGREGLVDT
Sbjct: 957  QDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDT 1016

Query: 2146 AVKTSRSGYLQRCLIKNLECLKVGYDHTVRDSDGSIVQFCYGEDGVDVHKTSFISEFNIL 1967
            AVKTSRSGYLQRCLIKNLECLKV YD+TVRDSDGSIVQF YG+DGVDVH+TSFI+EF  L
Sbjct: 1017 AVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEAL 1076

Query: 1966 AANQEVVLDKLGGGCEDALVMKFNNYIKDMPEPLEGKINEFISSLSKKQRASLQXXXXXX 1787
            A N+EVV +K G   +D    KFN YI+ +P+ L  K  +FI    ++++          
Sbjct: 1077 AVNEEVVCEKFG---QDG---KFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKD 1130

Query: 1786 XXXXXXXKYFRSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGQGEMNVTLGVPRLQEI 1607
                   KY  SLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAG+GE+NVTLG+PRLQEI
Sbjct: 1131 FVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEI 1190

Query: 1606 LMRASEKIQTPVMTCPLRKGKTRDDADRL 1520
            LM A+  I+TP+MTCPL+ G+++DDA+RL
Sbjct: 1191 LMTAANDIKTPIMTCPLQMGRSKDDAERL 1219



 Score =  390 bits (1002), Expect = e-105
 Identities = 221/463 (47%), Positives = 291/463 (62%), Gaps = 26/463 (5%)
 Frame = -1

Query: 1418 KLKKVTVADIIEKIEVNVVPFSVYKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLD 1239
            KLKKVTVADI E +EV++VPF+V   Q  +++KLK+K++ P  +PP+  I+LEDC +TL+
Sbjct: 1222 KLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLE 1281

Query: 1238 VLFVRELEDSIENHLIMVSKVSGITNMGRESEAVNXXXXXXXXXXXDSSKQSHXXXXXXX 1059
             +FVRELED+I+NHL+++SK+SGI N   +S ++            + +           
Sbjct: 1282 AVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSM------ASKETDEDASGDGLAGGNGD 1335

Query: 1058 XXXXXXXXXXXXDLGVDAQKRKEQATDEMDYGE-----DGMETETSLVENVDAEGSESEG 894
                        DLG+DAQKRK+QA+DEMDYG+     D  E    L E +D    E E 
Sbjct: 1336 EDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVE- 1394

Query: 893  DDVGNKENDQGTDGEPQILDAEEEPKSVLASKSSDKREPGSXXXXXXXXXXXXXXKESDR 714
              + N E       E  I D ++E   V  SKS   +   +              K+ DR
Sbjct: 1395 --ISNNE-------EVGISDPKDEDSKV-PSKSKSSKNKKAKTEAKRKKRFRAIKKDFDR 1444

Query: 713  VFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA---- 546
               V+AKG  FEVH RFT+EPHI+L+++ +KAA  VYI+ SG I+ C VID N+D     
Sbjct: 1445 AILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYY 1504

Query: 545  ----------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAA 414
                            KL ALQTAGVDF AFW M D+LD+ ++ SN++H +L T+GVEAA
Sbjct: 1505 GRDPKKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAA 1564

Query: 413  RATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRH-GIASSTSPFSKMSFET 237
            RATII EV  VF+AYG+KVNIRHL+LIAD+MTH+G  RP +RH GIA S SPFSKM+FET
Sbjct: 1565 RATIIKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFET 1624

Query: 236  AAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 108
            A+KFIV+AA HG  D+LES SARICLGLPVK+GTG FDL+Q++
Sbjct: 1625 ASKFIVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1667


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1413 bits (3657), Expect = 0.0
 Identities = 729/1226 (59%), Positives = 895/1226 (73%), Gaps = 30/1226 (2%)
 Frame = -2

Query: 5107 SFSFLTDEEVRKMSRKKVTCPILYNNLDIPYPNGLYDLAMGPLEDKGLCGSCGQTYFECS 4928
            SFSFLTDEEVRK S  K+T P L + ++ P P GLYD A+GPL ++ +C +CGQ    C 
Sbjct: 19   SFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTICKTCGQRSTNCP 78

