BLASTX nr result

ID: Papaver22_contig00037354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037354
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    80   4e-13
gb|AFK38936.1| unknown [Medicago truncatula]                           71   2e-10
ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia...    67   3e-09
ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia...    67   5e-09
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    66   7e-09

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
 Frame = -1

Query: 590 ILWNLWKQ*CITVFQGRLPYPRTIIHIIRQFCMHCNLGGTANHQSSTTSSSGPKQLEMHW 411
           +LW +W++    V+ G+L      + + R+          A   S+TT      Q  + W
Sbjct: 2   MLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQ----AARNSATTQVQQSPQDTIAW 57

Query: 410 SAPPSQWMKLNFDAAFDIDTHSVGLGLILRDSTGKFM-AGRTLKVTATSAEQAEGLALPE 234
             P + ++K N DAA   + +  G G+ +RD  G+F+ A           ++AE + L +
Sbjct: 58  QPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRD 117

Query: 233 AVLWFKSLPFSGSCPKVMFEGDCKNVIIALSSSKRPIELANQPLIGDCRSLLSSLTTFSC 54
           A+LW   L  S     V  E DCK V+ ++   K   +     +I DCRSLL   T F  
Sbjct: 118 AILWLGQLELS----NVQLELDCKLVVDSI-YDKNNNQAEFGSIIDDCRSLLQQFTNFKI 172

Query: 53  VFVHRECNNAALELAKL 3
            FV R+ N  A   A++
Sbjct: 173 SFVRRQANVVAHSFARV 189


>gb|AFK38936.1| unknown [Medicago truncatula]
          Length = 297

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 67/226 (29%), Positives = 95/226 (42%), Gaps = 2/226 (0%)
 Frame = -1

Query: 674 IQEWLQSWNHKNRIISLQSPVRLHLAAAILWNLWKQ*CITVFQGRLPYPRTIIHIIRQFC 495
           +  WLQSW      +S + P+ + L    LW +W      +F   +  PR +      F 
Sbjct: 65  LNAWLQSW------LSAKEPLAVQLFCVCLWKIWFFRNQAIFNQVVFEPRMVAASAHDFV 118

Query: 494 MHCNLGGTANHQSSTTSSSGPKQLEMHWSAPPSQWMKLNFDAAFDIDTHSVGLGLILRDS 315
              NL   AN   S      P Q+   W APP+ ++K N DA  D     V  GL++R+ 
Sbjct: 119 SEFNL---ANPTRSVDRLQIPAQV---WIAPPTDFLKANIDAGRD-KHGKVTWGLVIRNH 171

Query: 314 TGK--FMAGRTLKVTATSAEQAEGLALPEAVLWFKSLPFSGSCPKVMFEGDCKNVIIALS 141
             +  F A ++  + A      E L L   +     L  S     VMFE D   V+   +
Sbjct: 172 ESEVLFAATQSPDIMADPL-LVETLGLRWGIQTVLELQLSN----VMFELDASVVVKCFN 226

Query: 140 SSKRPIELANQPLIGDCRSLLSSLTTFSCVFVHRECNNAALELAKL 3
                  ++  P I DC  L  SL   S  FV+R CN AA ELA++
Sbjct: 227 GLSTIASIS--PFISDCHDLFGSLVGSSVSFVNRSCNVAAHELAQV 270


>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
 Frame = -1

Query: 590 ILWNLWKQ*CITVFQGRLPYPRTIIHIIRQFCMHCNLGGTANHQSSTTSSSGPKQLEMHW 411
           +LW LWK     VF+GR    + ++           +   A  +S  T     +     W
Sbjct: 363 LLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEA--ESCGTKPQVNRSSCGRW 420

Query: 410 SAPPSQWMKLNFDAAFDIDTHSVGLGLILRDSTG--KFMAGRTLKVTATSAEQAEGLALP 237
             PP QW+K N DA ++ D    G+G +LR+  G  K+M  R L     S  +AE  A+ 
Sbjct: 421 RPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALP-KLKSVLEAELEAMR 479

Query: 236 EAVLWFKSLPFSGSCPKVMFEGDCKNVIIALSSSKRPIELANQPLIGDCRSLLSSLTTFS 57
            AVL      ++     V+FE D + +I  L++ +  I  + +P I D + LLS  T   
Sbjct: 480 WAVLSLSRFQYN----YVIFESDSQVLIEILNNDE--IWPSLKPTIQDLQRLLSQFTEVK 533

Query: 56  CVFVHRECNNAALELAK 6
            VF+ RE N  A  +A+
Sbjct: 534 FVFIPREGNTLAERVAR 550


>ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
           protein [Arabidopsis thaliana]
           gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
 Frame = -1

Query: 623 QSPVRLHLAAAILWNLWKQ*CITVFQGRLPYPRTIIHIIRQFCMHCNLGGT----ANHQS 456
           + P   +LA  ILW LWK     VFQ +    +  +   R          T     N Q 
Sbjct: 112 RQPQLFNLAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQV 171

Query: 455 STTSSSGPKQLEMHWSAPPSQWMKLNFDAAFDIDTHSVGLGLILRDSTGKFM-AGRTLKV 279
            ++    P      W  PPS W+K N+D AF+  T +   G ++RD  G +M +G+ +  
Sbjct: 172 HSSRHQQPTMARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGS 231

Query: 278 TATSAEQAEGLALPEAVLWFKSLPFSGSCPKVMFEGDCKNVIIALSSSK 132
           T + + ++E  AL  A+       +S    KV+FEGD K V   +++ K
Sbjct: 232 TTSDSLESEFQALIIAM----QHAWSQGYRKVIFEGDSKQVEELMNNEK 276


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
 Frame = -1

Query: 419 MHWSAPPSQWMKLNFDAAFDIDTHSVGLGLILRDSTGKFMAGRTLKVT-ATSAEQAEGLA 243
           M W+ P    MK+N DA    +  S+G+G +++D  G F+    +    A   E AEGLA
Sbjct: 26  MVWNTPSLGSMKVNMDATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLA 85

Query: 242 LPEAVLWFKSLPFSGSCPKVMFEGDCKNVIIAL---SSSKRPIELANQPLIGDCRSLLSS 72
           + EA+ W +          V+FE DC +++ AL    + +  + L    +I DC+ L SS
Sbjct: 86  IQEALSWARDRQLL----NVVFELDCLHIVEALLRKGTDRSSLGL----IIKDCKLLSSS 137

Query: 71  LTTFSCVFVHRECNNAALELAKL 3
           ++  S  FV R  N  A +LA++
Sbjct: 138 ISNCSFAFVKRSRNEVAHKLARV 160


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