BLASTX nr result
ID: Papaver22_contig00036473
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver22_contig00036473 (692 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 45 2e-06 >gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa] Length = 1656 Score = 45.4 bits (106), Expect(3) = 2e-06 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 10/82 (12%) Frame = +1 Query: 166 LTDVPFMGNPYTWSTATS--YFIRTRLGRALGDISCHQLFPNT-VIH-------HAPMLL 315 L D+ F G ++W FI+ RL RALG+I+ PNT ++H H P+LL Sbjct: 775 LRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLL 834 Query: 316 STDPTLSSISRPFRVYESWFQH 381 ++P + + +R FR + W H Sbjct: 835 DSNPKMLNKTRLFRFEQMWTTH 856 Score = 29.6 bits (65), Expect(3) = 2e-06 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = +2 Query: 2 WQLIGEMGDYMDLPWVIIGDFNSTLYSADR 91 W+L+ LPW+++GDFN L +++ Sbjct: 723 WRLMYSRFPVQSLPWLVLGDFNEVLDPSEK 752 Score = 21.2 bits (43), Expect(3) = 2e-06 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = +2 Query: 470 ALKKWKHEVFGEPSL 514 ALK W E F PS+ Sbjct: 889 ALKMWSKEKFSNPSV 903