BLASTX nr result

ID: Papaver22_contig00036028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00036028
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   223   7e-56
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   219   7e-55
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   213   7e-53
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    209   6e-52
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  207   4e-51

>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  223 bits (567), Expect = 7e-56
 Identities = 129/343 (37%), Positives = 183/343 (53%), Gaps = 31/343 (9%)
 Frame = +1

Query: 7    PPYNLIRYNYYIECQICIKPGHSSKECRYRY---------ATNDNYMDQAHYTTSAYPGD 159
            PP+N    N    CQ+C K GH   +C YR+          ++ N   +A+Y+ S     
Sbjct: 297  PPWNSDNQNEKPACQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPRAYYSFS----- 351

Query: 160  DYDDFWYPEPEAFAVYNENSPSTSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGN 339
                     P+   V   +   +   W PDSGA++H+T N  NL   +E+ G + V VGN
Sbjct: 352  ---------PQVNGVIPTSEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGN 402

Query: 340  GSGLNISHIGTS--IIKHDNYTFTLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFY 513
            G+GL+I HIG S  +    +    L+++LHVPSIT+NL+SV +F+K+N  FFEFH D  +
Sbjct: 403  GTGLSIKHIGQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCF 462

Query: 514  VKDVNTNKVLLTGPVRDGLY-----HLGFTFAQ--------------LKQALTSTAPSSS 636
            VKD  T  VL+ G VRDGLY     HL     Q               K   TS + +  
Sbjct: 463  VKDQVTQAVLMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFD 522

Query: 637  TWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQNICSACQLAKNHALPFPTSSKSVYGPLDL 816
             WH +LGHP+  T+KNVLS  +    + +  N CS+C L K H  PF  S  +   PL+L
Sbjct: 523  LWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLEL 582

Query: 817  IHSDVWVSPL-CSINGFKYYVSFIDSFSRFTWLYPLAYKSEVL 942
            IH D+W   L  S +G++YY+ F+D+FSRF+W++ L  KSE +
Sbjct: 583  IHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAI 625


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  219 bits (558), Expect = 7e-55
 Identities = 117/299 (39%), Positives = 168/299 (56%), Gaps = 1/299 (0%)
 Frame = +1

Query: 46   CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 225
            CQ+C K GH++ +C YRY                      D+ + P+ +  A    NS  
Sbjct: 278  CQVCFKRGHTAADCWYRY----------------------DEDYVPDAKHVAAAAVNSYG 315

Query: 226  TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNY-TF 402
              + W  D+GAT H+T  L  L M  +Y G + +   +G+G++ISHIG +I+ + N    
Sbjct: 316  VDTNWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASGAGMDISHIGHAIVHNPNSRNI 375

Query: 403  TLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLG 582
             L NVL+VP   +NL+SVH+   +N+ F E H D F++KD  T K LL G     LY L 
Sbjct: 376  HLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITRKTLLKGRSWRRLYPL- 434

Query: 583  FTFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQNICSACQLAKN 762
               + LKQA ++   S   WH++LGHP+  T+K V++       D  S+++C+ACQ AK+
Sbjct: 435  -PHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKS 493

Query: 763  HALPFPTSSKSVYGPLDLIHSDVWVSPLCSINGFKYYVSFIDSFSRFTWLYPLAYKSEV 939
            H LPFP SS     PL+L+ SDVW     S+   KYYVSFID FS+FTW+Y + +KS+V
Sbjct: 494  HQLPFPISSSVSKHPLELVFSDVWGPAPESVGRKKYYVSFIDDFSKFTWIYLIQHKSQV 552


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  213 bits (541), Expect = 7e-53
 Identities = 117/300 (39%), Positives = 164/300 (54%), Gaps = 2/300 (0%)
 Frame = +1

Query: 46   CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 225
            CQ+C K GH   +C YRY  ++N++  +    +A  G D                     
Sbjct: 1242 CQLCGKIGHVVADCWYRY--DENFIPDSKTAAAASYGVD--------------------- 1278

Query: 226  TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 405
              + W  D+GAT HIT  L  L  H +Y G + +   +G+G++I H+G SII        
Sbjct: 1279 --TNWYMDTGATDHITGELDKLTTHEKYNGKEQIHTASGAGMDIKHVGHSIIHTPICNIQ 1336

Query: 406  LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHL-G 582
            L N+LHVP   +NLIS H+ + +N+ F E H   F +KD  T  +LL GP R+GLY L  
Sbjct: 1337 LKNILHVPKAEKNLISAHRLAVDNHAFVEVHPRFFAIKDQVTKNLLLRGPCRNGLYPLPT 1396

Query: 583  FTFAQLKQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVH-EVLDDHLSQNICSACQLAK 759
             + A  KQ L +  P+ S WH++LGHP+   ++ V+S  +   L D     +C+ACQ AK
Sbjct: 1397 SSLATSKQVLGAIKPTMSRWHSRLGHPSLAIVQKVVSSNNLPCLGDVNESGVCNACQQAK 1456

