BLASTX nr result

ID: Papaver22_contig00035444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00035444
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v...    66   2e-14
ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago ...    71   2e-13
ref|XP_002331831.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12
ref|XP_002865941.1| hypothetical protein ARALYDRAFT_331651 [Arab...    67   5e-09
emb|CBI22579.3| unnamed protein product [Vitis vinifera]               66   6e-09

>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
          Length = 1269

 Score = 66.2 bits (160), Expect(2) = 2e-14
 Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = -3

Query: 732  KCSHMIATTLDTNNTFSAAQVTRKLKQLGL--IKKRPVESKTLLRDEADNDNSTVDEQEE 559
            +C++MIA+ L  ++  +AAQV+RKLKQLGL   +++  E    LRDE  ND  T   Q +
Sbjct: 1031 RCTYMIASALAGDDILTAAQVSRKLKQLGLHVPRRKRAEGNMHLRDEDLNDFDTAKAQ-D 1089

Query: 558  SDEETLLALKRRSKKRETGTAFNDRETGTGFANRKIEMTASEDDGDEEVLSSIFQE 391
            SD+ETLL+L++RSKK       N R        + IE    +   D+E LSS+ ++
Sbjct: 1090 SDDETLLSLRKRSKKE------NHRLLREEVPEQNIEGKLMQ-SSDDETLSSVLKK 1138



 Score = 38.9 bits (89), Expect(2) = 2e-14
 Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
 Frame = -2

Query: 385  RRLSSKSQDEKHTTSS----IDDTINEDHGHNTEREQNHNNMSSL----LRKDVKKGFAA 230
            RRL  K  +++ +TS+    IDD        +  +   H     L    +  DV   F  
Sbjct: 1140 RRLPPKLDEKRTSTSNGRLGIDDPSGSVVAKDVTKRDGHTLSDELEVAGIEDDV--AFKH 1197

Query: 229  MDVDENTDQ------TRSPTGDDLLNNVDHSMLHHQLHDELADSDDDVG----PAVSKSN 80
            + +D+N++       +    G    NN D S  H Q+ DELADS DD+     P  S S 
Sbjct: 1198 VSLDDNSEDEIMAFSSEKQLGAASANNRDISP-HQQVADELADSGDDIASSALPINSTSR 1256

Query: 79   VKRRKIVIDNDDE 41
             K R ++   DDE
Sbjct: 1257 RKLRMVIDFEDDE 1269


>ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago truncatula]
            gi|355481207|gb|AES62410.1| Topoisomerase 1-associated
            factor [Medicago truncatula]
          Length = 1335

 Score = 70.9 bits (172), Expect(2) = 2e-13
 Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
 Frame = -3

Query: 732  KCSHMIATTLDTNNTFSAAQVTRKLKQLGL-IKKRPVESKTLLRDEADNDNSTVDEQEES 556
            +CS+MIA  LD +  F+ AQV+RKLKQLGL + ++    K   + E   D S  D   ES
Sbjct: 1066 RCSYMIANALDKDGKFTPAQVSRKLKQLGLCVPQKSFRGKNHQKGEDLMDGSN-DRMHES 1124

Query: 555  DEETLLALKRRSKKRETGTAFNDRETGTGFANRKIEMTASEDDGDEEVLSSIFQE 391
            DE+TL++L +R K +      N +E+      +  E   S+DD D+E+L+SI ++
Sbjct: 1125 DEDTLISLVKRKKGK------NRKESSEQLREQTNEDKLSKDDSDDEMLASILKK 1173



 Score = 30.4 bits (67), Expect(2) = 2e-13
 Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
 Frame = -2

Query: 379  LSSKSQDEKHTTSSIDDTINEDHGHNTEREQNHNNMSSLLRKDVKKGFAAMDVDENTDQ- 203
            L  K ++ K +   + +   ED     + ++    + S+L+K      ++  + E+T++ 
Sbjct: 1208 LKKKVKNRKESRKQLQEQTGEDKLSKDDLDEEI--LGSILKKKRNGSVSSDYLHESTNED 1265