Query: 4927 GHCGHIDLAVPVYNPLLVRTLFQLLERTCFFCKHFRIEKEKVQKCVAQLELIKKGDITGA 4748
            GHCGHIDL  PVYNPLL   L +LL+RTCF C HFR+++ +V+KC+ QLELI KGDI GA
Sbjct: 79   GHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLELIVKGDIVGA 138

Query: 4747 KNLDM---AECSAWEESDSDQTACTTKPSEVRYNNNQNSEQHHWTSLQYSEAMSVLDGLL 4577
            K L+    +E    EESD    +C T  S V+ N+ +++ Q  WTSLQ++EAMSVL+  L
Sbjct: 139  KRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQFTEAMSVLNNFL 198

Query: 4576 GSKPSACRRCSAKNPRISCPTFGWFYMN-MSKASTRANVIQGVELNESFDDGAEQDVIGE 4400
              K   C+ C + NP I+ PTFGWF+ + MS AS RANVI G +L        E      
Sbjct: 199  KPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGGLLGSEIE------ 252

Query: 4399 VRHSGDSDSEDVESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLLPSEAKDH 4220
                G +D ED    G  ++GT    KK R + +     E+ +Q + FS  LLPSE K+ 
Sbjct: 253  ----GTTDVEDAAEPGDQHSGTKKHKKKERKEVL-----EFTRQKSTFSKQLLPSEVKEK 303

Query: 4219 MKLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA-MVTDHPQ 4043
            ++L+W+NE +ICS I D+QQQ   ++++  +MFF+E +LV P+KFRPP+KG   V +HPQ
Sbjct: 304  LELLWKNEARICSFISDLQQQEFGKRKAGPAMFFLETILVPPIKFRPPTKGGDSVMEHPQ 363

Query: 4042 TLLLGRVLESSIKLSNAHMNSSEDTRFVTQWRELQKNVNVLYDSKAVKGGAKDSAANGGI 3863
            T+LL +VL+S+I L +AH+N  E ++ V +W +LQ+++N L+DSK  KG  +   A G I
Sbjct: 364  TVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLFDSKTAKGPGQREGAPG-I 421

Query: 3862 CQLLEKKDGLFRQKMMGKRVNHACRSVISPDPYLAVNEIGIPPCFALNLTYPERVTPWNV 3683
            CQLLEKK+GLFRQKMMGKRVN+ACRSVISPDPY+ VNEIGIPPCFA+ LTYPERVTPWN+
Sbjct: 422  CQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPPCFAVKLTYPERVTPWNI 481

Query: 3682 NKLKEAILTGGEKHPGATHYVDKYSSVKLPKAKEMRFAYARKLPTSRGVLTQTGRSVEQE 3503
             KL+ A++ G E HPGATHYVDK S  KLP A++ R + +RKLP+SRG +TQ G+  E E
Sbjct: 482  AKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKLPSSRGAVTQAGKGSECE 541

Query: 3502 LEGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYTNCSV-YNADFDG 3326
             EGK+VYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHY NCS+ YNADFDG
Sbjct: 542  FEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSITYNADFDG 601

Query: 3325 DEMNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISAVLLTKKDTFFTRD 3146
            DEMNVHFPQDE+SRAE Y+IVNANNQ++ P++GEP RGLIQDHI+SAVLLTKKDTF ++D
Sbjct: 602  DEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDHIVSAVLLTKKDTFLSQD 661

Query: 3145 EYNYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPEPLWTGKQVISSIL 2966
            E+N LLYSSGVS    NS  G   +K+    SEDE++  PPAIWKP+PLWTGKQVI++IL
Sbjct: 662  EFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAIWKPKPLWTGKQVITAIL 721

Query: 2965 HHITRTRGLAPFTIEKSGKVPSEYFGNSSGEFL---------------------LRIQKN 2849
            +HIT      PFT+EK  K+PS +F + + E                       + + KN
Sbjct: 722  NHITSDH--PPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKDAPAEKEPDEEKMLVYKN 779

Query: 2848 ELVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCGVDDLLIT 2669
            ELV GVIDK QF ++GLVHTV EL GS+ AGILLSVLSRLFT YLQMHGFTCGVDDLLI 
Sbjct: 780  ELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTAYLQMHGFTCGVDDLLIL 839

Query: 2668 PDVETKRTSILEKSEEIGKKVHCQFVGSADGDI--DPMTLQAETEKTIRTNAESATTRLD 2495
             + + +R   LE  E+ G+ VH  F+G  D  I  DP+ +Q   EKTIR++ +SA   LD
Sbjct: 840  TNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLNIEKTIRSDGDSALAYLD 899

