BLASTX nr result
ID: Papaver22_contig00035968
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00035968
(600 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 77 3e-24
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 68 5e-23
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 68 5e-23
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 68 5e-23
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 65 2e-22
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 77.4 bits (189), Expect(2) = 3e-24
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Frame = -2
Query: 338 YANWSGQQANLNKFSILFSKGVTADRKKEIVDALGVKQMHTGDKYLGFHLLKPAHRLKSY 159
Y SGQQ NL+K ++FS+ V +R+ IV+ LGVK++ +KYLG + + ++
Sbjct: 709 YERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTF 768
Query: 158 DFLFEKFEGKLAGWKRIFLTHAGKLILMKTV---MPPYFMSTSILPRGILKKL 9
+ E+ KL GWK L+ GK +L+K+V +P Y MS LP G++ ++
Sbjct: 769 ACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEI 821
Score = 60.1 bits (144), Expect(2) = 3e-24
Identities = 29/62 (46%), Positives = 37/62 (59%)
Frame = -3
Query: 595 FLVNGTPEGFFKSERGLQQGCPLSPYLFILCSQGLSWMLRRMEEENLYRGFRVNRWAPSV 416
F VNG EG RGL+QG P+SPYLF+LC+ S +L + E G ++ R AP V
Sbjct: 620 FNVNGVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVV 679
Query: 415 SH 410
SH
Sbjct: 680 SH 681
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 68.2 bits (165), Expect(2) = 5e-23
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = -3
Query: 589 VNGTPEGFFKSERGLQQGCPLSPYLFILCSQGLSWMLRRMEEENLYRGFRVNRWAPSVSH 410
VNG F ERGL+QG PLSPYLF+LC++G S +L + EEE G R+ + APSVSH
Sbjct: 848 VNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSH 907
Score = 65.1 bits (157), Expect(2) = 5e-23
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Frame = -2
Query: 362 NGGPLQQT------YANWSGQQANLNKFSILFSKGVTADRKKEIVDALGVKQMHTGDKYL 201
NGG QQ Y SGQ N +K +++FS ++ K ++ AL +++ T +KYL
Sbjct: 921 NGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYL 980
Query: 200 GFHLLKPAHRLKSYDFLFEKFEGKLAGWKRIFLTHAGKLILMKTV---MPPYFMSTSILP 30
G + R K + +L E+ ++ GWK L+ AGK IL+K V +P + M L
Sbjct: 981 GLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELT 1040
Query: 29 RGILKKLSR 3
+ + ++S+
Sbjct: 1041 KDLCDQISK 1049
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 68.2 bits (165), Expect(2) = 5e-23
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = -3
Query: 589 VNGTPEGFFKSERGLQQGCPLSPYLFILCSQGLSWMLRRMEEENLYRGFRVNRWAPSVSH 410
VNG F ERGL+QG PLSPYLF+LC++G S +L + EEE G R+ + APSVSH
Sbjct: 820 VNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSH 879
Score = 65.1 bits (157), Expect(2) = 5e-23
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Frame = -2
Query: 362 NGGPLQQT------YANWSGQQANLNKFSILFSKGVTADRKKEIVDALGVKQMHTGDKYL 201
NGG QQ Y SGQ N +K +++FS ++ K ++ AL +++ T +KYL
Sbjct: 893 NGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYL 952
Query: 200 GFHLLKPAHRLKSYDFLFEKFEGKLAGWKRIFLTHAGKLILMKT---VMPPYFMSTSILP 30
G + R K + +L E+ ++ GWK L+ AGK IL+K V+P + M L
Sbjct: 953 GLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELT 1012
Query: 29 RGILKKLSR 3
+ + ++S+
Sbjct: 1013 KDLCDQISK 1021
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 68.2 bits (165), Expect(2) = 5e-23
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = -3
Query: 589 VNGTPEGFFKSERGLQQGCPLSPYLFILCSQGLSWMLRRMEEENLYRGFRVNRWAPSVSH 410
VNG F ERGL+QG PLSPYLF+LC++G S +L + EEE G R+ + APSVSH
Sbjct: 816 VNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSH 875
Score = 65.1 bits (157), Expect(2) = 5e-23
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Frame = -2
Query: 362 NGGPLQQT------YANWSGQQANLNKFSILFSKGVTADRKKEIVDALGVKQMHTGDKYL 201
NGG QQ Y SGQ N +K +++FS ++ K ++ AL +++ T +KYL
Sbjct: 889 NGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYL 948
Query: 200 GFHLLKPAHRLKSYDFLFEKFEGKLAGWKRIFLTHAGKLILMKT---VMPPYFMSTSILP 30
G + R K + +L E+ ++ GWK L+ AGK IL+K V+P + M L
Sbjct: 949 GLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELT 1008
Query: 29 RGILKKLSR 3
+ + ++S+
Sbjct: 1009 KDLCDQISK 1017
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 65.5 bits (158), Expect(2) = 2e-22
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -3
Query: 589 VNGTPEGFFKSERGLQQGCPLSPYLFILCSQGLSWMLRRMEEENLYRGFRVNRWAPSVSH 410
VNG F RGL+QG PLSPYLF+LC++G S +L + EEE G R+ + APSVSH
Sbjct: 875 VNGELSESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSH 934
Score = 65.5 bits (158), Expect(2) = 2e-22
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Frame = -2
Query: 362 NGGPLQQT------YANWSGQQANLNKFSILFSKGVTADRKKEIVDALGVKQMHTGDKYL 201
NGG QQ Y SGQ N +K +++FS ++ K+ ++ AL +++ T ++YL
Sbjct: 948 NGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYL 1007
Query: 200 GFHLLKPAHRLKSYDFLFEKFEGKLAGWKRIFLTHAGKLILMKTV---MPPYFMSTSILP 30
G + R K + +L E+ ++ GWK L+ AGK IL+K V +P + M L
Sbjct: 1008 GLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELT 1067
Query: 29 RGILKKLSR 3
+ + ++S+
Sbjct: 1068 KDLCDQISK 1076