BLASTX nr result

ID: Papaver23_contig00000039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000039
         (1392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus c...   455   e-125
ref|XP_002870688.1| succinate dehydrogenase 2-2 [Arabidopsis lyr...   448   e-123
gb|AFK34767.1| unknown [Medicago truncatula]                          448   e-123
ref|NP_198881.1| succinate dehydrogenase [ubiquinone] iron-sulfu...   447   e-123
gb|AAM65047.1| succinate dehydrogenase iron-protein subunit-like...   447   e-123

>ref|XP_002526944.1| succinate dehydrogenase, putative [Ricinus communis]
            gi|223533696|gb|EEF35431.1| succinate dehydrogenase,
            putative [Ricinus communis]
          Length = 284

 Score =  455 bits (1170), Expect = e-125
 Identities = 213/250 (85%), Positives = 224/250 (89%)
 Frame = +2

Query: 269  YNAPPPQEQKTEPKATDKSNHKTFQIYRWNPDNPTKPELKNYSIDLKDCGPMVLDALIKI 448
            ++A   + QK EPKA+  ++ KTFQIYRWNPDNP+KP L++Y IDLK+CGPMVLDALIKI
Sbjct: 30   FHASEAEAQKVEPKASSTASLKTFQIYRWNPDNPSKPTLQDYKIDLKECGPMVLDALIKI 89

Query: 449  KNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIEPNEKESTITPLPHMFVIKDLV 628
            KNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKI      STITPLPHMFVIKDLV
Sbjct: 90   KNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSGSTSSTITPLPHMFVIKDLV 149

Query: 629  VDMTNFYNQYKSIEPWLKRKNPAEEKGKEIYQSKKDRAKLDGMYECILCACCSTSCPSYW 808
            VDMTNFYNQYKSIEPWLKRKNP    GKEI QSKKDRAKLDGMYECILCACCSTSCPSYW
Sbjct: 150  VDMTNFYNQYKSIEPWLKRKNPPPVDGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYW 209

Query: 809  WNPESYLGPAALLHANRWISDSRDEYTDERLAAINDEFKLYRCHTILNCARACPKGLNPG 988
            WNPESYLGPAALLHANRWISDSRDEYT+ERL AINDEFKLYRCHTILNCARACPKGLNPG
Sbjct: 210  WNPESYLGPAALLHANRWISDSRDEYTNERLDAINDEFKLYRCHTILNCARACPKGLNPG 269

Query: 989  KQINTIKARQ 1018
            KQI  IK  Q
Sbjct: 270  KQIMHIKQLQ 279


>ref|XP_002870688.1| succinate dehydrogenase 2-2 [Arabidopsis lyrata subsp. lyrata]
            gi|297316524|gb|EFH46947.1| succinate dehydrogenase 2-2
            [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  448 bits (1153), Expect = e-123
 Identities = 216/263 (82%), Positives = 227/263 (86%), Gaps = 10/263 (3%)
 Frame = +2

Query: 260  TRLYNAP---PPQEQKTEPKATDKSNH-------KTFQIYRWNPDNPTKPELKNYSIDLK 409
            +RLY A    P +   T  +A  K++        KTFQIYRWNPDNP KPEL++Y IDLK
Sbjct: 15   SRLYTAARLIPARWTSTGSEAQSKASTGGGGASLKTFQIYRWNPDNPGKPELQDYQIDLK 74

Query: 410  DCGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIEPNEKESTI 589
            DCGPMVLDALIKIKNE+DP+LTFRRSCREGICGSCAMNIDGCNGLACLTKIE   KE+TI
Sbjct: 75   DCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIESGSKETTI 134

Query: 590  TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPAEEKGKEIYQSKKDRAKLDGMYECI 769
            TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPA   GKEI QSKKDRAKLDGMYECI
Sbjct: 135  TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPASVPGKEILQSKKDRAKLDGMYECI 194

Query: 770  LCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTDERLAAINDEFKLYRCHTIL 949
            LCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYT ERL AI+DEFKLYRCHTIL
Sbjct: 195  LCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYRCHTIL 254

Query: 950  NCARACPKGLNPGKQINTIKARQ 1018
            NCARACPKGLNPGKQI  IK  Q
Sbjct: 255  NCARACPKGLNPGKQITHIKQLQ 277


>gb|AFK34767.1| unknown [Medicago truncatula]
          Length = 278

 Score =  448 bits (1152), Expect = e-123
 Identities = 211/250 (84%), Positives = 223/250 (89%)
 Frame = +2

Query: 272  NAPPPQEQKTEPKATDKSNHKTFQIYRWNPDNPTKPELKNYSIDLKDCGPMVLDALIKIK 451
            +A   Q Q+  PKA D +  K FQIYRWNPD P+KPELK   I+LK+CGPMVLDALIKIK
Sbjct: 27   HASEAQAQQASPKARDTTVLKKFQIYRWNPDTPSKPELKECEINLKECGPMVLDALIKIK 86

