BLASTX nr result

ID: Papaver22_contig00037000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037000
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...   115   8e-24
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...   115   8e-24
gb|ABN07997.1| contains similarity to reverse trancriptase , rel...   110   3e-22
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   109   4e-22
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   108   1e-21

>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score =  115 bits (288), Expect = 8e-24
 Identities = 80/230 (34%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
 Frame = +3

Query: 6   KEAGGLGIRRLQELNKAMIAKLVWKFLTDDECLWVQLMTAKYLKTDHFWEVKKRAKCSST 185
           K AGGLG R +   N AM+AK  W+ + + E L  Q++ AKY  + + +  KK A  S T
Sbjct: 86  KWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYT 145

Query: 186 WSAMLNCRKEMRNSCCWSVGDGTQIKIRHDPWVPNLPNMRPELRSETHPEIIWVKDLFIE 365
           W ++      +R+   W VG+G  I I  DPW+P+    RP +       +  V++L   
Sbjct: 146 WRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPSDHTRRP-ITPRGRNLVTRVEELIDP 204

Query: 366 NTNTWDEEKLQQLFCSDAVNKIKEIYVPNIENNAKDTLMWIDHPKGTFSSKSFLK----- 530
           +T +WD E L Q F  + VN I+ I V +IE +  D L W    KG FS KS  K     
Sbjct: 205 STGSWDVELLTQTFWPEDVNMIRTIPV-HIEMD--DMLAWHYDEKGLFSVKSAYKVQRDG 261

Query: 531 SLQVR----APSTSSGVGAEFPWCKFWKIKNIPPRVLMFMWRVIKDGLAV 668
            LQ R    A  ++     E  W K WK++ +P +V  F+WR   + LA+
Sbjct: 262 ELQRRKRGSAGLSNGSTEREMYWKKVWKMQ-LPGKVKHFIWRFSHNILAL 310


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score =  115 bits (288), Expect = 8e-24
 Identities = 80/230 (34%), Positives = 116/230 (50%), Gaps = 9/230 (3%)
 Frame = +3

Query: 6    KEAGGLGIRRLQELNKAMIAKLVWKFLTDDECLWVQLMTAKYLKTDHFWEVKKRAKCSST 185
            K AGGLG R +   N AM+AK  W+ + + E L  Q++ AKY  + + +  KK A  S T
Sbjct: 979  KWAGGLGFRDIHAFNLAMLAKQGWRLIQNPESLCAQVLKAKYYPSGNIFSAKKCANMSYT 1038

Query: 186  WSAMLNCRKEMRNSCCWSVGDGTQIKIRHDPWVPNLPNMRPELRSETHPEIIWVKDLFIE 365
            W ++      +R+   W VG+G  I I  DPW+P+    RP +       +  V++L   
Sbjct: 1039 WRSICRGLLTLRDGMIWRVGNGAAINIWSDPWIPSDHTRRP-ITPRGRNLVTRVEELIDP 1097

Query: 366  NTNTWDEEKLQQLFCSDAVNKIKEIYVPNIENNAKDTLMWIDHPKGTFSSKSFLK----- 530
            +T +WD E L Q F  + VN I+ I V +IE +  D L W    KG FS KS  K     
Sbjct: 1098 STGSWDVELLTQTFWPEDVNMIRTIPV-HIEMD--DMLAWHYDEKGLFSVKSAYKVQRDG 1154

Query: 531  SLQVR----APSTSSGVGAEFPWCKFWKIKNIPPRVLMFMWRVIKDGLAV 668
             LQ R    A  ++     E  W K WK++ +P +V  F+WR   + LA+
Sbjct: 1155 ELQRRKRGSAGLSNGSTEREMYWKKVWKMQ-LPGKVKHFIWRFSHNILAL 1203


>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
           truncatula]
          Length = 407

 Score =  110 bits (275), Expect = 3e-22
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 4/227 (1%)
 Frame = +3

Query: 6   KEAGGLGIRRLQELNKAMIAKLVWKFLTDDECLWVQLMTAKYLKTDHFWEVKKRAKCSST 185
           K +GGLG + L++ N AM+AK V +F T+   L  +   A Y       + K     S  
Sbjct: 128 KHSGGLGFKTLRDFNLAMLAKKVRRFYTNPNSLIAKCFKANYYPHTDILQAKVGNYPSYA 187

