BLASTX nr result

ID: Papaver22_contig00037254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037254
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB72467.1| putative protein [Arabidopsis thaliana]                79   4e-13
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    74   1e-11
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                72   5e-11
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    72   5e-11

>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = -1

Query: 448 LNNIFRNFLWAGVDLVYK*PAVKWIIIFHPYREGGLGISCIETTNTDANLRYI*DNVSNK 269
           +  +  +FLW+G +L  K   + W  +  P  EGGLG+  ++  N    L+ +   +S+ 
Sbjct: 392 IEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHG 451

Query: 268 DTIWVKLVCSNLIKMKDFWFLKVPSDY-SWC*KIILDHGGIASQFILRLIGNRESARLWK 92
           D++WVK V  NL+K + FW +K  ++  SW  K IL + G+A +F    +GN ES   W 
Sbjct: 452 DSLWVKWVEHNLLKREIFWIVKENANLGSWIWKKILKYRGVAKRFCKAEVGNGESTSFWF 511

Query: 91  DK*LPQGNLLNI 56
           D     G L+++
Sbjct: 512 DDWSLLGRLIDV 523


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
 Frame = -1

Query: 448 LNNIFRNFLWAGVDLVYK*PAVKWIIIFHPYREGGLGISCIETTNTDANLRYI*DNVSNK 269
           +  I ++FLW+G D+      V W  +  P +EGGLGI  I+  N  A L++I +  ++ 
Sbjct: 126 VEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDS 185

Query: 268 D-TIWVKLVCSNLIKMKDFWFLKVPSDYSWC*KIILDHGGIASQFILRLIGNRESARLWK 92
           D +IW   + SNL++ ++FW +K P + SW    IL    +A   +  +IG+  +  LW 
Sbjct: 186 DGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWF 245

Query: 91  DK*LPQGNLLNIFPPHMMYD 32
           D   P   L + +    +YD
Sbjct: 246 DNWHPHSPLADSYGERFIYD 265


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/132 (31%), Positives = 64/132 (48%)
 Frame = -1

Query: 427 FLWAGVDLVYK*PAVKWIIIFHPYREGGLGISCIETTNTDANLRYI*DNVSNKDTIWVKL 248
           FLW+G +L      + W  +  P REGGLG+  I+  N    L+ I   VS  D++WV+ 
Sbjct: 364 FLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQW 423

Query: 247 VCSNLIKMKDFWFLKVPSDYSWC*KIILDHGGIASQFILRLIGNRESARLWKDK*LPQGN 68
           + + L+K   FW  +  S  SW  K +L +   A  F    I N E+A  W D    +G 
Sbjct: 424 IRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRNGETASFWYDDWSSKGR 483

Query: 67  LLNIFPPHMMYD 32
           L+++      +D
Sbjct: 484 LIDVLGERGQFD 495


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
 Frame = -1

Query: 448 LNNIFRNFLWAGVDLVYK*PAVKWIIIFHPYREGGLGISCIETTNTDANLRYI*DNVSNK 269
           ++ +  +FLW+G ++      + W I+  P  EGGLG+  ++  N  + L+ +   +SN 
Sbjct: 486 IDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNS 545

Query: 268 DTIWVKLVCSNLIKMKDFWFLKVPSDY-SWC*KIILDHGGIASQFILRLIGNRESARLWK 92
           +++W K V   LI+ K  W LK  +   SW  + IL    +A  F    +GN ESA  W 
Sbjct: 546 NSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWY 605

Query: 91  DK*LPQGNLLN 59
           D     G L++
Sbjct: 606 DHWSAHGRLID 616


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
 Frame = -1

Query: 448 LNNIFRNFLWAGVDLVYK*PAVKWIIIFHPYREGGLGISCIETTNTDANLRYI*DNVSNK 269
           +N I    LW+G +L  K   V W  I  P +EGGLG+  +   N  ++L+ I   +S +
Sbjct: 560 INRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQ 619

Query: 268 DTIWVKLVCSNLIKMKDFWFLKVPSDY-SWC*KIILDHGGIASQFILRLIGNRESARLWK 92
           D++WVK    NL+K + FW +   S   SW  + +L H  +A  F    + N  +   W 
Sbjct: 620 DSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFWF 679

Query: 91  DK*LPQGNLLNI 56
           D    +G L+N+
Sbjct: 680 DNWSEKGPLINL 691


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