BLASTX nr result

ID: Papaver22_contig00037110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037110
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1...    67   2e-09
ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus ...    61   6e-09
ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002874499.1| F-box family protein [Arabidopsis lyrata sub...    62   4e-08
ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [S...    62   4e-08

>ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1 [Glycine max]
           gi|356508075|ref|XP_003522786.1| PREDICTED: F-box
           protein FBW2-like isoform 2 [Glycine max]
          Length = 321

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = +3

Query: 18  VLEIISNCKDLEYIDLKSFWKSWDVKLDEKYLKEKLPRLEVAGP-IVDKRSCWDMDYCFY 194
           VL+I++NC  LE++D +     W V LD  +LK+K P+L+V GP ++D       D    
Sbjct: 205 VLQILANCPKLEFLDQRG---CWGVTLDHMFLKQKFPKLKVLGPFVLDTYESDGWDDFSD 261

Query: 195 YSDSSAHLSWDFVAGGIE 248
            SDSS +L+WDFVAGG+E
Sbjct: 262 VSDSSEYLAWDFVAGGME 279


>ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547036|gb|EEF48533.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 329

 Score = 61.2 bits (147), Expect(2) = 6e-09
 Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
 Frame = +3

Query: 15  AVLEIISNCKDLEYIDLKSFWKSWDVKLDEKYLKEKLPRLEVAGP-IVDKRSCWDM-DYC 188
           +VL+I+S+C +LE+++L      WDVK D  +L+EK P+L+V GP ++D     D  DYC
Sbjct: 205 SVLKILSSCPELEFLNLTG---CWDVKFDRNFLQEKFPKLKVVGPHLLDYYDMNDWGDYC 261

Query: 189 F----YYSDSSAHLSWDFVAGGIE 248
                 YSD+S + +W+  +G +E
Sbjct: 262 SEYSDAYSDASEYFAWEIFSGDME 285



 Score = 23.9 bits (50), Expect(2) = 6e-09
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 293 IEELEMRFYGVNQD 334
           +EELE+RFY  N+D
Sbjct: 306 LEELELRFYEGNED 319


>ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|222842792|gb|EEE80339.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 64.7 bits (156), Expect(2) = 6e-09
 Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
 Frame = +3

Query: 15  AVLEIISNCKDLEYIDLKSFWKSWDVKLDEKYLKEKLPRLEVAGPIV----DKRSCWDMD 182
           ++L+I+S+C +LE++DL+     W+V LD K+ KEK  +L V GP+V     + + W+ D
Sbjct: 204 SLLQILSSCTNLEFMDLRG---CWNVNLDNKFFKEKFQKLTVLGPLVMEDYYEANDWEED 260

Query: 183 YCFYYSDSSAHLSWDFVAG 239
            C  YSD S +L+W F+AG
Sbjct: 261 -CSEYSDDSDYLAWGFLAG 278



 Score = 20.4 bits (41), Expect(2) = 6e-09
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +2

Query: 293 IEELEMRFY 319
           +EELE+RFY
Sbjct: 299 LEELELRFY 307


>ref|XP_002874499.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320336|gb|EFH50758.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
 Frame = +3

Query: 18  VLEIISNCKDLEYIDLKSFWKSWDVKLDEKYLKEKLPRLEVAGPIV----DKRSCWDMDY 185
           VL+I+S+C  LE+++L+     WDV+LD K+ KEK P ++V GP V    D  + W+   
Sbjct: 206 VLKILSSCIFLEFLELRG---CWDVQLDNKFFKEKFPDMKVLGPRVIGFYDMINDWEDCC 262

Query: 186 CFYYSDSSAHLSWDFVAGGI 245
             Y+SD S +L+W+F   G+
Sbjct: 263 SDYFSDGSDYLAWEFFEDGV 282


>ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [Sorghum bicolor]
           gi|241934071|gb|EES07216.1| hypothetical protein
           SORBIDRAFT_04g027350 [Sorghum bicolor]
          Length = 365

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
 Frame = +3

Query: 15  AVLEIISNCKDLEYIDLKSFWKSWDVKLDEKYLKEKLPRLEVAGPIVDKRSCWDMDY--- 185
           AVLEI+  C+DL+++DL+  W      +D+K+L+E+ P L V GP VD   C++  Y   
Sbjct: 251 AVLEILGQCRDLKFLDLRGCW-----TVDDKFLRERHPGLRVLGPRVD--DCYENSYWEE 303

Query: 186 CFYYSDSSAHLSWDFV 233
           C  YSD S+  SW+F+
Sbjct: 304 CSDYSDDSSIYSWEFM 319


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