BLASTX nr result

ID: Papaver22_contig00037253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037253
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat...   166   2e-39
ref|XP_002329202.1| chromatin remodeling complex subunit [Populu...   162   3e-38
ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago t...   161   7e-38
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH...   156   2e-36
emb|CBI25341.3| unnamed protein product [Vitis vinifera]              156   2e-36

>ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis]
           gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring
           helicase, putative [Ricinus communis]
          Length = 1588

 Score =  166 bits (421), Expect = 2e-39
 Identities = 95/180 (52%), Positives = 120/180 (66%), Gaps = 2/180 (1%)
 Frame = -3

Query: 535 SLVQLISQKMLAVRPVKEVRVSEGEEFVSITLRVEILKSAFDLCGSLLETSRKPWKKSMM 356
           SLV LIS + L +RPV     SE  E +S+ +RVEILK AFD C SLLE +R+ WKKSMM
Sbjct: 156 SLVHLISMEFLTLRPVLGFNYSE--EMMSLRVRVEILKKAFDSCKSLLENTRQLWKKSMM 213

Query: 355 SVMSWLRPEVTACGAIYAGIEETESMEIDACMDETVEGSSGCDPRDSTNG--FDVAEFYD 182
           +VM+WLRPEV    A Y     T+S E+D      + G  G D   S     FDVA FY+
Sbjct: 214 NVMAWLRPEVVTSEARYG---VTKSTEVD------LVGEMGNDISYSRKRPRFDVAGFYE 264

Query: 181 SIKPSKGEPMLDDELPDLRPTLRPYQRRAANWMVQREKGASENLNSEDQNQFFRPLCLTV 2
           +IKPSK  P+L+D+LPDL P LRPYQRRAA WM+Q+EKG S +   ++++QFF PLC+ V
Sbjct: 265 AIKPSKSSPILNDDLPDLLPVLRPYQRRAAYWMLQQEKGHSRDSIEKERSQFFSPLCMPV 324


>ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222870983|gb|EEF08114.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1320

 Score =  162 bits (410), Expect = 3e-38
 Identities = 91/177 (51%), Positives = 122/177 (68%)
 Frame = -3

Query: 532 LVQLISQKMLAVRPVKEVRVSEGEEFVSITLRVEILKSAFDLCGSLLETSRKPWKKSMMS 353
           LV L + + L +RPV  V  SE  +   + +RVEIL+ AFD C SLLE++R+ WKKSMM+
Sbjct: 164 LVHLTNMEFLTLRPVLGVDFSE--KMTPLRMRVEILEKAFDACESLLESTRQIWKKSMMN 221

Query: 352 VMSWLRPEVTACGAIYAGIEETESMEIDACMDETVEGSSGCDPRDSTNGFDVAEFYDSIK 173
           VM+WLRPEV    A Y   + TE ME++    E  + +S    R     FDVA  Y++IK
Sbjct: 222 VMAWLRPEVMTSEARYRHAKSTE-MEVNMAA-EIGDDTSNSGKRAQ---FDVAGLYEAIK 276

Query: 172 PSKGEPMLDDELPDLRPTLRPYQRRAANWMVQREKGASENLNSEDQNQFFRPLCLTV 2
           PSK +PML+D+LPDL PTLRPYQRRAA+WMVQ+EKG S ++  ++++QFF PLC+ V
Sbjct: 277 PSKSDPMLEDDLPDLLPTLRPYQRRAAHWMVQQEKGESSSV--KERSQFFSPLCMPV 331


>ref|XP_003615435.1| ATP-dependent helicase, putative [Medicago truncatula]
           gi|355516770|gb|AES98393.1| ATP-dependent helicase,
           putative [Medicago truncatula]
          Length = 1764

 Score =  161 bits (407), Expect = 7e-38
 Identities = 89/177 (50%), Positives = 116/177 (65%)
 Frame = -3

