BLASTX nr result

ID: Papaver22_contig00036702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00036702
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52193.1|AC012329_20 putative GTPase activator protein of R...    49   3e-08
ref|NP_190504.2| RabGAP/TBC domain-containing protein [Arabidops...    49   3e-08
ref|XP_002877668.1| rab GTPase activator [Arabidopsis lyrata sub...    49   3e-08
ref|XP_002518219.1| conserved hypothetical protein [Ricinus comm...    48   8e-08
ref|XP_003544717.1| PREDICTED: GTPase-activating protein gyp7-li...    49   1e-07

>gb|AAG52193.1|AC012329_20 putative GTPase activator protein of Rab-like small GTPases;
           20638-18455 [Arabidopsis thaliana]
           gi|6723405|emb|CAB66414.1| GTPase activating-like
           protein [Arabidopsis thaliana]
          Length = 554

 Score = 48.5 bits (114), Expect(3) = 3e-08
 Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +2

Query: 176 LFFCFVGFVKN--NNFRLDGVGFRRRLNTVGKISKFKDPPMLK 298
           +F+CFVGF+K   +NFRLD VG RR+LN V KI K KD  + +
Sbjct: 384 VFWCFVGFMKKARHNFRLDEVGIRRQLNIVSKIIKSKDSQLYR 426



 Score = 29.3 bits (64), Expect(3) = 3e-08
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 315 IEQAMCIWGVMWSAD*AATRARM 383
           ++Q +C+W VMW AD AA RA M
Sbjct: 453 LDQTLCLWEVMW-ADQAAIRAGM 474



 Score = 24.6 bits (52), Expect(3) = 3e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 9/38 (23%)
 Frame = +1

Query: 58  NHLEP------AGCIVVMQ*W**---DVGYCPGVSDFL 144
           NHLEP      A  + V++ +     D+GYC G+SD L
Sbjct: 334 NHLEPYKIFQAARLVAVLEAYALYDPDIGYCQGMSDLL 371


>ref|NP_190504.2| RabGAP/TBC domain-containing protein [Arabidopsis thaliana]
           gi|66792662|gb|AAY56433.1| At3g49350 [Arabidopsis
           thaliana] gi|110738525|dbj|BAF01188.1| GTPase activating
           -like protein [Arabidopsis thaliana]
           gi|332645010|gb|AEE78531.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
          Length = 539

 Score = 48.5 bits (114), Expect(3) = 3e-08
 Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +2

Query: 176 LFFCFVGFVKN--NNFRLDGVGFRRRLNTVGKISKFKDPPMLK 298
           +F+CFVGF+K   +NFRLD VG RR+LN V KI K KD  + +
Sbjct: 369 VFWCFVGFMKKARHNFRLDEVGIRRQLNIVSKIIKSKDSQLYR 411



 Score = 29.3 bits (64), Expect(3) = 3e-08
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 315 IEQAMCIWGVMWSAD*AATRARM 383
           ++Q +C+W VMW AD AA RA M
Sbjct: 438 LDQTLCLWEVMW-ADQAAIRAGM 459



 Score = 24.6 bits (52), Expect(3) = 3e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 9/38 (23%)
 Frame = +1

Query: 58  NHLEP------AGCIVVMQ*W**---DVGYCPGVSDFL 144
           NHLEP      A  + V++ +     D+GYC G+SD L
Sbjct: 319 NHLEPYKIFQAARLVAVLEAYALYDPDIGYCQGMSDLL 356


>ref|XP_002877668.1| rab GTPase activator [Arabidopsis lyrata subsp. lyrata]
           gi|297323506|gb|EFH53927.1| rab GTPase activator
           [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score = 48.5 bits (114), Expect(3) = 3e-08
 Identities = 24/43 (55%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +2

Query: 176 LFFCFVGFVKN--NNFRLDGVGFRRRLNTVGKISKFKDPPMLK 298
           +F+CFVGF+K   +NFRLD VG RR+LN V KI K KD  + +
Sbjct: 368 VFWCFVGFMKKARHNFRLDEVGIRRQLNIVSKIIKSKDSQLYR 410



 Score = 29.3 bits (64), Expect(3) = 3e-08
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 315 IEQAMCIWGVMWSAD*AATRARM 383
           ++Q +C+W VMW AD AA RA M
Sbjct: 437 LDQTLCLWEVMW-ADQAAIRAGM 458



 Score = 24.6 bits (52), Expect(3) = 3e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 9/38 (23%)
 Frame = +1

Query: 58  NHLEP------AGCIVVMQ*W**---DVGYCPGVSDFL 144
           NHLEP      A  + V++ +     D+GYC G+SD L
Sbjct: 318 NHLEPYKIFQAARLVAVLEAYALYDPDIGYCQGMSDLL 355


>ref|XP_002518219.1| conserved hypothetical protein [Ricinus communis]
           gi|223542624|gb|EEF44162.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 544

 Score = 47.8 bits (112), Expect(3) = 8e-08
 Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
 Frame = +2

Query: 179 FFCFVGFVKN--NNFRLDGVGFRRRLNTVGKISKFKD 283
           F+CFVGF+K   +NFRLD VG RR+LN V KI K KD
Sbjct: 376 FWCFVGFMKKARHNFRLDEVGIRRQLNIVSKIIKCKD 412



 Score = 30.4 bits (67), Expect(3) = 8e-08
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 318 EQAMCIWGVMWSAD*AATRARM 383
           EQ +C+W VMW AD AA RAR+
Sbjct: 445 EQTICLWEVMW-ADQAAIRARI 465



 Score = 22.7 bits (47), Expect(3) = 8e-08
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 109 DVGYCPGVSDFL 144
           ++GYC G+SD L
Sbjct: 351 EIGYCQGMSDLL 362


>ref|XP_003544717.1| PREDICTED: GTPase-activating protein gyp7-like [Glycine max]
          Length = 558

 Score = 48.9 bits (115), Expect(3) = 1e-07
 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
 Frame = +2

Query: 179 FFCFVGFVKN--NNFRLDGVGFRRRLNTVGKISKFKDPPMLK 298
           F+CFVGF+K    NFRLD VG RR+L+ V KI KFKD  + +
Sbjct: 389 FWCFVGFMKKARQNFRLDEVGIRRQLDIVAKIIKFKDAHLFR 430



 Score = 28.5 bits (62), Expect(3) = 1e-07
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +3

Query: 318 EQAMCIWGVMWSAD*AATRA 377
           EQ +C+W VMW AD AA RA
Sbjct: 458 EQTLCLWEVMW-ADQAAIRA 476



 Score = 22.7 bits (47), Expect(3) = 1e-07
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 109 DVGYCPGVSDFL 144
           ++GYC G+SD L
Sbjct: 364 EIGYCQGMSDLL 375


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