BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000008
         (1873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    54   3e-08
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    54   9e-08
emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera]    49   3e-06
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    51   3e-06
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    46   6e-06

>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 732

 Score = 53.5 bits (127), Expect(2) = 3e-08
 Identities = 24/53 (45%), Positives = 38/53 (71%)
 Frame = -2

Query: 1278 WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV**LIREANS 1120
            WG   +QRKQH ISW +  + +S+G LG+R ++ +NKAL+SK+   LI++ +S
Sbjct: 352  WGSSVTQRKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHS 404



 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 18/55 (32%), Positives = 33/55 (60%)
 Frame = -1

Query: 1432 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPSMPQVTRKKIDQPVGAF 1268
            +R+  WK RFL+ AG+ TL  +VL+ IP+   + +   ++P+ T   +D+   +F
Sbjct: 299  TRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTI---ALPKSTLDGLDKVSRSF 350


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
            gi|7268307|emb|CAB78601.1| reverse transcriptase like
            protein [Arabidopsis thaliana]
          Length = 929

 Score = 53.5 bits (127), Expect(2) = 9e-08
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = -2

Query: 1338 VPTCIIPQCLKSLARRLINRWGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALI 1159
            +P  ++ Q L  ++R  +  WG    +RKQH +SW K  R K+ G LGLR+SK +N+AL+
Sbjct: 608  LPASLLEQ-LDKVSRNFL--WGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALL 664

Query: 1158 SKL 1150
            +K+
Sbjct: 665  AKV 667



 Score = 30.8 bits (68), Expect(2) = 9e-08
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -1

Query: 1432 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPS 1316
            SR++ WK R L+ AG+ TL  +VL  IP+   +++  P+
Sbjct: 572  SRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPA 610


>emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera]
          Length = 1851

 Score = 48.5 bits (114), Expect(2) = 3e-06
 Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
 Frame = -2

Query: 1308 KSLARRL--INR---WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV 1147
            KS+ARRL  + R   WG  +++RK H I W+    +KS+G LGLR    LNKAL+ K +
Sbjct: 1456 KSVARRLDKVQRDFLWGGGSAERKAHLIKWEAICEDKSKGGLGLRKLVLLNKALLGKWI 1514



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -1

Query: 1429 RVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPS---MPQVTRKKIDQ 1283
            R+  WK+++++  G+ TL+ S LA +P      ++H S   MP+   +++D+
Sbjct: 1419 RLARWKRQYISKGGRITLIRSALASMP------IYHMSLFRMPKSVARRLDK 1464


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 51.2 bits (121), Expect(2) = 3e-06
 Identities = 21/53 (39%), Positives = 37/53 (69%)
 Frame = -2

Query: 1278 WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV**LIREANS 1120
            WG    ++KQH +SW K  + K++G +GLRS++ +NKAL++K+   L+++  S
Sbjct: 690  WGSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKES 742



 Score = 28.1 bits (61), Expect(2) = 3e-06
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 1432 SRVNSWKKRFLTHAGKPTLVHSVLALIPM 1346
            +R+  WK R L+ AG+ TL  +VL+ IP+
Sbjct: 637  ARLAGWKGRSLSLAGRITLTKAVLSSIPV 665


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 46.2 bits (108), Expect(2) = 6e-06
 Identities = 20/53 (37%), Positives = 35/53 (66%)
 Frame = -2

Query: 1278 WGHLASQRKQHYISWDKFSREKSQGELGLRSSKHLNKALISKLV**LIREANS 1120
            WG    ++KQH ++W+K    K  G LG+RSS+ +N AL++K+   L+++ +S
Sbjct: 282  WGSSTEKKKQHLLAWNKIYCTKQAGGLGIRSSRAMNTALLAKIGWRLLQDKSS 334



 Score = 32.0 bits (71), Expect(2) = 6e-06
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = -1

Query: 1432 SRVNSWKKRFLTHAGKPTLVHSVLALIPMCLRANLHHPSMPQVTRKKIDQ 1283
            SR+  WK R L+ AG+ TL  SVL+ IP+   + +   ++P+ T    D+
Sbjct: 229  SRLAGWKGRMLSLAGRLTLTKSVLSSIPIHTMSTI---ALPKATLDGFDR 275