Query: 532 LVQLISQKMLAVRPVKEVRVSEGEEFVSITLRVEILKSAFDLCGSLLETSRKPWKKSMMS 353
           LV L S K + +R V  +++S+  +  S+ +RVE+LKSAFD C SL+E SRKPWKKSMM+
Sbjct: 152 LVHLASMKFVTLRAVLGIKLSD--DIPSLRMRVEVLKSAFDACESLIEGSRKPWKKSMMN 209

Query: 352 VMSWLRPEVTACGAIYAGIEETESMEIDACMDETVEGSSGCDPRDSTNGFDVAEFYDSIK 173
           VMSWLRPE+      Y G      ME+D   D   +G          + FD A FY++IK
Sbjct: 210 VMSWLRPEIMTSEVKY-GFSSYMEMEVDLQTDMADDGGYA----GKCSRFDPAGFYEAIK 264

Query: 172 PSKGEPMLDDELPDLRPTLRPYQRRAANWMVQREKGASENLNSEDQNQFFRPLCLTV 2
           PSK EPML+D++P+L P LRPYQRRAA WMV+REK A E+    ++NQF  PLC+ V
Sbjct: 265 PSKTEPMLEDDIPELLPELRPYQRRAALWMVKREK-AMEDQAEIERNQFHSPLCVPV 320


>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
          Length = 1704

 Score =  156 bits (395), Expect = 2e-36
 Identities = 95/178 (53%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
 Frame = -3

Query: 532 LVQLISQKMLAVRPVKEVRVSEGEEFVSITLRVEILKSAFDLCGSLLETSRKPWKKSMMS 353
           LV L   K+L +RPV  V  SEG  FV   LRVEIL++AFD C SLL+ SR  WKKSMMS
Sbjct: 158 LVHLSRLKLLTLRPVLGVTFSEGVSFVR--LRVEILRTAFDACESLLDNSRPLWKKSMMS 215

Query: 352 VMSWLRPEVTACGAIYAGIEETESMEIDACMDETVEGSSGCDPRDSTNGFDVAEFYDSIK 173
           VM+WLRPEVT   A Y G+ +++ M+ID+ M   V      D +   N FD A FY++IK
Sbjct: 216 VMAWLRPEVTTSEARY-GVAKSKEMDIDSNMGMDV---GDLDSKKHQN-FDAAGFYEAIK 270

Query: 172 PSKGEPMLDDELPDLRPTLRPYQRRAANWMVQRE-KGASENLNSEDQNQFFRPLCLTV 2
           PSK +P+LD ++PDL P LRPYQRRAA WMVQRE KG   +L        F PLC+ V
Sbjct: 271 PSKEDPLLDYDMPDLLPELRPYQRRAAYWMVQREIKGEGGSL--------FSPLCMPV 320


>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
          Length = 1717

 Score =  156 bits (395), Expect = 2e-36
 Identities = 95/178 (53%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
 Frame = -3

Query: 532 LVQLISQKMLAVRPVKEVRVSEGEEFVSITLRVEILKSAFDLCGSLLETSRKPWKKSMMS 353
           LV L   K+L +RPV  V  SEG  FV   LRVEIL++AFD C SLL+ SR  WKKSMMS
Sbjct: 158 LVHLSRLKLLTLRPVLGVTFSEGVSFVR--LRVEILRTAFDACESLLDNSRPLWKKSMMS 215

Query: 352 VMSWLRPEVTACGAIYAGIEETESMEIDACMDETVEGSSGCDPRDSTNGFDVAEFYDSIK 173
           VM+WLRPEVT   A Y G+ +++ M+ID+ M   V      D +   N FD A FY++IK
Sbjct: 216 VMAWLRPEVTTSEARY-GVAKSKEMDIDSNMGMDV---GDLDSKKHQN-FDAAGFYEAIK 270

Query: 172 PSKGEPMLDDELPDLRPTLRPYQRRAANWMVQRE-KGASENLNSEDQNQFFRPLCLTV 2
           PSK +P+LD ++PDL P LRPYQRRAA WMVQRE KG   +L        F PLC+ V
Sbjct: 271 PSKEDPLLDYDMPDLLPELRPYQRRAAYWMVQREIKGEGGSL--------FSPLCMPV 320


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