BLASTX nr result
ID: Papaver22_contig00036801
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver22_contig00036801 (464 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers... 75 4e-12 ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia... 69 3e-10 ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein A... 69 4e-10 emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 66 3e-09 gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 66 3e-09 >gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis thaliana] Length = 1231 Score = 75.5 bits (184), Expect = 4e-12 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Frame = -3 Query: 459 QIRCVRPRLSGKGIYRWSLTKSGKCTTKTAYDLLDNRNAGQLTTNPM---------SKIW 307 +IR RP +S + W KSG + K Y L N+N GQ+ M +++W Sbjct: 836 KIRENRPVVSLDDFWIWKHNKSGDYSVKLGYWLASNQNLGQVAIEAMMQPSLNDLKTQVW 895 Query: 306 GIQTTPKIKIFLWRCTTNCLPVRDILETRIDLETVNCPMCDCARETAEHLLMDFSYAIAI 127 +QT PKIK+FLW+ + +PV D+L R C C C E+ +H+L S+ + Sbjct: 896 KLQTEPKIKVFLWKVLSGAIPVVDLLSYRGMKLDSRCQTCGCEGESIQHVLFSCSFPRQV 955 Query: 126 W 124 W Sbjct: 956 W 956 >ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana] gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis thaliana] gi|7269807|emb|CAB79667.1| putative protein [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1| putative reverse transcriptase/RNA-dependent DNA polymerase [Arabidopsis thaliana] gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein [Arabidopsis thaliana] Length = 575 Score = 69.3 bits (168), Expect = 3e-10 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 9/107 (8%) Frame = -3 Query: 417 YRWSLTKSGKCTTKTAY----DLLDNRNAGQLTTNPM-----SKIWGIQTTPKIKIFLWR 265 Y W T SG T K+ Y +++ R++ Q + P KIW QT+PKI+ FLW+ Sbjct: 213 YTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWK 272 Query: 264 CTTNCLPVRDILETRIDLETVNCPMCDCARETAEHLLMDFSYAIAIW 124 C +N LPV L R + C C +ET HLL ++A W Sbjct: 273 CLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTW 319 >ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine max] Length = 549 Score = 68.9 bits (167), Expect = 4e-10 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%) Frame = -3 Query: 447 VRPRLSGKGIYRWSLTKSGKCTTKTAYDLLDNRNAGQLTTNPMSKIWGIQTTPKIKIFLW 268 +RP LS + ++W+ SG +TK+AY L + AG+ ++W ++ K+ IF W Sbjct: 417 IRPELSDQ--WKWAAEPSGWYSTKSAYKALHHVTAGEEQDGKFKELWKLRVPLKVAIFAW 474 Query: 267 RCTTNCLPVR-DILETRIDLETVNCPMCDCARETAEHLLMDFSYAIAIWF 121 R + LP + ++ + R++L+ CP+C ETA HL S +W+ Sbjct: 475 RLIQDKLPTKANLRKKRVELQEYLCPLCRSVEETASHLFFHCSKVSPLWW 524 >emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana] gi|7267666|emb|CAB78094.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana] Length = 1274 Score = 66.2 bits (160), Expect = 3e-09 Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Frame = -3 Query: 411 WSLTKSGKCTTKTAYDL--LDNRNAGQLTTNPMSKIWGIQTTPKIKIFLWRCTTNCLPVR 238 W KSG+ TTKT Y L L++ A QL N IW I T+PK+K FLW+ LPV Sbjct: 939 WLPVKSGEYTTKTGYALAKLNSFPASQLDFNWQKNIWKIHTSPKVKHFLWKAMKGALPVG 998 Query: 237 DILETRIDLETVNCPMCDCARETAEHLLMDFSYAIAIW 124 + L R V C C E++ HL++ YA +W Sbjct: 999 EALSRRNIEAEVTCKRCG-QTESSLHLMLLCPYAKKVW 1035 >gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1094 Score = 66.2 bits (160), Expect = 3e-09 Identities = 42/122 (34%), Positives = 56/122 (45%), Gaps = 10/122 (8%) Frame = -3 Query: 459 QIRCV-RPRLSGKGIYRWSLTKSGKCTTKTAYDLLDNRNAGQL--------TTNPM-SKI 310 QI C RP S + + W T G T K+ YDL + Q+ + NP+ KI Sbjct: 716 QIICQQRPMASRQDSFCWFGTNHGLYTVKSEYDLCSRQVHKQMFKEAEEQPSLNPLFGKI 775 Query: 309 WGIQTTPKIKIFLWRCTTNCLPVRDILETRIDLETVNCPMCDCARETAEHLLMDFSYAIA 130 W + + PKIK+FLW+ + V D L TR L C MC ET H+L A Sbjct: 776 WNLNSAPKIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQ 835 Query: 129 IW 124 +W Sbjct: 836 VW 837