Query: 2494 RMMSSALNGTTSQ-VNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLGQQEL 2318
            R MS+ LN  TS  V   L   GL KP  KNC+SLMTT+GAKG  VNF QISS LGQQEL
Sbjct: 900  RQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQEL 959

Query: 2317 EGKRVPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVK 2138
            EGKRVPRMVSGKTLPCFHPWD A+R+GG+I+DRFLTGLRPQEYYFHCMAGREGLVDTAVK
Sbjct: 960  EGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEYYFHCMAGREGLVDTAVK 1019

Query: 2137 TSRSGYLQRCLIKNLECLKVGYDHTVRDSDGSIVQFCYGEDGVDVHKTSFISEFNILAAN 1958
            TSRSGYLQRCLIKNLECLK+GYDHTVRD+DGS+VQF YGEDGVDVH+TSFI++F  LA N
Sbjct: 1020 TSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGVDVHQTSFIAKFKELALN 1079

Query: 1957 QEVVLDKLGGGCEDALVMKFNNYIKDMPEPLEGKINEFISSLSKKQRASLQXXXXXXXXX 1778
            Q+++  + GG      +  FN+YI ++PE L+ K + F+   S   R +           
Sbjct: 1080 QDMIYKRSGG-----QLGAFNSYISELPEALKEKADRFLDDFSIMGRIASNLVKREDLYN 1134

Query: 1777 XXXXKYFRSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGQGEMNVTLGVPRLQEILMR 1598
                K+  SLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAG+GEMNVTLG+PRLQEILM 
Sbjct: 1135 LMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMT 1194

Query: 1597 ASEKIQTPVMTCPLRKGKTRDDADRL 1520
            AS  I+TP+MTCPL++G+T +DAD L
Sbjct: 1195 ASIDIKTPIMTCPLQEGRTNEDADHL 1220



 Score =  370 bits (950), Expect = 2e-99
 Identities = 215/469 (45%), Positives = 289/469 (61%), Gaps = 32/469 (6%)
 Frame = -1

Query: 1418 KLKKVTVADIIEKIEVNVVPFSVYKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLD 1239
            KL+KVTVADI+E +EV+VVPF++    V  ++KLK+K++ P H+P Y +I++ED  +TL+
Sbjct: 1223 KLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLE 1282

Query: 1238 VLFVRELEDSIENHLIMVSKVSGITNMGRESEAVNXXXXXXXXXXXDSSKQSHXXXXXXX 1059
            V+F+RELED+I+NH+ ++S++SGI +   ES +              S ++         
Sbjct: 1283 VVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADEDVAGDMSHREER------D 1336

Query: 1058 XXXXXXXXXXXXDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAE---GSESE--- 897
                        DLG+DAQKRK QATDEMDY +DG E E +  E+  +E   G ESE   
Sbjct: 1337 DDNDDDDGERADDLGLDAQKRKLQATDEMDY-DDGFEEELNEGESTASEEESGFESEIDQ 1395

Query: 896  GDDVGNKENDQGTDGE-----PQILDAEEEPKSVLASKSSDKREPGSXXXXXXXXXXXXX 732
            GD+     ND   D E     P    ++ + K   A   S   +                
Sbjct: 1396 GDNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRI 1455

Query: 731  XKESDRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--- 561
             K+ DR  FVEA+ + FEVH +FT+EPHI+L+++ +K AK VYI+  G IE+C V D   
Sbjct: 1456 SKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKE 1515

Query: 560  -----YNRD------------AKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRT 432
                 Y +D             K+ AL   GVDF  FW M D LD+ +I SN++H +L+T
Sbjct: 1516 SQVIYYGKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKT 1575

Query: 431  YGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSR-HGIASSTSPFS 255
            YGVEAAR TII E+  VF +YGI V+ RHL+LIAD+MTHTG  RP SR  GIA S SPFS
Sbjct: 1576 YGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFS 1635

Query: 254  KMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 108
            KMSFETA+KFIV+AA HGE+D+LE+PSARICLGLPVK+GTGSFDL+Q++
Sbjct: 1636 KMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKL 1684


>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score = 1367 bits (3539), Expect = 0.0
 Identities = 739/1276 (57%), Positives = 900/1276 (70%), Gaps = 87/1276 (6%)
 Frame = -2

