BLASTX nr result

ID: Papaver22_contig00037401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037401
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   188   3e-46
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   185   3e-45
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   184   8e-45
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...   184   8e-45
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   179   2e-43

>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  188 bits (478), Expect = 3e-46
 Identities = 99/154 (64%), Positives = 121/154 (78%), Gaps = 1/154 (0%)
 Frame = -3

Query: 491 HNSSKVCALLNLLVAARNDNPSVKSVVFSQFRKMLVLLVEPLKSAGFGVLRLDSTTTVKR 312
           + SSKV ALLNLL+AAR+ NP+ KSV+FSQF+KMLVLL EPLK+AGF +LRLD T   K+
Sbjct: 187 NTSSKVSALLNLLMAARDKNPTAKSVIFSQFQKMLVLLEEPLKAAGFKILRLDGTMNAKK 246

Query: 311 RDDVMKIFTNQDSNSPTVLLVEFKSSETGIDLTAASRAYLLEPWLNPAVEEQAMDRLHRI 132
           +  V+K F     N PTVLL   K+S  GI+L AAS+ YLLEPW NPAVEEQAMDR+HRI
Sbjct: 247 KAQVIKEFGIPGPNGPTVLLASLKASCAGINLAAASKVYLLEPWWNPAVEEQAMDRVHRI 306

Query: 131 GQ-EDMKIVRLITRNAIEERILQLHEWQRNLEKE 33
           GQ ED+ +VRLITRN+IEERIL++ E ++ L KE
Sbjct: 307 GQKEDVTVVRLITRNSIEERILEMQERKKKLAKE 340


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  185 bits (470), Expect = 3e-45
 Identities = 100/152 (65%), Positives = 116/152 (76%), Gaps = 1/152 (0%)
 Frame = -3

Query: 485  SSKVCALLNLLVAARNDNPSVKSVVFSQFRKMLVLLVEPLKSAGFGVLRLDSTTTVKRRD 306
            SSKV  LL  L A+R+ NPS KSVVFSQFRKML+LL +PLK+AGF  LRLD +   KRR 
Sbjct: 699  SSKVLTLLKFLSASRDQNPSTKSVVFSQFRKMLLLLEQPLKAAGFKTLRLDGSMNAKRRA 758

Query: 305  DVMKIFTNQDSNSPTVLLVEFKSSETGIDLTAASRAYLLEPWLNPAVEEQAMDRLHRIGQ 126
             V++ F     N PTVLL   K+S  GI+LTAASR YLLEPW NPAVEEQAMDR+HRIGQ
Sbjct: 759  QVIEEFGAPGPNGPTVLLASLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQ 818

Query: 125  -EDMKIVRLITRNAIEERILQLHEWQRNLEKE 33
             ED+KIVRLI RN+IEERIL+L E ++ L KE
Sbjct: 819  KEDVKIVRLIARNSIEERILELQERKKKLAKE 850


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  184 bits (466), Expect = 8e-45
 Identities = 94/162 (58%), Positives = 123/162 (75%), Gaps = 1/162 (0%)
 Frame = -3

Query: 485  SSKVCALLNLLVAARNDNPSVKSVVFSQFRKMLVLLVEPLKSAGFGVLRLDSTTTVKRRD 306
            SSKV ALL+LL+A+R +NP+ KSVVFSQFRKML+LL  PLK+AGF +LRLD   TVK+R 
Sbjct: 687  SSKVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRT 746

Query: 305  DVMKIFTNQDSNSPTVLLVEFKSSETGIDLTAASRAYLLEPWLNPAVEEQAMDRLHRIGQ 126
             V+  F N +   P VLL   K+S TGI+LTAASR YL +PW NPAVEEQAMDR+HRIGQ
Sbjct: 747  QVIGEFGNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQ 806

Query: 125  -EDMKIVRLITRNAIEERILQLHEWQRNLEKEKGSSNNKLNQ 3
             +++K++R+I RN+IEER+L+L + ++NL  E      K ++
Sbjct: 807  KQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDE 848


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score =  184 bits (466), Expect = 8e-45
 Identities = 94/162 (58%), Positives = 123/162 (75%), Gaps = 1/162 (0%)
 Frame = -3

Query: 485  SSKVCALLNLLVAARNDNPSVKSVVFSQFRKMLVLLVEPLKSAGFGVLRLDSTTTVKRRD 306
            SSKV ALL+LL+A+R +NP+ KSVVFSQFRKML+LL  PLK+AGF +LRLD   TVK+R 
Sbjct: 706  SSKVSALLSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRT 765

Query: 305  DVMKIFTNQDSNSPTVLLVEFKSSETGIDLTAASRAYLLEPWLNPAVEEQAMDRLHRIGQ 126
             V+  F N +   P VLL   K+S TGI+LTAASR YL +PW NPAVEEQAMDR+HRIGQ
Sbjct: 766  QVIGEFGNPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQ 825

Query: 125  -EDMKIVRLITRNAIEERILQLHEWQRNLEKEKGSSNNKLNQ 3
             +++K++R+I RN+IEER+L+L + ++NL  E      K ++
Sbjct: 826  KQEVKMIRMIARNSIEERVLELQQKKKNLANEAFKRRQKKDE 867


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316976|gb|EFH47398.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  179 bits (454), Expect = 2e-43
 Identities = 91/162 (56%), Positives = 123/162 (75%), Gaps = 1/162 (0%)
 Frame = -3

Query: 485  SSKVCALLNLLVAARNDNPSVKSVVFSQFRKMLVLLVEPLKSAGFGVLRLDSTTTVKRRD 306
            SSKV ALL+LL+A+R ++P+ KSVVFSQFRKML+LL  PLK+AGF +LRLD   T+K+R 
Sbjct: 686  SSKVSALLSLLIASRQESPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTLKKRT 745

Query: 305  DVMKIFTNQDSNSPTVLLVEFKSSETGIDLTAASRAYLLEPWLNPAVEEQAMDRLHRIGQ 126
             V+  F N +   P VLL   K+S  GI+LTAASR YLL+PW NPAVEEQAMDR+HRIGQ
Sbjct: 746  QVIGEFGNPELTGPVVLLASLKASGAGINLTAASRVYLLDPWWNPAVEEQAMDRIHRIGQ 805

Query: 125  -EDMKIVRLITRNAIEERILQLHEWQRNLEKEKGSSNNKLNQ 3
             +++K++R+I R++IEER+L+L + ++NL  E      K ++
Sbjct: 806  KQEVKMIRMIARDSIEERVLELQQKKKNLANEAFKRRQKKDE 847


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