BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037481
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC28197.1| contains similarity to reverse transcriptases [Ar...    84   2e-14
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    71   1e-10
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    69   5e-10
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              67   3e-09
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    61   1e-07

>gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267156|emb|CAB77868.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1077

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 62/182 (34%), Positives = 88/182 (48%), Gaps = 4/182 (2%)
 Frame = +1

Query: 1   EIVECITNHFHDIATTVNPMMDRYMIDLIPSCITQLDNEMLCNTPTETEIKQTLIIMEPD 180
           EI+E I+++F DI T+        + + +  CIT   N  L + PT  EIKQ  + + PD
Sbjct: 360 EIIETISDYFQDIFTSQEGDRTSVVAEALSPCITTDMNNTLISLPTVAEIKQACLSIHPD 419

Query: 181 KIPGPNGFPSKIF-NKIGKPQGLIWSLWFRFFXXXXXXXXXXXXHSFL*F*KL*TRLPQS 357
           K PG +GF +  F +        I +    FF            H  L   K+    PQ 
Sbjct: 420 KAPGRDGFSASFFQSNWSTVSEEITAEVQAFFISEILPQKINHTHVRL-IPKI--PAPQK 476

Query: 358 SSDR---*L*QTSYKIISKLMEGRMKSLLEKIISPYQSAFIPGRKISKNITLAHEIIHKI 528
            SD     L    YKII+KL+  R++ +L   IS  QSAF+P R IS N+ + HE +H +
Sbjct: 477 VSDYRPIALCSVYYKIIAKLLAKRLQPILHSCISENQSAFVPQRAISDNVLITHEALHYL 536

Query: 529 KN 534
           KN
Sbjct: 537 KN 538


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
 Frame = +1

Query: 22   NHFHDIATTVNPMMDRYMIDLIPSCITQLDNEMLCNTPTETEIKQTLIIMEPDKIPGPNG 201
            N+F D+ TT        +I  I   +T+  N  L  + T+ E++  +  +  D+ PG +G
Sbjct: 753  NYFADLFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDG 812

Query: 202  FPSKIFNKIGKPQGLIWSLWFRFFXXXXXXXXXXXXHSFL*F*KL*TRLPQSSSDR*--- 372
            F +  ++ +    G    L  R F                   K+    P+  SD     
Sbjct: 813  FTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIID--PKHMSDYRPIS 870

Query: 373  L*QTSYKIISKLMEGRMKSLLEKIISPYQSAFIPGRKISKNITLAHEIIHKIKN 534
            L   SYKIISK++  R+K  L  +IS  Q+AF+PG+ IS N+ +AHE++H +K+
Sbjct: 871  LCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKS 924


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
 Frame = +1

Query: 1   EIVECITNHFHDIATTVNPMMDRYMIDLIPSCITQLDNEMLCNTPTETEIKQTLIIMEPD 180
           +I     ++F ++ TT NP +    +  +   IT   N++L    TE E++  L ++ P+
Sbjct: 168 DIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPE 227

Query: 181 KIPGPNGFPSKIFNKIGKP-QGLIWSLWFRFFXXXXXXXXXXXXHSFL*F*KL*TRLPQS 357
           K PGP+G  +  F K     +  + SL   F             +  L        +P++
Sbjct: 228 KAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICL--------IPKT 279

Query: 358 SSDR*L*Q--------TSYKIISKLMEGRMKSLLEKIISPYQSAFIPGRKISKNITLAHE 513
                + +          YK+ISK++  R+K++L  +IS  QSAF+ GR IS NI +A E
Sbjct: 280 ERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQE 339

Query: 514 IIHKIK 531
           + H ++
Sbjct: 340 MFHGLR 345


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 3/180 (1%)
 Frame = +1

Query: 1   EIVECITNHFHDIATTVNPMMDRYMIDLIPSCITQLDNEMLCNTPTETEIKQTLIIMEPD 180
           ++     ++F  +    NP      +  + + IT   N+ L    TE E++  L +M P+
Sbjct: 234 DVQHIAVSYFETLFNKSNPQNIAESLSEVKTLITDQINDFLTTPATEDEVRAALFLMHPE 293

Query: 181 KIPGPNGFPSKIFNKIGKPQGLIWSLWFRFFXXXXXXXXXXXXHSFL*F*KL*TRLPQSS 360
           K PGP+G  +  F K      +        F             +     K  T  P   
Sbjct: 294 KAPGPDGMTALFFQKPWATIKMDMLFLVNSFLQDGVFDKQLNTTNICLIPK--TERPTRM 351

Query: 361 SDR*---L*QTSYKIISKLMEGRMKSLLEKIISPYQSAFIPGRKISKNITLAHEIIHKIK 531
           ++     L    YKIISK++  R+K +L  +IS   SAF+ GR IS NI +A E+ H ++
Sbjct: 352 TELRPISLCNVGYKIISKILCQRLKKILPSLISETHSAFVEGRLISDNILIAQEMFHGLR 411


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 3/163 (1%)
 Frame = +1

Query: 52  NPMMDRYMIDLIPSCITQLDNEMLCNTPTETEIKQTLIIMEPDKIPGPNGFPSKIFNKIG 231
           NP +    +  +P  IT+  N+ L    +  E+K+ L  + PDK PGP+G  +  +    
Sbjct: 348 NPQVFDSALQEVPVLITEEMNKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYW 407

Query: 232 KPQGLIWSLWFRFFXXXXXXXXXXXXHSFL*F*KL*TRLPQSSSDR*---L*QTSYKIIS 402
              G       + F             +     K  T  P+  ++     L   SYK+IS
Sbjct: 408 DLTGPDLIKLVQNFHSTGFFDERLNETNICLIPK--TERPRKMAEFRPISLCNVSYKVIS 465

Query: 403 KLMEGRMKSLLEKIISPYQSAFIPGRKISKNITLAHEIIHKIK 531
           K++  R+K LL ++IS  QSAF+  R I+ NI +A E  H ++
Sbjct: 466 KVLSSRLKRLLPELISETQSAFVAERLITDNILIAQENFHALR 508