Query: 5104 FSFLTDEEVRKMSRKKVTCPILYNNLDIPYPNGLYDLAMGPLEDKGLCGSCGQTYFECSG 4925
            FSF TDEEVRK S KK+T P++ +++  P P GLYD A+G + D+   G+          
Sbjct: 110  FSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSI-DENTPGN---------- 158

Query: 4924 HCGHIDLAVPVYNPLLVRTLFQLLERTCFFCKHFRIEKEKVQKCVAQLELIKKGDITGAK 4745
              G I         L+V+   +L         HF  +   VQK V+QLELI KGD+ GAK
Sbjct: 159  --GRI--------LLIVKKREELQXVNHAASVHFIAQ---VQKYVSQLELISKGDVVGAK 205

Query: 4744 NLDM---AECSAWEESDSDQTACT-TKPSEVRYNNNQNSEQHHWTSLQYSEAMSVLDGLL 4577
            NLD    +E S  E+SD    +C+ T  S  R N + + +Q  WTSLQ  EAMSV+D  L
Sbjct: 206  NLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEWTSLQCIEAMSVMDNFL 265

Query: 4576 GSKPSACRRCSAKNPRISCPTFGWFYM-NMSKASTRANVIQGVELNESFDDGAEQDVIGE 4400
              K   C+ C AK+P+++ PTFGWF+M  +S A TRANVI+G +L       AE+    E
Sbjct: 266  KLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERPLSRVAEEKSSSE 325

Query: 4399 VRHSGDS-------DSEDVESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLL 4241
            V +  D        D+++  S+ +  +G      K   +  +  P E++KQ +FFSG LL
Sbjct: 326  VENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKXLERKGAQAPIEFIKQKSFFSGPLL 385

Query: 4240 PSEA----------------------------KDHMKLVWENENQICSLICDIQQQ--GM 4151
            PSE                             +D M+ +WENE ++CS I DI Q+  G 
Sbjct: 386  PSEVCFLXALEHHHQLPWLMSVVVVNYVVTKVRDIMERLWENEAELCSFISDILQERLGA 445

Query: 4150 TQKRSSYSMFFIEALLVAPVKFRPPSKGAM-VTDHPQTLLLGRVLESSIKLSNAHMNSSE 3974
            +  ++ YSMFF+E +LV P+KFRPPSKG + V +HPQT+LLG+VL+++I L NAH N+SE
Sbjct: 446  SGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSE 505

Query: 3973 DTRFVTQWRELQKNVNVLYDSKAVKG-GAKDSAANGGICQLLEKKDGLFRQKMMGKRVNH 3797
             ++ +++W +LQ+++NVL+D K   G G +D+ +  GICQLLEKK+G+FRQKMMGKRVN 
Sbjct: 506  RSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGS--GICQLLEKKEGVFRQKMMGKRVNF 563

Query: 3796 ACRSVISPDPYLAVNEIGIPPCFALNLTYPERVTPWNVNKLKEAILTGGEKHPGATHYVD 3617
            ACRSVISPDPYLAVNEIGIPP FAL LTYPE+VTPWNV KL++AI+ G E HPGATHYVD
Sbjct: 564  ACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVD 623

Query: 3616 KYSSVKLPKAKEMRFAYARKLPTSRGVLTQTGRSVEQELEGKVVYRHLRDGDIVLVNRQP 3437
            K S+VKL   K+MR + +RKLP+SRGV+ Q GRS + E EGK+VYRHL+DGDIVLVNRQP
Sbjct: 624  KLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQP 683

Query: 3436 TLHKPSIMAHVVRVLKGEKTLRMHYTNC------------------SVYNADFDGDEMNV 3311
            TLHKPSIMAHVVRVLKGEKTLRMHY NC                  S YNADFDGDEMNV
Sbjct: 684  TLHKPSIMAHVVRVLKGEKTLRMHYANCRVESEHISMLDLDDCSDSSTYNADFDGDEMNV 743

Query: 3310 HFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISAVLLTKKDTFFTRDEYNYL 3131
            HFPQDEISRAE Y+IVNANNQY+VP+ G+P RGLIQDHI+SAVLLTKKDTF TR++YN L
Sbjct: 744  HFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLTKKDTFLTREQYNQL 803

