BLASTX nr result

ID: Papaver22_contig00036630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00036630
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   135   6e-30
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   112   4e-23
ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu...    90   3e-16
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score =  135 bits (339), Expect = 6e-30
 Identities = 79/153 (51%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
 Frame = -2

Query: 523 MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 344
           MD +ES  +V+NRIQKLEPEN SKIIGYLL+Q+HS+REMIRLAF PDNLI SLITKAK+ 
Sbjct: 1   MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60

Query: 343 LRLSPKQLSPQISPT-MSSESVSDFSL-FT-XXXXXXXXXXXXXXXXXXXXSYWDQQVIV 173
           L L+   LS  ISP+ +++  VSD  L FT                     +YWD QV  
Sbjct: 61  LGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVTG 120

Query: 172 DQQSIRNMDFNPQNCSDLVADDYHFPNQTQFLS 74
           DQQ + N+DF     SD V +DY   N  QFL+
Sbjct: 121 DQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLT 153


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score =  112 bits (280), Expect = 4e-23
 Identities = 73/154 (47%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
 Frame = -2

Query: 523 MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 344
           MD SES  +V+NRIQKLEPEN SKIIGYLL+Q+H +R+MIR AF  DN I  LI KAK  
Sbjct: 1   MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60

Query: 343 LRLS--PKQLSPQISPTMSSESVSDFSL-FTXXXXXXXXXXXXXXXXXXXXSYWDQQVIV 173
           L LS  P   SP   P ++   VSD  L FT                    SYWD QV  
Sbjct: 61  LGLSSKPAVSSPISPPQVNPSPVSDLPLQFT---PFSPASARPFPSPRPGNSYWDPQVNG 117

Query: 172 DQQSIRNM-DFNPQNCSDLVADDYHFPNQTQFLS 74
           DQQ +  + DF PQ  SD + DD+   +Q  FL+
Sbjct: 118 DQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLA 151


>ref|XP_002302838.1| predicted protein [Populus trichocarpa] gi|222844564|gb|EEE82111.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 61/156 (39%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
 Frame = -2

Query: 523 MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 344
           MD SES  +V+NRIQ +EPE   KIIGY+L+Q H +REMIRLAF PDNLI ++I KAK+ 
Sbjct: 1   MDFSESTKVVYNRIQAIEPEFVGKIIGYILIQNHGEREMIRLAFSPDNLIYAMICKAKSD 60

Query: 343 LRLSPKQLSPQISPTMSSES-VSDFSLFTXXXXXXXXXXXXXXXXXXXXSYWDQQVIVDQ 167
           L L+   +   ISP+  + S VSD                             QQ I + 
Sbjct: 61  LGLNKIPVLNLISPSQVNPSPVSDV---------------------------PQQFIPNS 93

Query: 166 QSIRNMDFNP-----QNCSDLVADDYHFPNQTQFLS 74
               +  F+P        S++V +DY   NQ QFL+
Sbjct: 94  TVSSHPIFSPVKVRTAGYSEMVPEDYRIQNQMQFLA 129


>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
           gi|223531534|gb|EEF33365.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 551

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
 Frame = -2

Query: 523 MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 344
           MD SE   +VFN+I+K+EPEN +KIIGYLL+Q+ SD+EMI LA  PD +I  +I KAK  
Sbjct: 1   MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60

Query: 343 L-RLSPKQLSPQISPTMSS-ESVSDF-SLFTXXXXXXXXXXXXXXXXXXXXSYWDQQVIV 173
           L +L+ K  +  +SP+M+S  +VS+F S F                     +YW+ QV  
Sbjct: 61  LNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSPQHFRVPSTYWESQV-- 118

Query: 172 DQQSIRNMDFNPQNCSDLVADDYHFPNQTQFLS 74
              S  + DF P    D + +     NQ QFLS
Sbjct: 119 --ASKHSSDFVPMTYQDSMTE---LQNQAQFLS 146


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 60/152 (39%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
 Frame = -2

Query: 523 MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 344
           MD SES  +V+NRIQ++EPE   KIIGY+L+Q H +REMIRLAF PDNLI + I+KAK+ 
Sbjct: 1   MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60

Query: 343 LRLSPKQLSPQISPT-MSSESVSDFSL-FTXXXXXXXXXXXXXXXXXXXXSYWDQQVIVD 170
           L L+   +   ISP+ ++   VSD  L F                     S+WD QV   
Sbjct: 61  LGLNKTPVPNPISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGSFWDAQV--- 117

Query: 169 QQSIRNMDFNPQNCSDLVADDYHFPNQTQFLS 74
                               DY   NQ QFL+
Sbjct: 118 -------------------TDYRLQNQMQFLT 130


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