BLASTX nr result

ID: Papaver22_contig00036505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00036505
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    94   3e-17
ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2...    89   7e-16
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    87   3e-15
ref|XP_003612169.1| F-box family protein [Medicago truncatula] g...    84   3e-14
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    81   2e-13

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 79/227 (34%), Positives = 108/227 (47%), Gaps = 18/227 (7%)
 Frame = +3

Query: 96  VVGSCNGLICLRKRDQLDEIQYLICNPLTGEYVFVPQFDYTSLQDGDGVLVRRKSWLRNG 275
           VVGSCNGL+CL   D L      I NP TG Y  +P+    SLQ  D  +V         
Sbjct: 124 VVGSCNGLLCLS--DSLYNDSLYIYNPFTGCYKELPK----SLQYPDQEVV--------- 168

Query: 276 ELVSDGFGYCHLTKEYKVIRIYYSKVNVG-------------NILIYTVGSHEWRNIGIL 416
                GFG+   TKEYKVIRI Y +   G              + I T+G  EWR++G +
Sbjct: 169 ----SGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEWRSLGKV 224

Query: 417 RHGLC-SSSGVFVNGFLHWLTFDILE---QKVFSFDLKDEKHQLLSMPPCVQLVDRQLKL 584
            + L   +SG  VNG LHW++        +++ SFDL DE+ + +S P C  L      L
Sbjct: 225 SYRLVRRASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNRCNYHL 284

Query: 585 LGGNLCIVLANHCAC-NIEIWAHKNMKEHNQSCGYHNNSRNWVKEFS 722
           +    C+  A +C    +EIW    MKE+N          +WVKE++
Sbjct: 285 VVLRGCLSAAVYCNYGRLEIWV---MKEYNV-------KESWVKEYN 321


>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 73/232 (31%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
 Frame = +3

Query: 57  VTRFHQKFKGDHLVVGSCNGLICLRKRDQ---LDEIQYLICNPLTGEYVFVPQFDYTSLQ 227
           V   +  +  D L+  SCNGL+C+ K  Q    D+I   +CNP+ GEY+ +P      L 
Sbjct: 113 VQEINLPYNNDFLIENSCNGLLCISKTFQDGSHDDIY--LCNPILGEYISIP------LA 164

Query: 228 DGDGVLVRRKSWLRNGELVSDGFGYCHLTKEYKVIRIYYSKVNVGN---ILIYTVGSHEW 398
            G G   +R          S   GY  +TKEYKV+  +YSK    +     IYT+G+ +W
Sbjct: 165 AGQGTRHKR----------SFSLGYSAITKEYKVLHTFYSKKGPDSQPEAEIYTIGTGKW 214

Query: 399 RNIGILRHGL-CSSSGVFVNGFLHW--LTFDILEQKVFSFDLKDEKHQLLSMPPCVQLVD 569
           R+I    H L       FV G +HW     D     + SF+ ++E+   LS+PP      
Sbjct: 215 RSIHKALHILDIFMFDSFVCGSIHWELRGEDNCVNSIGSFNFENEQFSQLSLPPRYDEGG 274

Query: 570 RQLKLLGGNLCIVLANHCA-CNIEIWAHKNMKEHNQSCGYHNNSRNWVKEFS 722
             L +  G L +   N C     EIW    MKE       + N ++W K+F+
Sbjct: 275 VTLTVFEGCLGVSFFNTCCETQFEIWV---MKE-------YGNKQSWTKQFT 316


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 77/229 (33%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
 Frame = +3

Query: 96  VVGSCNGLICLRKRDQLDEIQYLICNPLTGEYVFVPQFDYTSLQDGDGVLVRRKSWLRNG 275
           VVGSCNGL+CL   D L      I NP TG Y  +P+    SLQ  D  +V         
Sbjct: 123 VVGSCNGLLCLS--DSLFNDSLYIYNPFTGRYKELPK----SLQYPDQEVVF-------- 168

Query: 276 ELVSDGFGYCHLTKEYKVIRIYYSKVNVG-------------NILIYTVGSHEWRNIGIL 416
                GFG+   T EYKVIRI Y +   G              + I T+G   WR++G +
Sbjct: 169 -----GFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKV 223

Query: 417 RHGLC-SSSGVFVNGFLHWLTFDILE---QKVFSFDLKDEKHQLLSMPPC--VQLVDRQL 578
            + L   +S   VNG LHW++        +++ SFDL DE+ + +  P C  +   D  L
Sbjct: 224 SYRLVRRASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDCGGLNRCDYHL 283