Query: 3130 LYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPEPLWTGKQVISSILHHITR 2951
            LYSSG+S+    S  G   KK+ +++SEDE++   PAIWKPEPLW+GKQVI+++L+HITR
Sbjct: 804  LYSSGLSSG-SGSFIGKPGKKVSVLDSEDEMQPLLPAIWKPEPLWSGKQVITAVLNHITR 862

Query: 2950 TRGLAPFTIEKSGKVPSEYFGNS-------------------------SGEFLLRIQKNE 2846
              G  PFT EK GK+P EYFG+                           GE+ L I KNE
Sbjct: 863  --GRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIEKKHGEYKLLIHKNE 920

Query: 2845 LVHGVIDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCGVDDLLITP 2666
            LV GVIDK QF+K+GLVH VQELYGSN AGILLSVLSRLFT++LQMHGFTCGVDDLLI+P
Sbjct: 921  LVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQMHGFTCGVDDLLISP 980

Query: 2665 DVETKRTSILEKSEEIGKKVHCQFVGSADGDIDPMTLQAETEKTIRTNAESATTRLDRMM 2486
            + +  R   L+KSE IG+ VHC+F+GS  G IDP+ LQ E EK I +N E+A TRLDRMM
Sbjct: 981  NYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIILSNGEAAITRLDRMM 1040

Query: 2485 SSALNGTTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKR 2306
             + LN  TS+VNK+L  KGL KPFPKNCLSLMTTTGAKG  VNF+QISS LGQQ+LEGKR
Sbjct: 1041 KNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQISSFLGQQDLEGKR 1100

Query: 2305 VPRMVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRS 2126
            VPRMVSGKTLPCF PWD A+RAGGFISDRFLTGL PQEYYFHCMAGREGLVDTAVKTSRS
Sbjct: 1101 VPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAGREGLVDTAVKTSRS 1160

Query: 2125 GYLQRCLIKNLECLKVGYDHTVRDSDGSIVQFCYGEDGVDVHKTSFISEFNILAANQEVV 1946
            GYLQRCLIKNLECLKV YD+TVRDSDGSIVQF YG+DGVDVH+TSFI+EF  LA NQEVV
Sbjct: 1161 GYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNQEVV 1220

Query: 1945 LDKLGGGCEDALVMKFNNYIKDMPEPLEGKINEFISSLSKKQRASLQXXXXXXXXXXXXX 1766
             +K G   +D    KFN YI+ +P+ L  K  +FI    ++++                 
Sbjct: 1221 CEKFG---QDG---KFNGYIQKLPKELRKKTKKFIEGFMEERQDFDNMKKQKDFVNLVKQ 1274

Query: 1765 KYFRSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGQGEMNVTLGVPRLQEILMRASEK 1586
            KY  SLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAG+GE+NVTLG+PRLQEILM A+  
Sbjct: 1275 KYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTAAND 1334

Query: 1585 IQTPVMTCPLRKGKTR 1538
            I+TP+MTCPL+ G+++
Sbjct: 1335 IKTPIMTCPLQMGRSK 1350


>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1653

 Score = 1342 bits (3473), Expect = 0.0
 Identities = 717/1216 (58%), Positives = 872/1216 (71%), Gaps = 23/1216 (1%)
 Frame = -2

Query: 5107 SFSFLTDEEVRKMSRKKVTCPILYNNLDIPYPNGLYDLAMGPLEDKGLCGSCGQTYFECS 4928
            +FSFLTD+E+R+ SR K+T PIL + L  P P+GLYD A+GP +DK LC SCGQT   C 
Sbjct: 16   AFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDDKSLCKSCGQTSKHCP 75

Query: 4927 GHCGHIDLAVPVYNPLLVRTLFQLLERTCFFCKHFRIEKEKVQKCVAQLELIKKGDITGA 4748
            GH GHI+L  PVYNPL+   L  +L+RTCF C HFR   ++V    +QLELI KGDI  A
Sbjct: 76   GHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIRTSQLELIMKGDIIRA 135

Query: 4747 KNLDMAECSAWEESDSDQTACTTKPSEVRYNNNQNSEQ--HHWTSLQYSEAMSVLDGLLG 4574
            K L+       +  DS     +  P +   +   ++EQ   +WTSLQ+SEAMSVL  LL 
Sbjct: 136  KRLE--SIIPGKSVDSFNPDESIHPGDGDESQCYSAEQLGENWTSLQFSEAMSVLRKLLT 193

