BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00036801
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF18538.1|AC006551_24 Very similar to retrotransposon revers...    75   4e-12
ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia...    69   3e-10
ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein A...    69   4e-10
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    66   3e-09
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    66   3e-09

>gb|AAF18538.1|AC006551_24 Very similar to retrotransposon reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
 Frame = -3

Query: 459  QIRCVRPRLSGKGIYRWSLTKSGKCTTKTAYDLLDNRNAGQLTTNPM---------SKIW 307
            +IR  RP +S    + W   KSG  + K  Y L  N+N GQ+    M         +++W
Sbjct: 836  KIRENRPVVSLDDFWIWKHNKSGDYSVKLGYWLASNQNLGQVAIEAMMQPSLNDLKTQVW 895

Query: 306  GIQTTPKIKIFLWRCTTNCLPVRDILETRIDLETVNCPMCDCARETAEHLLMDFSYAIAI 127
             +QT PKIK+FLW+  +  +PV D+L  R       C  C C  E+ +H+L   S+   +
Sbjct: 896  KLQTEPKIKVFLWKVLSGAIPVVDLLSYRGMKLDSRCQTCGCEGESIQHVLFSCSFPRQV 955

Query: 126  W 124
            W
Sbjct: 956  W 956


>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
 Frame = -3

Query: 417 YRWSLTKSGKCTTKTAY----DLLDNRNAGQLTTNPM-----SKIWGIQTTPKIKIFLWR 265
           Y W  T SG  T K+ Y     +++ R++ Q  + P       KIW  QT+PKI+ FLW+
Sbjct: 213 YTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWK 272

Query: 264 CTTNCLPVRDILETRIDLETVNCPMCDCARETAEHLLMDFSYAIAIW 124
           C +N LPV   L  R   +   C  C   +ET  HLL   ++A   W
Sbjct: 273 CLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTW 319


>ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 549

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = -3

Query: 447 VRPRLSGKGIYRWSLTKSGKCTTKTAYDLLDNRNAGQLTTNPMSKIWGIQTTPKIKIFLW 268
           +RP LS +  ++W+   SG  +TK+AY  L +  AG+       ++W ++   K+ IF W
Sbjct: 417 IRPELSDQ--WKWAAEPSGWYSTKSAYKALHHVTAGEEQDGKFKELWKLRVPLKVAIFAW 474

Query: 267 RCTTNCLPVR-DILETRIDLETVNCPMCDCARETAEHLLMDFSYAIAIWF 121
           R   + LP + ++ + R++L+   CP+C    ETA HL    S    +W+
Sbjct: 475 RLIQDKLPTKANLRKKRVELQEYLCPLCRSVEETASHLFFHCSKVSPLWW 524


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/98 (39%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = -3

Query: 411  WSLTKSGKCTTKTAYDL--LDNRNAGQLTTNPMSKIWGIQTTPKIKIFLWRCTTNCLPVR 238
            W   KSG+ TTKT Y L  L++  A QL  N    IW I T+PK+K FLW+     LPV 
Sbjct: 939  WLPVKSGEYTTKTGYALAKLNSFPASQLDFNWQKNIWKIHTSPKVKHFLWKAMKGALPVG 998

Query: 237  DILETRIDLETVNCPMCDCARETAEHLLMDFSYAIAIW 124
            + L  R     V C  C    E++ HL++   YA  +W
Sbjct: 999  EALSRRNIEAEVTCKRCG-QTESSLHLMLLCPYAKKVW 1035


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1094

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 42/122 (34%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
 Frame = -3

Query: 459  QIRCV-RPRLSGKGIYRWSLTKSGKCTTKTAYDLLDNRNAGQL--------TTNPM-SKI 310
            QI C  RP  S +  + W  T  G  T K+ YDL   +   Q+        + NP+  KI
Sbjct: 716  QIICQQRPMASRQDSFCWFGTNHGLYTVKSEYDLCSRQVHKQMFKEAEEQPSLNPLFGKI 775

Query: 309  WGIQTTPKIKIFLWRCTTNCLPVRDILETRIDLETVNCPMCDCARETAEHLLMDFSYAIA 130
            W + + PKIK+FLW+     + V D L TR  L    C MC    ET  H+L     A  
Sbjct: 776  WNLNSAPKIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQ 835

Query: 129  IW 124
            +W
Sbjct: 836  VW 837