BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00036473
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    45   2e-06

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 45.4 bits (106), Expect(3) = 2e-06
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
 Frame = +1

Query: 166  LTDVPFMGNPYTWSTATS--YFIRTRLGRALGDISCHQLFPNT-VIH-------HAPMLL 315
            L D+ F G  ++W        FI+ RL RALG+I+     PNT ++H       H P+LL
Sbjct: 775  LRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLL 834

Query: 316  STDPTLSSISRPFRVYESWFQH 381
             ++P + + +R FR  + W  H
Sbjct: 835  DSNPKMLNKTRLFRFEQMWTTH 856



 Score = 29.6 bits (65), Expect(3) = 2e-06
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 2   WQLIGEMGDYMDLPWVIIGDFNSTLYSADR 91
           W+L+        LPW+++GDFN  L  +++
Sbjct: 723 WRLMYSRFPVQSLPWLVLGDFNEVLDPSEK 752



 Score = 21.2 bits (43), Expect(3) = 2e-06
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 470 ALKKWKHEVFGEPSL 514
           ALK W  E F  PS+
Sbjct: 889 ALKMWSKEKFSNPSV 903