Query: 4573 SKPSACRRCSAKNPRISCPTFGWFYMNMSKAS-TRANVIQGVELNESFDDGAEQDVIGEV 4397
             K   C++C AKNP+IS PTFGWF+MN+  A  TRA+ I+ VE   + DD +        
Sbjct: 194  KKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSVESETTNDDIS-------- 245

Query: 4396 RHSGDSDSEDVESAGSVYNGTPSPGKKSRNKGVSGPPSEYLKQSNFFSGVLLPSEAKDHM 4217
               G  D+ DVE   S   GT    K+ + K      S  L + N  SG LLPS+ K  +
Sbjct: 246  --LGGGDTTDVEDITSA--GTAKRDKRKKEK-----LSYKLAEQNKLSGSLLPSQVKGIL 296

Query: 4216 KLVWENENQICSLICDIQQQGMTQKRSSYSMFFIEALLVAPVKFRPPSKGA-MVTDHPQT 4040
            +L+WENE ++CS I DIQ QG   K++ +SMFF+E + V P+KFRPP+KG   V +HPQT
Sbjct: 297  ELLWENEARLCSYINDIQDQGFG-KKAGHSMFFLENIFVPPIKFRPPTKGGDNVMEHPQT 355

Query: 4039 LLLGRVLESSIKLSNAHMNSSEDTRFVTQWRELQKNVNVLYDSKAVKGGAKDSAANGGIC 3860
            +LL +VL+ +I L +AH+N S+ ++ +++W +LQ++VN+L+D+K   G +K   A G IC
Sbjct: 356  VLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLFDNKTASGESKRDVATG-IC 414

Query: 3859 QLLEKKDGLFRQKMMGKRVNHACRSVISPDPYLAVNEIGIPPCFALNLTYPERVTPWNVN 3680
            QLLEKK+G+FRQKMMGKRVN ACRSVISPDPYLAVNEIGIPP FAL L+YPERVTPWNV 
Sbjct: 415  QLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLSYPERVTPWNVV 474

Query: 3679 KLKEAILTGGEKHPGATHYVDKYSSVKLPKAKEMRFAYARKLPTSRGVLTQTGRSVEQEL 3500
            KL+ AIL G E HPGATHY DK S VKLP   ++    +RKLPTSRGV+   G+  + E 
Sbjct: 475  KLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILHQGKISDHEF 534

Query: 3499 EGKVVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYTNCSVYNADFDGDE 3320
            EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAH+VRVLKGEKT+RMHY NCS YNADFDGDE
Sbjct: 535  EGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVRMHYANCSTYNADFDGDE 594

Query: 3319 MNVHFPQDEISRAEGYHIVNANNQYLVPTSGEPKRGLIQDHIISAVLLTKKDTFFTRDEY 3140
            +NVHFPQDEISRAE Y+IVNANNQY+ PTSG+P R LIQDHI+SA LLTKKDTF + +E+
Sbjct: 595  INVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFLSYEEF 654

Query: 3139 NYLLYSSGVSAAVRNSSSGASRKKIYMINSEDELEGAPPAIWKPEPLWTGKQVISSILHH 2960
            N LLYSSGVS A   S  G   +K+++ NSE E+   PPAIWKPEPLWTGKQVIS++L++
Sbjct: 655  NQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWKPEPLWTGKQVISALLYY 714

Query: 2959 ITRTRGLAPFTIEKSGKVPSEYF-----------------GNSSGEFLLRIQKNELVHGV 2831
            I  TRG  PFT EK+ K+PS +F                  +   E  L I KN+LV GV
Sbjct: 715  I--TRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDKPDEDKLLIYKNDLVRGV 772

Query: 2830 IDKNQFEKHGLVHTVQELYGSNVAGILLSVLSRLFTLYLQMHGFTCGVDDLLITPDVETK 2651
            +DK QF  +G++HTVQELYGSNVAG LLS LSRLFT +LQMHGFTCGVDDL++T   + +
Sbjct: 773  VDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHGFTCGVDDLMLTEGKDVE 832

Query: 2650 RTSILEKSEEIGKKVHCQFVGSADGD-IDPMTLQAETEKTIRTNAESATTRLDRMMSSAL 2474
            R + L+  E IG  VH +F+G  + D IDP+TLQ   EK IR+N E+A T LDR M+S L
Sbjct: 833  RMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRSNGEAALT-LDRKMTSNL 891