Query: 452  NEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIEPNEKESTITPLPHMFVIKDLVV 631
            N+IDP+LTFRRSCREGICGSCAMNIDGCNGLACLTKI     +STITPLPHMFVIKDLVV
Sbjct: 87   NDIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPDAGMDSTITPLPHMFVIKDLVV 146

Query: 632  DMTNFYNQYKSIEPWLKRKNPAEEKGKEIYQSKKDRAKLDGMYECILCACCSTSCPSYWW 811
            DMTNFYNQYKSIEPWLKRK+PAEE GKEI QSKKDRAKLDGMYECILCACCSTSCPSYWW
Sbjct: 147  DMTNFYNQYKSIEPWLKRKSPAEEDGKEIKQSKKDRAKLDGMYECILCACCSTSCPSYWW 206

Query: 812  NPESYLGPAALLHANRWISDSRDEYTDERLAAINDEFKLYRCHTILNCARACPKGLNPGK 991
            NPESYLGPAALLHANRWISDSRDEYT ERL AINDEFKLYRCHTILNCARACP+GLNPGK
Sbjct: 207  NPESYLGPAALLHANRWISDSRDEYTKERLEAINDEFKLYRCHTILNCARACPEGLNPGK 266

Query: 992  QINTIKARQP 1021
            QI  IK+ QP
Sbjct: 267  QIAHIKSLQP 276


>ref|NP_198881.1| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2
            [Arabidopsis thaliana]
            gi|110808205|sp|Q8LB02.2|DHSB2_ARATH RecName:
            Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
            subunit 2, mitochondrial; AltName: Full=Iron-sulfur
            subunit of complex II; Short=Ip; Flags: Precursor
            gi|9758093|dbj|BAB08537.1| succinate dehydrogenase
            iron-protein subunit [Arabidopsis thaliana]
            gi|18377692|gb|AAL66996.1| putative succinate
            dehydrogenase iron-protein subunit [Arabidopsis thaliana]
            gi|21689851|gb|AAM67569.1| putative succinate
            dehydrogenase iron-protein subunit [Arabidopsis thaliana]
            gi|332007195|gb|AED94578.1| succinate dehydrogenase
            [ubiquinone] iron-sulfur subunit 2 [Arabidopsis thaliana]
          Length = 280

 Score =  447 bits (1151), Expect = e-123
 Identities = 208/229 (90%), Positives = 214/229 (93%)
 Frame = +2

Query: 332  KTFQIYRWNPDNPTKPELKNYSIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGS 511
            KTFQIYRWNPDNP KPEL++Y IDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGS
Sbjct: 49   KTFQIYRWNPDNPGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGS 108

Query: 512  CAMNIDGCNGLACLTKIEPNEKESTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 691
            CAMNIDGCNGLACLTKIE   KE+TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN
Sbjct: 109  CAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 168

Query: 692  PAEEKGKEIYQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISD 871
            PA   GKEI QSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISD
Sbjct: 169  PASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISD 228

Query: 872  SRDEYTDERLAAINDEFKLYRCHTILNCARACPKGLNPGKQINTIKARQ 1018
            SRDEYT ERL AI+DEFKLYRCHTILNCARACPKGLNPGKQI  IK  Q
Sbjct: 229  SRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 277


>gb|AAM65047.1| succinate dehydrogenase iron-protein subunit-like [Arabidopsis
            thaliana]
          Length = 280

 Score =  447 bits (1151), Expect = e-123
 Identities = 208/229 (90%), Positives = 214/229 (93%)
 Frame = +2

Query: 332  KTFQIYRWNPDNPTKPELKNYSIDLKDCGPMVLDALIKIKNEIDPTLTFRRSCREGICGS 511
            KTFQIYRWNPDNP KPEL++Y IDLKDCGPMVLDALIKIKNE+DP+LTFRRSCREGICGS
Sbjct: 49   KTFQIYRWNPDNPGKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGS 108

Query: 512  CAMNIDGCNGLACLTKIEPNEKESTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 691
            CAMNIDGCNGLACLTKIE   KE+TITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN
Sbjct: 109  CAMNIDGCNGLACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKN 168

Query: 692  PAEEKGKEIYQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISD 871
            PA   GKEI QSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISD
Sbjct: 169  PASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISD 228

Query: 872  SRDEYTDERLAAINDEFKLYRCHTILNCARACPKGLNPGKQINTIKARQ 1018
            SRDEYT ERL AI+DEFKLYRCHTILNCARACPKGLNPGKQI  IK  Q
Sbjct: 229  SRDEYTKERLEAIDDEFKLYRCHTILNCARACPKGLNPGKQITHIKQLQ 277


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