Query: 202  --TRSPTGDDLLNNV----------DHSMLHHQLHDELADSDDDVGPAVSKSN-VKRRKI 62
              +R  + D++L +            H + + Q+  +L DS+D+V       N V RRK+
Sbjct: 1266 ELSRDDSEDEMLQSAPNENQGGFVNSHQVENMQVDPDLEDSEDEVAVDTLPDNAVSRRKL 1325

Query: 61   --VIDNDDE 41
              V+D +D+
Sbjct: 1326 RMVVDLEDD 1334


>ref|XP_002331831.1| predicted protein [Populus trichocarpa] gi|222875069|gb|EEF12200.1|
            predicted protein [Populus trichocarpa]
          Length = 1341

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 47/113 (41%), Positives = 71/113 (62%)
 Frame = -3

Query: 732  KCSHMIATTLDTNNTFSAAQVTRKLKQLGLIKKRPVESKTLLRDEADNDNSTVDEQEESD 553
            +CS+MIA  + ++N+F+AAQV+RKLKQLGL   R  +S+T +    +  NS     ++SD
Sbjct: 1067 RCSYMIANAMGSDNSFTAAQVSRKLKQLGLRAPRQKQSETDMHLRDEELNSFSVGGQDSD 1126

Query: 552  EETLLALKRRSKKRETGTAFNDRETGTGFANRKIEMTASEDDGDEEVLSSIFQ 394
            +ETLL+LK RSK ++ G  F D        ++ IE  +S  D D+E+L SI +
Sbjct: 1127 DETLLSLKNRSKNKDDGGLFGDE-----LPSQNIEGESS--DSDDELLCSILK 1172


>ref|XP_002865941.1| hypothetical protein ARALYDRAFT_331651 [Arabidopsis lyrata subsp.
            lyrata] gi|297311776|gb|EFH42200.1| hypothetical protein
            ARALYDRAFT_331651 [Arabidopsis lyrata subsp. lyrata]
          Length = 1145

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
 Frame = -3

Query: 732  KCSHMIATTLDTNNTFSAAQVTRKLKQLGLIKKRPVESKTLLRDEADNDNSTVDEQEESD 553
            +C ++IA  L + NT+++ QV+RKLKQLGL   R  +S+  +  + D+D+S+ D   +SD
Sbjct: 951  RCCYLIANELGSENTYTSTQVSRKLKQLGLRLPRGKKSEAGMMLKDDHDDSSAD---KSD 1007

Query: 552  EETLLALKRRSKKR------------ETGTAFNDRETGTGFANRKIEMTASEDDGDEEVL 409
            +ETLLA K R  ++            E     ++  T     ++ +  T  E+D D+  +
Sbjct: 1008 DETLLAFKNRKSRKNQKNKQHTRSSNEITPGDSEHYTERNETSQHVPTTGEEEDNDQNYI 1067

Query: 408  SSIFQEVLGDFHRSHRMRST 349
            +   +E   D H S+   ST
Sbjct: 1068 TRESRESETDVHISNNAPST 1087


>emb|CBI22579.3| unnamed protein product [Vitis vinifera]
          Length = 1217

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = -3

Query: 732  KCSHMIATTLDTNNTFSAAQVTRKLKQLGL--IKKRPVESKTLLRDEADNDNSTVDEQEE 559
            +C++MIA+ L  ++  +AAQV+RKLKQLGL   +++  E    LRDE  ND  T   Q +
Sbjct: 1040 RCTYMIASALAGDDILTAAQVSRKLKQLGLHVPRRKRAEGNMHLRDEDLNDFDTAKAQ-D 1098

Query: 558  SDEETLLALKRRSKKRETGTAFNDRETGTGFANRKIEMTASEDDGDEEVLSSIFQE 391
            SD+ETLL+L++RSKK       N R        + IE    +   D+E LSS+ ++
Sbjct: 1099 SDDETLLSLRKRSKKE------NHRLLREEVPEQNIEGKLMQ-SSDDETLSSVLKK 1147


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