BLASTX nr result

ID: Papaver22_contig00037370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037370
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28908.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|NP_171855.1| pentatricopeptide repeat-containing protein [Ar...   184   6e-45
ref|XP_002892169.1| pentatricopeptide repeat-containing protein ...   184   6e-45
dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]           184   6e-45
ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44

>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  186 bits (471), Expect = 2e-45
 Identities = 93/184 (50%), Positives = 124/184 (67%), Gaps = 19/184 (10%)
 Frame = +2

Query: 5   SKTFPPNSRFVSTSFPPPEWIEPF-------------------RILNLLDDSPTMESNLD 127
           + T   NSR+V T+  PPEW+EP                    +IL LLD S  MESNLD
Sbjct: 48  TSTVGSNSRWVFTTPIPPEWVEPLYDLSDLASNPQPQPSPWVNQILKLLDGSVNMESNLD 107

Query: 128 DYCQNFLIKLSPHFVTQLLMSSQLKQNPKLALKFFYWAGKQRNNYSHSLDSYVTLIGILA 307
            YC  FLIKLSP+FV  +L S  ++  P +A +FF+WAGKQ+N Y H ++ YV+LI +L+
Sbjct: 108 SYCSKFLIKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKN-YIHKIECYVSLIDVLS 166

Query: 308 SVRDIEGVKNLVGEVRDRGFSMTISTSNALIKSFGVLGMVEELLWVWRRMKESGIEPNLF 487
              D + V+ + GE +++GF MT+  +N+LI+SFG LGMVEELLWVWRRMKESGIEP+L+
Sbjct: 167 LSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLY 226

Query: 488 TYNF 499
           T+NF
Sbjct: 227 TFNF 230


>ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
           gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18
           [Arabidopsis thaliana] gi|332189465|gb|AEE27586.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 660

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 20/176 (11%)
 Frame = +2

Query: 32  FVSTSFPPPEWIEPF--------------------RILNLLDDSPTMESNLDDYCQNFLI 151
           F S+S PPPEWIEPF                    +ILNLLD S +MESNLD +C+ FLI
Sbjct: 53  FNSSSLPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLI 112

Query: 152 KLSPHFVTQLLMSSQLKQNPKLALKFFYWAGKQRNNYSHSLDSYVTLIGILASVRDIEGV 331
           KLSP+FV+ +L S ++++ P +A  FF W+ KQ+  Y+H+L+ YV+L+ +LA  +D++ +
Sbjct: 113 KLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKK-YTHNLECYVSLVDVLALAKDVDRI 171

Query: 332 KNLVGEVRDRGFSMTISTSNALIKSFGVLGMVEELLWVWRRMKESGIEPNLFTYNF 499
           + +  E++   F MT+S +NALIKSFG LGMVEELLWVWR+MKE+GIEP L+TYNF
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227


>ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338011|gb|EFH68428.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 662

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/176 (51%), Positives = 123/176 (69%), Gaps = 20/176 (11%)
 Frame = +2

Query: 32  FVSTSFPPPEWIEPF--------------------RILNLLDDSPTMESNLDDYCQNFLI 151
           F S+S PPPEWIEPF                    +ILNLLD S +MESNLD +C+ FLI
Sbjct: 53  FNSSSLPPPEWIEPFNDVSDLVKSNRNLQPSPWVSQILNLLDGSASMESNLDGFCRKFLI 112

Query: 152 KLSPHFVTQLLMSSQLKQNPKLALKFFYWAGKQRNNYSHSLDSYVTLIGILASVRDIEGV 331
           KLSP+FV+ +L S ++++ P +A  FF W+ KQ+  Y+H+L+ YV+L+ +LA  +D++ +
Sbjct: 113 KLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKK-YTHNLECYVSLVDVLALAKDVDRI 171

Query: 332 KNLVGEVRDRGFSMTISTSNALIKSFGVLGMVEELLWVWRRMKESGIEPNLFTYNF 499
           + +  E+R   F MT+S  N+LIKSFG LGMVEELLWVWR+MKE+GIEP L+TYNF
Sbjct: 172 RFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227


>dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 20/176 (11%)
 Frame = +2

Query: 32  FVSTSFPPPEWIEPF--------------------RILNLLDDSPTMESNLDDYCQNFLI 151
           F S+S PPPEWIEPF                    +ILNLLD S +MESNLD +C+ FLI
Sbjct: 35  FNSSSLPPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLI 94

Query: 152 KLSPHFVTQLLMSSQLKQNPKLALKFFYWAGKQRNNYSHSLDSYVTLIGILASVRDIEGV 331
           KLSP+FV+ +L S ++++ P +A  FF W+ KQ+  Y+H+L+ YV+L+ +LA  +D++ +
Sbjct: 95  KLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKK-YTHNLECYVSLVDVLALAKDVDRI 153

Query: 332 KNLVGEVRDRGFSMTISTSNALIKSFGVLGMVEELLWVWRRMKESGIEPNLFTYNF 499
           + +  E++   F MT+S +NALIKSFG LGMVEELLWVWR+MKE+GIEP L+TYNF
Sbjct: 154 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 209


>ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  181 bits (460), Expect = 4e-44
 Identities = 92/184 (50%), Positives = 126/184 (68%), Gaps = 22/184 (11%)
 Frame = +2

Query: 14  FPPNSRFVSTS--FPPPEWIEPF--------------------RILNLLDDSPTMESNLD 127
           F  N RFV T+   PPPEWIEPF                    +ILNLLD S  ME NLD
Sbjct: 43  FSQNFRFVFTNTLLPPPEWIEPFVDVSDVISSSQPLDPSPWVAQILNLLDGSSNMEHNLD 102

Query: 128 DYCQNFLIKLSPHFVTQLLMSSQLKQNPKLALKFFYWAGKQRNNYSHSLDSYVTLIGILA 307
            +C+ F +KLSP+FVT +L S +L++ P++A++FF+WAGKQ+  Y H ++ +V+LI +L 
Sbjct: 103 SFCRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKK-YVHKIECHVSLIELLT 161

Query: 308 SVRDIEGVKNLVGEVRDRGFSMTISTSNALIKSFGVLGMVEELLWVWRRMKESGIEPNLF 487
              D+  ++ +  E++DRG  MT S +N+LIKSFG LG+VEELLWVWRRMKE+GI+P+L+
Sbjct: 162 FSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLY 221

Query: 488 TYNF 499
           TYNF
Sbjct: 222 TYNF 225


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