BLASTX nr result

ID: Papaver22_contig00036575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00036575
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containi...    79   1e-12
ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-11
ref|XP_002525536.1| pentatricopeptide repeat-containing protein,...    65   2e-08
ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06

>ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Vitis vinifera]
          Length = 582

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 38/102 (37%), Positives = 65/102 (63%)
 Frame = +3

Query: 447 MRKKRLFKL*S**KRDGSELESKIHLMDVNISLDLVREVFPRLNYDGVSGLHFFCWLSET 626
           M  KR+ ++    + D  ++E K++LM++ +S+  V E+F  LN + +S + FF W+S +
Sbjct: 201 MSPKRISEIIKVIRSDEIDMEVKLNLMNLRLSVASVTEIFRVLNLERLSAMRFFEWISHS 260

Query: 627 QIDFKRSSVFCSMIIDNLGRVEDYDSMMLLFKDFSRKGICLS 752
           +    R+   CS+IIDN GR+ DY++M  L KDF+ K +CL+
Sbjct: 261 RSGLSRNYDICSLIIDNCGRLGDYETMRCLLKDFNSKRVCLT 302


>ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|222862827|gb|EEF00334.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 36/90 (40%), Positives = 56/90 (62%)
 Frame = +3

Query: 486 KRDGSELESKIHLMDVNISLDLVREVFPRLNYDGVSGLHFFCWLSETQIDFKRSSVFCSM 665
           KRD  +LE K+  + V +S+  V  VF  LN + VS L FF W+   Q + + +S  CS+
Sbjct: 70  KRDEYDLEYKLGSLSVKLSIASVTLVFHVLNSEKVSALRFFRWIRHWQPELRCNSDICSL 129

Query: 666 IIDNLGRVEDYDSMMLLFKDFSRKGICLSE 755
           +IDN GR++DYD+M  L  +F+   +CL++
Sbjct: 130 VIDNCGRLDDYDAMRSLLNEFNENQLCLTK 159


>ref|XP_002525536.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535215|gb|EEF36894.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 430

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 32/88 (36%), Positives = 54/88 (61%)
 Frame = +3

Query: 492 DGSELESKIHLMDVNISLDLVREVFPRLNYDGVSGLHFFCWLSETQIDFKRSSVFCSMII 671
           + +ELE+K++ + V +S+  VR VF  LN +  S L FF W+   Q + + +S  CS++I
Sbjct: 71  EDNELETKLNSLGVRLSIGSVRWVFQVLNREKKSALQFFHWIRRWQPELEGNSDICSLVI 130

Query: 672 DNLGRVEDYDSMMLLFKDFSRKGICLSE 755
           DN G ++DY +M  L   FS + + L++
Sbjct: 131 DNCGHLDDYKAMRCLLDGFSLQRLFLTK 158


>ref|XP_004141361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
           gi|449498723|ref|XP_004160616.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 494

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 29/89 (32%), Positives = 51/89 (57%)
 Frame = +3

Query: 486 KRDGSELESKIHLMDVNISLDLVREVFPRLNYDGVSGLHFFCWLSETQIDFKRSSVFCSM 665
           + +  +LESK+   +V ++  LV ++   LN   +S   FF W+S     F  +S   S+
Sbjct: 127 RENQEDLESKLDSPNVRLTNVLVGQILEMLNKHKISASRFFNWVSVQSCKFPCNSDVYSL 186

Query: 666 IIDNLGRVEDYDSMMLLFKDFSRKGICLS 752
           +IDN GR++DY+ ++ +  +F  KGI L+
Sbjct: 187 LIDNFGRLDDYEGILPVLIEFGLKGIELN 215


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