BLASTX nr result

ID: Papaver22_contig00036054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00036054
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]        68   7e-10
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]        68   9e-10
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...    67   1e-09
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana...    67   1e-09
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...    65   6e-09

>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/62 (54%), Positives = 44/62 (70%)
 Frame = +2

Query: 299 MGRTIQVYGFPSYVNAEMVKEFLENYTGKGTVYALDIPMSKNKGPNPRVLANVQFISKQD 478
           MG+TIQV+GFP  ++AE VK+FLEN+TG GTVYAL++  SK      R  A VQF + + 
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKG---GRRAFAKVQFANNKS 57

Query: 479 AE 484
           AE
Sbjct: 58  AE 59


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/62 (56%), Positives = 43/62 (69%)
 Frame = +2

Query: 299 MGRTIQVYGFPSYVNAEMVKEFLENYTGKGTVYALDIPMSKNKGPNPRVLANVQFISKQD 478
           MG+TIQV+GFP  ++AE VK FLEN+TG GTVYAL++  SK      R  A VQF S + 
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKG---GRRSFARVQFASNKS 57

Query: 479 AE 484
           AE
Sbjct: 58  AE 59


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
           gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
           [Nicotiana glutinosa]
          Length = 1117

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/62 (54%), Positives = 43/62 (69%)
 Frame = +2

Query: 299 MGRTIQVYGFPSYVNAEMVKEFLENYTGKGTVYALDIPMSKNKGPNPRVLANVQFISKQD 478
           MG+TIQV+GFP  ++AE VK FLEN+TG GTVYAL++  SK      R  A VQF + + 
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKG---GRRAFAKVQFANNKS 57

Query: 479 AE 484
           AE
Sbjct: 58  AE 59


>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
          Length = 1044

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/62 (54%), Positives = 43/62 (69%)
 Frame = +2

Query: 299 MGRTIQVYGFPSYVNAEMVKEFLENYTGKGTVYALDIPMSKNKGPNPRVLANVQFISKQD 478
           MG+TIQV+GFP  ++AE VK FLEN+TG GTVYAL++  SK      R  A VQF + + 
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKG---GRRAFAKVQFANNKS 57

Query: 479 AE 484
           AE
Sbjct: 58  AE 59


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/59 (57%), Positives = 43/59 (72%)
 Frame = +2

Query: 299 MGRTIQVYGFPSYVNAEMVKEFLENYTGKGTVYALDIPMSKNKGPNPRVLANVQFISKQ 475
           MG+TIQV+GFP+ V+AE VK+FLE  TG GTVYA+ +   K  G  PRV A VQF S++
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGG--PRVYAIVQFTSER 57


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