Query: 760  NHALPFPTSSKSVYGPLDLIHSDVWVSPLCSINGFKYYVSFIDSFSRFTWLYPLAYKSEV 939
            +H LP+P S      PL+L+ SDVW     S+ G KYYVSFID FS+FTW+Y L  K+EV
Sbjct: 1457 SHQLPYPKSFSVSNNPLELVFSDVWGPAPTSVGGRKYYVSFIDDFSKFTWIYLLKSKAEV 1516


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  209 bits (533), Expect = 6e-52
 Identities = 115/309 (37%), Positives = 173/309 (55%), Gaps = 7/309 (2%)
 Frame = +1

Query: 34   YYIECQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDF----WYPEPEAFA 201
            Y   CQIC   GHS++ C        +   Q+    S YP + Y       W P      
Sbjct: 250  YQGRCQICGVHGHSARRCSQFQPYGGSGGSQS--VPSGYPTNGYSPSPMAPWQPRA---- 303

Query: 202  VYNENSPSTSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSII 381
              N  +    + WV DSGATHH+TS+L NL+MH  Y G + V + +GSGL ISH G++++
Sbjct: 304  --NIATAPPFNPWVLDSGATHHLTSDLANLSMHQPYTGGEEVTIADGSGLPISHTGSALL 361

Query: 382  KHDNYTFTLSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVR 561
               + +  L ++L+VP++++NLISV++    N    EF    F VKD+NT   LL G  R
Sbjct: 362  PTPSRSLALKDILYVPNVSKNLISVYRLCNANQVSVEFFPAHFQVKDLNTGARLLQGRTR 421

Query: 562  DGLYHLGFTFAQLKQALTSTAPSS--STWHNKLGHPAYKTLKNVLSLVHEVLDDHLSQNI 735
            + LY        +     S +P +  S+WH +LGHPA   LK+V+S  H  L + + + +
Sbjct: 422  NELYEWPVNQKSITILTASPSPKTDLSSWHQRLGHPALPILKDVVSHFHLPLSNTIPKQL 481

Query: 736  -CSACQLAKNHALPFPTSSKSVYGPLDLIHSDVWVSPLCSINGFKYYVSFIDSFSRFTWL 912
             CS C + K+H LPF T++     PL+ +++DVW SP  S++ +KYY+  +D F+R+TW+
Sbjct: 482  PCSDCSINKSHKLPFFTNTIVSSQPLEYLYTDVWTSPCISVDNYKYYLVIVDHFTRYTWM 541

Query: 913  YPLAYKSEV 939
            YPL  KS+V
Sbjct: 542  YPLKQKSQV 550


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  207 bits (526), Expect = 4e-51
 Identities = 116/301 (38%), Positives = 164/301 (54%), Gaps = 3/301 (0%)
 Frame = +1

Query: 46   CQICIKPGHSSKECRYRYATNDNYMDQAHYTTSAYPGDDYDDFWYPEPEAFAVYNENSPS 225
            CQ+C K GH++ +C YR+                       D  Y   E       NS  
Sbjct: 284  CQVCFKRGHTAADCWYRF-----------------------DEDYVADEKLVAAATNSYG 320

Query: 226  TSSGWVPDSGATHHITSNL*NLNMHSEYQGHDHVRVGNGSGLNISHIGTSIIKHDNYTFT 405
              + W  D+GAT HIT  L  L    +Y G + +   +G+G++ISHIG +I+   +    
Sbjct: 321  IDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIH 380

Query: 406  LSNVLHVPSITRNLISVHQFSKENNYFFEFHHDKFYVKDVNTNKVLLTGPVRDGLYHLGF 585
            L+NVL+VP   +NLIS  Q + +N+ F E H   F +KD  T  VLL G  R GLY +  
Sbjct: 381  LNNVLYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPK 440

Query: 586  TFAQL--KQALTSTAPSSSTWHNKLGHPAYKTLKNVLSLVHEVLD-DHLSQNICSACQLA 756
            +F +   KQAL +   S S WH++LGHP+   +K V+S  +     + ++Q++C+ACQ A
Sbjct: 441  SFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEA 500

Query: 757  KNHALPFPTSSKSVYGPLDLIHSDVWVSPLCSINGFKYYVSFIDSFSRFTWLYPLAYKSE 936
            K+H LP+  S+     PL+L+ SDVW     S+   KYYVSFID FS+FTW+Y L YKSE
Sbjct: 501  KSHQLPYIRSTSVSQFPLELVFSDVWGPAPESVGRNKYYVSFIDDFSKFTWIYLLKYKSE 560

Query: 937  V 939
            V
Sbjct: 561  V 561


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