Query: 2473 NG-TTSQVNKELFPKGLQKPFPKNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPR 2297
            N  T+S + K+L  +G+ KP  KNC+SLMTT+GAKG +VNF QISS LGQQELEGKRVPR
Sbjct: 892  NSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPR 951

Query: 2296 MVSGKTLPCFHPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYL 2117
            MVSGKTLPCF PWD + RAGGFI DRFLT L PQEYYFHCMAGREGLVDTAVKTSRSGYL
Sbjct: 952  MVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAGREGLVDTAVKTSRSGYL 1011

Query: 2116 QRCLIKNLECLKVGYDHTVRDSDGSIVQFCYGEDGVDVHKTSFISEFNILAANQEVVLDK 1937
            QRCL+KNLECLKV YDHTVRD+DGSI+QF YGEDGVDVH+TSFI+EF  L+ N+E+V   
Sbjct: 1012 QRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSN 1071

Query: 1936 LGGGCEDALVMKFNNYIKDMPEPLEGKINEFISSLSKKQRASLQXXXXXXXXXXXXXKYF 1757
                C    + + + YI  +PE LEGK  +F      KQR +L              KY 
Sbjct: 1072 Y---CRQ--LDRSSPYINKLPEALEGKAEKF-----SKQR-NLGSMEQADFLRLMEHKYV 1120

Query: 1756 RSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGQGEMNVTLGVPRLQEILMRASEKIQT 1577
              LAQPGEPVGVLA+QSVGEP+TQMTLNTFHLAG+GEMNVTLG+PRLQEILM A+  I+T
Sbjct: 1121 SCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARDIKT 1180

Query: 1576 PVMTCPLRKGKTRDDA 1529
            P MTCPLR  K+  DA
Sbjct: 1181 PFMTCPLRHDKSMKDA 1196



 Score =  356 bits (914), Expect = 3e-95
 Identities = 208/460 (45%), Positives = 277/460 (60%), Gaps = 23/460 (5%)
 Frame = -1

Query: 1418 KLKKVTVADIIEKIEVNVVPFSVYKQQVTTVFKLKIKVFGPEHFPPYMDITLEDCMQTLD 1239
            KLKK+TVADII+ ++V+VVP +V   QV +++KL +K++  + +P Y DITL+D  +TL 
Sbjct: 1202 KLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLR 1261

Query: 1238 VLFVRELEDSIENHLIMVSKVSGITNMGRESEA-VNXXXXXXXXXXXDSSKQSHXXXXXX 1062
            V FVRELED+I+NH+ ++SK+SGI     + ++  +           +S K+        
Sbjct: 1262 VNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDD 1321

Query: 1061 XXXXXXXXXXXXXDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAEGSESEGDDVG 882
                         DLG DAQKRK Q TDE+DY EDG E ET   E  +    + +G DV 
Sbjct: 1322 EDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDY-EDGPEEETHDGELSEEIEGDEDGSDVD 1380

Query: 881  NKENDQGTDGEPQILDAEEEPKS-VLASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFF 705
              EN             E+  KS  +  K + KRE                  + DR  F
Sbjct: 1381 ANENYNNVTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTK---------KYDRAIF 1431

Query: 704  VEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCS--------VIDYNRD 549
            VEAKG  FE+H RFT EPHI+L+++ ++ AK V I+  G +  C         VI Y +D
Sbjct: 1432 VEAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITCKESGVIYYGKD 1491

Query: 548  AK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARAT 405
             +            + ALQT+GV F  FW++ DDLD+ +I SN++H +L  YGVEAAR T
Sbjct: 1492 GRKRIEISASEKEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARET 1551

Query: 404  IINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRHG-IASSTSPFSKMSFETAAK 228
            II EV+ VF +YGI VNIRHLTLIAD+MTHTG+ RP +R G IA STSPF KM FETA  
Sbjct: 1552 IIREVQNVFKSYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGN 1611

Query: 227  FIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 108
            FIV+AAYHG+VD+LE+PSARICLGLPVK+GTG  DL+Q++
Sbjct: 1612 FIVEAAYHGQVDNLETPSARICLGLPVKMGTGCHDLIQKL 1651