BLASTX nr result
ID: Papaver22_contig00037297
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00037297
(551 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 67 1e-19
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 58 7e-17
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 61 7e-17
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 55 4e-14
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 52 5e-14
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 67.4 bits (163), Expect(2) = 1e-19
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Frame = -2
Query: 547 RKKRTQIESFQSDIGVWLTYKDSIAYARRNHFSKMNRSSNPP-----NADDFLKDPTPCI 383
RK R QI+ F D +T D I F K SNP N D L +P +
Sbjct: 376 RKYRNQIKEFIPDNAQPITQPDLIEKEITLAFKK-RFISNPACKFNQNVDFNLL--SPIV 432
Query: 382 SSSENDVLIRMHVAEEIRNILFQMQLWTXXXXXXXXXXXYQKIWEIVGEVMIKMVQAFFH 203
S ++N L EEI+N +F + +QK W ++G+ + + VQAFFH
Sbjct: 433 SEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFH 492
Query: 202 SKHLLKQLNHSFISLIPKTVAP 137
S ++LK++NH+F++LIPK P
Sbjct: 493 SGYMLKEVNHTFLALIPKVDKP 514
Score = 54.3 bits (129), Expect(2) = 1e-19
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = -1
Query: 140 P*NASDFRPISLSNVAYKVISKLLTSRLKVVMDKFISPYQDAFL 9
P NA+ FRPISL + YKVISK++T+RLK+ + K I P Q AF+
Sbjct: 514 PVNANHFRPISLCSTIYKVISKIITNRLKITLGKIIHPLQGAFI 557
>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1365
Score = 58.2 bits (139), Expect(2) = 7e-17
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Frame = -2
Query: 547 RKKRTQIESFQSDIGVWLTYKDSIAYARRNHFSKMNRSSNPPNAD----DFLKDPTPCIS 380
RK++ +I ++ G W++ K I +F+ + + S D ++ P I
Sbjct: 371 RKQKNEILVIKNSAGKWVSSKQDIQGEFLGYFADIFQGSQHSQEYWEELDGIRHLIPQID 430
Query: 379 SSENDVLIRMHVAEEIRNILFQMQLWTXXXXXXXXXXXYQKIWEIVGEVMIKMVQAFFHS 200
+ + LI+ EE+RN++FQM YQK W IVGE + + V FF +
Sbjct: 431 LMQREDLIKPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTT 490
Query: 199 KHLLKQLNHSFISLIPKTVAP 137
++L++ N + I LIPK P
Sbjct: 491 GYILQEWNQTNICLIPKVERP 511
Score = 53.9 bits (128), Expect(2) = 7e-17
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = -1
Query: 140 P*NASDFRPISLSNVAYKVISKLLTSRLKVVMDKFISPYQDAFL 9
P A FRPISL NV YK+ISK++ +RLK ++ ++PYQ+AF+
Sbjct: 511 PEQACQFRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFV 554
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 60.8 bits (146), Expect(2) = 7e-17
Identities = 36/141 (25%), Positives = 67/141 (47%)
Frame = -2
Query: 547 RKKRTQIESFQSDIGVWLTYKDSIAYARRNHFSKMNRSSNPPNADDFLKDPTPCISSSEN 368
RK+R I + GVW ++ I +++F + + +P N + L+ + C+S+ N
Sbjct: 365 RKRRNTINELLDENGVWKKGREEICGVVQHYFEGLFATDSPVNMELALEGLSHCVSTDMN 424
Query: 367 DVLIRMHVAEEIRNILFQMQLWTXXXXXXXXXXXYQKIWEIVGEVMIKMVQAFFHSKHLL 188
L+ + +E++ LF M +QK W I+G +I VQ+++ L
Sbjct: 425 TALLMLPSGDEVKEALFAMHPNKAPGIDGLHALFFQKFWHILGSDVISFVQSWWRGMGDL 484
Query: 187 KQLNHSFISLIPKTVAPRMLQ 125
+N + I LIPK P+ ++
Sbjct: 485 GVVNKTCIVLIPKCDHPQSMK 505
Score = 51.2 bits (121), Expect(2) = 7e-17
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = -1
Query: 140 P*NASDFRPISLSNVAYKVISKLLTSRLKVVMDKFISPYQDAFL 9
P + DFRPISL V YK++SK L +RLKV++ ISP Q AF+
Sbjct: 501 PQSMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFV 544
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 55.1 bits (131), Expect(2) = 4e-14
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Frame = -2
Query: 547 RKKRTQIESFQSDIGVWLTYKDSIAYARRNHFSKMNRSSNPPNADDFLKDPTPCISSSEN 368
R+ R +I + G+W D I ++F + ++NP D+ L + I+ N
Sbjct: 146 RRARNRITGLHDENGIWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRIN 205
Query: 367 DVLIRMHVAEEIRNILFQMQLWTXXXXXXXXXXXYQKIWEIVGEVMIKMVQAFFHSKHLL 188
D+L E+R LF + +QK W I+ ++ +V +F
Sbjct: 206 DLLTADATECEVRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFD 265
Query: 187 KQLNHSFISLIPKTVAP-RMLQI 122
K+LN + I LIPKT P RM ++
Sbjct: 266 KRLNTTNICLIPKTERPTRMTEL 288
Score = 47.8 bits (112), Expect(2) = 4e-14
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -1
Query: 140 P*NASDFRPISLSNVAYKVISKLLTSRLKVVMDKFISPYQDAFL 9
P ++ RPISL NV YKVISK+L RLK V+ IS Q AF+
Sbjct: 282 PTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFV 325
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 52.0 bits (123), Expect(2) = 5e-14
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -1
Query: 140 P*NASDFRPISLSNVAYKVISKLLTSRLKVVMDKFISPYQDAFLA 6
P ++FRPISL NV+YKVISK+L+SRLK ++ + IS Q AF+A
Sbjct: 445 PRKMAEFRPISLCNVSYKVISKVLSSRLKRLLPELISETQSAFVA 489
Score = 50.4 bits (119), Expect(2) = 5e-14
Identities = 38/133 (28%), Positives = 61/133 (45%)
Frame = -2
Query: 526 ESFQSDIGVWLTYKDSIAYARRNHFSKMNRSSNPPNADDFLKDPTPCISSSENDVLIRMH 347
E+F ++ + L +K AY F K+ NP D L++ I+ N L ++
Sbjct: 319 ENFSTEDLLALKWKLCQAYRDEEIFWKLK---NPQVFDSALQEVPVLITEEMNKSLTKVI 375
Query: 346 VAEEIRNILFQMQLWTXXXXXXXXXXXYQKIWEIVGEVMIKMVQAFFHSKHLLKQLNHSF 167
EE++ LF + YQ W++ G +IK+VQ F + ++LN +
Sbjct: 376 SPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETN 435
Query: 166 ISLIPKTVAPRML 128
I LIPKT PR +
Sbjct: 436 ICLIPKTERPRKM 448