BLASTX nr result

ID: Papaver22_contig00036219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00036219
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35789.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,...   140   2e-31
ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26

>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  153 bits (387), Expect = 2e-35
 Identities = 77/136 (56%), Positives = 97/136 (71%)
 Frame = -1

Query: 410 YSTNTNPSSQQQHEGEGESIHNKTYWTKRIHSLCTQHGKVDEAXXXXXXXXLHGYSPDSL 231
           +S  + P+ Q + E E ESI NK +W+++IH+LCT+   VDEA        L GY PDSL
Sbjct: 270 FSAQSTPNQQHEEEKEEESIINKAFWSRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSL 329

Query: 230 NLSSIIHGLCSSYRFTDAHNRLLQFINTHPSVLDERTCNVLIARLLDAKTPQQTLTVIRS 51
           NLSSIIH LC + RF++AH+RLL    +H  V D+RTCNVLIARLLD++TP  TL V R 
Sbjct: 330 NLSSIIHALCDANRFSEAHHRLLLSFASH-CVPDQRTCNVLIARLLDSRTPHATLHVFRG 388

Query: 50  LVAAKPAFVPSLINYN 3
           L+AA+P FVPSLINYN
Sbjct: 389 LIAARPEFVPSLINYN 404


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Vitis vinifera]
          Length = 680

 Score =  153 bits (387), Expect = 2e-35
 Identities = 77/136 (56%), Positives = 97/136 (71%)
 Frame = -1

Query: 410 YSTNTNPSSQQQHEGEGESIHNKTYWTKRIHSLCTQHGKVDEAXXXXXXXXLHGYSPDSL 231
           +S  + P+ Q + E E ESI NK +W+++IH+LCT+   VDEA        L GY PDSL
Sbjct: 38  FSAQSTPNQQHEEEKEEESIINKAFWSRKIHNLCTRDRNVDEALRLLDLLRLRGYRPDSL 97

Query: 230 NLSSIIHGLCSSYRFTDAHNRLLQFINTHPSVLDERTCNVLIARLLDAKTPQQTLTVIRS 51
           NLSSIIH LC + RF++AH+RLL    +H  V D+RTCNVLIARLLD++TP  TL V R 
Sbjct: 98  NLSSIIHALCDANRFSEAHHRLLLSFASH-CVPDQRTCNVLIARLLDSRTPHATLHVFRG 156

Query: 50  LVAAKPAFVPSLINYN 3
           L+AA+P FVPSLINYN
Sbjct: 157 LIAARPEFVPSLINYN 172


>ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|222869094|gb|EEF06225.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  146 bits (369), Expect = 2e-33
 Identities = 76/136 (55%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
 Frame = -1

Query: 401 NTNPSSQQQ---HEGEGESIHNKTYWTKRIHSLCTQHGKVDEAXXXXXXXXLHGYSPDSL 231
           +T+P +Q+Q   H+ +   I N++YWT++IH LCT+H  VDEA        L GY PDSL
Sbjct: 27  STHPQNQEQALNHQQQSICITNRSYWTQKIHDLCTKHRNVDEALRLLDHLRLRGYLPDSL 86

Query: 230 NLSSIIHGLCSSYRFTDAHNRLLQFINTHPSVLDERTCNVLIARLLDAKTPQQTLTVIRS 51
           NLSSIIHGLC + RF +AH RL+ F+ T   V DERTCNVL+ARLL +K P +TL VI  
Sbjct: 87  NLSSIIHGLCDANRFNEAHQRLIIFL-TSLCVPDERTCNVLVARLLHSKDPFRTLNVIHR 145

Query: 50  LVAAKPAFVPSLINYN 3
           L+  KP FVPSLINYN
Sbjct: 146 LIEFKPEFVPSLINYN 161


>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score =  140 bits (352), Expect = 2e-31
 Identities = 81/159 (50%), Positives = 94/159 (59%), Gaps = 4/159 (2%)
 Frame = -1

Query: 467 VAVKRSKDPIILKRLHARVYSTNTNPSSQ----QQHEGEGESIHNKTYWTKRIHSLCTQH 300
           + +K S  P+     H R Y     P  Q    QQ + +  SI N +YWTK+IH LCTQ 
Sbjct: 12  ILLKPSSVPLTFLSTHHRPYHEVLLPQEQYQQLQQEQEQPISITNSSYWTKKIHLLCTQQ 71

Query: 299 GKVDEAXXXXXXXXLHGYSPDSLNLSSIIHGLCSSYRFTDAHNRLLQFINTHPSVLDERT 120
            KVDEA        L GY PDSLN SSIIH LC + RF +AH+R L  I     V DERT
Sbjct: 72  RKVDEALTLLDHLRLSGYRPDSLNFSSIIHALCDAKRFKEAHHRFLLCI-ASDCVPDERT 130

Query: 119 CNVLIARLLDAKTPQQTLTVIRSLVAAKPAFVPSLINYN 3
           CNVLIARLLD++ P  TL V+  L   KP FVPSLINYN
Sbjct: 131 CNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYN 169


>ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Cucumis sativus]
          Length = 681

 Score =  122 bits (307), Expect = 3e-26
 Identities = 67/138 (48%), Positives = 89/138 (64%)
 Frame = -1

Query: 416 RVYSTNTNPSSQQQHEGEGESIHNKTYWTKRIHSLCTQHGKVDEAXXXXXXXXLHGYSPD 237
           R++  N + S +   E   ES+ + +YWTK+IH LCT+   VDEA        LHGY   
Sbjct: 32  RLHPENGSDSREWAPE---ESVADVSYWTKKIHGLCTKDRNVDEALQLLDALRLHGYQFH 88

Query: 236 SLNLSSIIHGLCSSYRFTDAHNRLLQFINTHPSVLDERTCNVLIARLLDAKTPQQTLTVI 57
            LNL+S+IHGLC ++RF +AH R +  I +   V DERTCNVLIARLLD ++P  TL ++
Sbjct: 89  PLNLASVIHGLCDAHRFHEAHCRFMLSIASR-CVPDERTCNVLIARLLDYRSPYCTLRLL 147

Query: 56  RSLVAAKPAFVPSLINYN 3
             L  AKP FVPS++NYN
Sbjct: 148 VCLFDAKPEFVPSIVNYN 165


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