BLASTX nr result

ID: Papaver22_contig00037307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037307
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   112   2e-23
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   112   2e-23
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   112   2e-23
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   111   5e-23
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   109   3e-22

>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/144 (38%), Positives = 87/144 (60%)
 Frame = -2

Query: 460  ESFSRLLVHAEYNGKIHGIRVTKNFPSISHLFFADDCLVFSRATVNGAKHLAEIIHMFSK 281
            E FS LL   E  G++HGIR+ +  PS+SHL FADD L+  RA    A+ L  I+ ++ +
Sbjct: 850  EGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEE 909

Query: 280  FSGQSINFDKSRLAFSPKTNPNVKNQIASILNIRRMALQDKYL*MPLLIQKNKVETFGHL 101
             SGQ IN DKS + FSP T+   K  + + LN++R    +KYL +P+ + +++ + F +L
Sbjct: 910  CSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYL 969

Query: 100  YEKFGNRLALWNGKHLNQTGRVVL 29
             E+   R+  W  K L++ G+ +L
Sbjct: 970  KERIWQRIQGWKEKLLSRAGKEIL 993


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/144 (38%), Positives = 87/144 (60%)
 Frame = -2

Query: 460  ESFSRLLVHAEYNGKIHGIRVTKNFPSISHLFFADDCLVFSRATVNGAKHLAEIIHMFSK 281
            E FS LL   E  G++HGIR+ +  PS+SHL FADD L+  RA    A+ L  I+ ++ +
Sbjct: 878  EGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEE 937

Query: 280  FSGQSINFDKSRLAFSPKTNPNVKNQIASILNIRRMALQDKYL*MPLLIQKNKVETFGHL 101
             SGQ IN DKS + FSP T+   K  + + LN++R    +KYL +P+ + +++ + F +L
Sbjct: 938  CSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYL 997

Query: 100  YEKFGNRLALWNGKHLNQTGRVVL 29
             E+   R+  W  K L++ G+ +L
Sbjct: 998  KERIWQRIQGWKEKLLSRAGKEIL 1021


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/144 (38%), Positives = 87/144 (60%)
 Frame = -2

Query: 460  ESFSRLLVHAEYNGKIHGIRVTKNFPSISHLFFADDCLVFSRATVNGAKHLAEIIHMFSK 281
            E FS LL   E  G++HGIR+ +  PS+SHL FADD L+  RA    A+ L  I+ ++ +
Sbjct: 846  EGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEE 905

Query: 280  FSGQSINFDKSRLAFSPKTNPNVKNQIASILNIRRMALQDKYL*MPLLIQKNKVETFGHL 101
             SGQ IN DKS + FSP T+   K  + + LN++R    +KYL +P+ + +++ + F +L
Sbjct: 906  CSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYL 965

Query: 100  YEKFGNRLALWNGKHLNQTGRVVL 29
             E+   R+  W  K L++ G+ +L
Sbjct: 966  KERIWQRIQGWKEKLLSRAGKEIL 989


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/144 (37%), Positives = 87/144 (60%)
 Frame = -2

Query: 460  ESFSRLLVHAEYNGKIHGIRVTKNFPSISHLFFADDCLVFSRATVNGAKHLAEIIHMFSK 281
            E FS LL   E  G++HGIR+ +  PS+SHL FADD L+  RA    A+ L  I+ ++ +
Sbjct: 905  EGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEE 964

Query: 280  FSGQSINFDKSRLAFSPKTNPNVKNQIASILNIRRMALQDKYL*MPLLIQKNKVETFGHL 101
             SGQ IN DKS + FSP T+   K  + + LN++R    ++YL +P+ + +++ + F +L
Sbjct: 965  CSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYL 1024

Query: 100  YEKFGNRLALWNGKHLNQTGRVVL 29
             E+   R+  W  K L++ G+ +L
Sbjct: 1025 KERIWQRIQGWKEKLLSRAGKEIL 1048


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/152 (36%), Positives = 90/152 (59%)
 Frame = -2

Query: 460  ESFSRLLVHAEYNGKIHGIRVTKNFPSISHLFFADDCLVFSRATVNGAKHLAEIIHMFSK 281
            E  S L+  AE +G I G ++ KN P ISHL FADDC +F +A    A+ +  I+ M+  
Sbjct: 1073 EGLSSLIRQAEGSGTISGAKICKNAPIISHLLFADDCFLFFKAKSGQAQGMKNILEMYES 1132

Query: 280  FSGQSINFDKSRLAFSPKTNPNVKNQIASILNIRRMALQDKYL*MPLLIQKNKVETFGHL 101
             SGQSINF KS + +S   +  VK  I+ IL ++++    KYL +P ++ ++++ TF  +
Sbjct: 1133 SSGQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMGTGKYLGVPSMVGRSRISTFKFV 1192

Query: 100  YEKFGNRLALWNGKHLNQTGRVVLDQMILGSL 5
             E+   ++  W+ K L+Q GR  L + +L S+
Sbjct: 1193 KERVWKKINSWSSKCLSQAGRETLIKSVLQSI 1224


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