Query: 579 KLLGGNLCIVLANHCAC-NIEIWAHKNMKEHNQSCGYHNNSRNWVKEFS 722
            +L G  C+ +A +C    +EIW    MKE+N          +WVKE++
Sbjct: 284 AVLRG--CLSVAVYCNYGRLEIWV---MKEYNV-------KESWVKEYN 320


>ref|XP_003612169.1| F-box family protein [Medicago truncatula]
            gi|355513504|gb|AES95127.1| F-box family protein
            [Medicago truncatula]
          Length = 1154

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 59/174 (33%), Positives = 86/174 (49%), Gaps = 19/174 (10%)
 Frame = +3

Query: 96   VVGSCNGLICLRKRDQLDEIQYLICNPLTGEYVFVPQFDYTSLQDGDGVLVRRKSWLRNG 275
            V  SCNGL+CL      DE    ICNP+TGE++ +P+    +  +   + +R       G
Sbjct: 854  VANSCNGLLCLCCPS--DEHPLSICNPVTGEFIKLPEATINTHDERSPLNMR-------G 904

Query: 276  ELVSDGFGYCHLTKEYKVIRIYYSKVNVGN--------ILIYTVGSHEWRNIGI------ 413
            ++   GFG+   T EYKVIRI+ S V  GN        + IYT+G+  WRN  +      
Sbjct: 905  QV---GFGFQPKTNEYKVIRIWGSDVKRGNRWVFDRMVLEIYTLGTPSWRNAEVDPQISI 961

Query: 414  -----LRHGLCSSSGVFVNGFLHWLTFDILEQKVFSFDLKDEKHQLLSMPPCVQ 560
                 LR+  C      VNG +HW+ F   E+ +  F L++E+ Q    PP +Q
Sbjct: 962  GSNIWLRYPTC------VNGTIHWIRFKGQERSILCFCLENERLQSFPSPPVLQ 1009



 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
 Frame = +3

Query: 96  VVGSCNGLICLRKRDQLDEIQYLICNPLTGEYVFVPQFDYTSLQDGDGVLVRRKSWLRNG 275
           VV SCNGL+CLR     +    +ICNP+TGE++ +P+     + +    +V + S +   
Sbjct: 167 VVNSCNGLLCLRH--PFEGRPLVICNPVTGEFIRLPKATANLIHND---IVDKVSGIA-- 219

Query: 276 ELVSDGFGYCHLTKEYKVIRIYYSKVNVGN--------ILIYTVGSHEWRNIGI-----L 416
                 FG+   T EYKV+ I+   V  GN        + I T+G+  WRN  +     +
Sbjct: 220 -----AFGFQPKTNEYKVMYIWDKYVRRGNGWVFDHIVLEINTLGTPSWRNAEVDPQISI 274

Query: 417 RHGLCSSSGVFVNGFLHWLTFDILEQKVFSFDLKDEKHQLLSMPPCVQ 560
             GL      +VNG LHW+ F+  E+ +  F  + E+ Q    PP  Q
Sbjct: 275 GSGLSLHYPTYVNGALHWIRFEDEERSILCFCFESERLQSFPSPPVFQ 322


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 19/228 (8%)
 Frame = +3

Query: 96  VVGSCNGLICLRKRDQLDEIQYLICNPLTGEYVFVPQFDYTSLQDGDGVLVRRKSWLRNG 275
           VVGSCNGL+CL   D L +    + NP T ++  +P+    SLQ  D             
Sbjct: 124 VVGSCNGLLCL--ADSLFKDAVYVHNPFTRDFKQLPK----SLQYPD------------- 164

Query: 276 ELVSDGFGYCHLTKEYKVIRIYYSKVNVG-------------NILIYTVGSHEWRNIGIL 416
           + V  GFGY  +T+ YKV+++ Y +   G              + + T+GS  WR++G +
Sbjct: 165 QEVVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKV 224

Query: 417 RHGLCS-SSGVFVNGFLHWLTFD--ILEQKVFSFDLKDEKHQLLSMPPC--VQLVDRQLK 581
            + L    S   VNG LHW+T     + + + SFDL DE+ + +  P C  +   +  L 
Sbjct: 225 SYQLDRWPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNYHLL 284

Query: 582 LLGGNLCIVLANHCA-CNIEIWAHKNMKEHNQSCGYHNNSRNWVKEFS 722
           +LGG  C+  A H +   +E+W    MKE++          +W+KEF+
Sbjct: 285 VLGG--CLSAAVHRSNGKLEVWV---MKEYDV-------KESWIKEFN 320


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