Query: 186 WSAMLNCRKEMRNSCCWSVGDGTQIKIRHDPWVPNLPNMRPELRSETHPEIIWVKDLFIE 365
           W ++ N    +    CW +GDG  I I  D WVP    ++       +  +  VKDL   
Sbjct: 188 WKSIQNAIWVISKGSCWRIGDGGSINIWEDNWVPTYKGLKVMTTKGPNHFVNRVKDLINN 247

Query: 366 NTNTWDEEKLQQLFCSDAVNKIKEIYVPNIENNAKDTLMWIDHPKGTFSSKSFLKSLQV- 542
             + W++  L+  F S  +++I   ++P +     D+LMW+ +P G +S KS   +L+  
Sbjct: 248 QESLWNKVILEDQFISINIDQIS--HIPLVNTTNPDSLMWMHNPTGIYSVKSGYNTLRTW 305

Query: 543 ---RAPSTSSGVGAEFPWCKFWKIKNIPPRVLMFMWRVIKDGLAVSS 674
              +  +TS+       W K W +  I PR  + +WR++ D L V S
Sbjct: 306 QTQQINNTSTSSDETLIWKKIWSLHTI-PRHKVLLWRILNDSLPVRS 351


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  109 bits (273), Expect = 4e-22
 Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
 Frame = +3

Query: 6    KEAGGLGIRRLQELNKAMIAKLVWKFLTDDECLWVQLMTAKYLKTDHFWEVKKRAKCSST 185
            K+ GGLG R L   N+A++ K  W+ +   + L  +++ AKY   D F E +  +  S  
Sbjct: 1135 KKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYL 1194

Query: 186  WSAMLNCRKEMRNSCCWSVGDGTQIKIRHDPWVPNLPNMRPELRSETHPEIIWVKDLFIE 365
            W + L  R+ +R    W +GDG ++++  DPWVP LP+ RP LR +  P  + V DL + 
Sbjct: 1195 WRSFLWGRELLRKGVRWRIGDGKEVRVFIDPWVPGLPSFRPILR-QGAPLFLRVSDL-LH 1252

Query: 366  NTNTWDEEKLQQLFCSDAVNKIKEIYVPNIENNAKDTLMWIDHPKGTFSSKS--FLKSLQ 539
            N   W+ E L   F  D    I  I V        D  MW     G ++ KS  +L   +
Sbjct: 1253 NNGGWNMEALNYWFTDDECEAISSITVG--ATRRPDVYMWNYCKNGRYTVKSGYWLACEE 1310

Query: 540  VRAPSTSSGVGAEFPWCKFWKIKNIPPRVLMFMWR 644
             R  + +  +     W   WK+K +PP++  F+WR
Sbjct: 1311 NREEAINIVLAPRNFWKHLWKLK-LPPKINHFLWR 1344


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  108 bits (269), Expect = 1e-21
 Identities = 73/230 (31%), Positives = 117/230 (50%), Gaps = 9/230 (3%)
 Frame = +3

Query: 6    KEAGGLGIRRLQELNKAMIAKLVWKFLTDDECLWVQLMTAKYLKTDHFWEVKKRAKCSST 185
            K  GGLG R +   N AM+AK  W+ + D + L  +++ AKY      +  K+ +  S T
Sbjct: 1104 KNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYT 1163

Query: 186  WSAMLNCRKEMRNSCCWSVGDGTQIKIRHDPWVPNLPNMRPELRSETHPEIIWVKDLFIE 365
            W ++    + ++N   W VGDG++I I  DPW+P   + +P +       +  V++L   
Sbjct: 1164 WRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP-MTPRGANLVTKVEELIDP 1222

Query: 366  NTNTWDEEKLQQLFCSDAVNKIKEIYVPNIENNAKDTLMWIDHPKGTFSSKSFLK---SL 536
             T TWDE+ L Q F  + V  IK I V ++E   +D L W    +G F+ KS  K    +
Sbjct: 1223 YTGTWDEDLLSQTFWEEDVAAIKSIPV-HVE--MEDVLAWHFDARGCFTVKSAYKVQREM 1279

Query: 537  QVRA-----PSTSS-GVGAEFPWCKFWKIKNIPPRVLMFMWRVIKDGLAV 668
            + RA     P  S+   G +  W K WK+  +P ++  F+WR+  + LA+
Sbjct: 1280 ERRASRNGCPGVSNWESGDDDFWKKLWKL-GVPGKIKHFLWRMCHNTLAL 1328


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