BLASTX nr result
ID: Papaver22_contig00035403
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00035403
(921 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 414 e-113
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 414 e-113
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 397 e-108
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 377 e-102
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab... 376 e-102
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 414 bits (1064), Expect = e-113
Identities = 204/306 (66%), Positives = 247/306 (80%)
Frame = +2
Query: 2 LFYNGVAAKGTLLVNKKLDFKTIQIRPSMIKVESDPKLVNAVSANSLEIVTTSNKPKNSC 181
LF NG A KGTLL+N+KL +TIQIRPSMIKVE+DPKL + + NS+EI TSN+P+ S
Sbjct: 395 LFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSY 454
Query: 182 LSKYLLALLAYGGVPPEYFMNLLTKALEDAQNVHYNKHAALTVALRYGEMDNFLVPRMIL 361
LSKYL+ALL+YGGVP EYFMNLL ALEDA +V +K AAL V+LR+GEMD+ +V RMIL
Sbjct: 455 LSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMIL 514
Query: 362 SGIPIDEPYLEDRLRVLMNEEKKSLMGGKLPISECYYLMGTVDPTGILNRDEVCVILEDG 541
SGIPIDEP+L L ++NEE+K L GKLP+++C+YLMGT DPTG L DEVC+IL+ G
Sbjct: 515 SGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHG 574
Query: 542 QLSGNVLVYKNPGLHFGDVHVMKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDF 721
Q+ G VLVYK+PGLHFGD+HV+ ATYVE L FVGNAKYAIFFP KGPRS+ADE+ANSDF
Sbjct: 575 QVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDF 634
Query: 722 DGDMYWVSRNPQLLESFRPSSPWEQKYTAKSVRNRKPTDFSLGELEDELFQQFLTTRFNP 901
DGDMYWVSRN QLL+ FR S PW +K + + V +++PTDFS ELE ELFQ FLTTRF
Sbjct: 635 DGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQT 694
Query: 902 SYSMGV 919
S ++G+
Sbjct: 695 SSAIGM 700
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 414 bits (1064), Expect = e-113
Identities = 204/306 (66%), Positives = 247/306 (80%)
Frame = +2
Query: 2 LFYNGVAAKGTLLVNKKLDFKTIQIRPSMIKVESDPKLVNAVSANSLEIVTTSNKPKNSC 181
LF NG A KGTLL+N+KL +TIQIRPSMIKVE+DPKL + + NS+EI TSN+P+ S
Sbjct: 409 LFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSY 468
Query: 182 LSKYLLALLAYGGVPPEYFMNLLTKALEDAQNVHYNKHAALTVALRYGEMDNFLVPRMIL 361
LSKYL+ALL+YGGVP EYFMNLL ALEDA +V +K AAL V+LR+GEMD+ +V RMIL
Sbjct: 469 LSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDSIVTRMIL 528
Query: 362 SGIPIDEPYLEDRLRVLMNEEKKSLMGGKLPISECYYLMGTVDPTGILNRDEVCVILEDG 541
SGIPIDEP+L L ++NEE+K L GKLP+++C+YLMGT DPTG L DEVC+IL+ G
Sbjct: 529 SGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHG 588
Query: 542 QLSGNVLVYKNPGLHFGDVHVMKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDF 721
Q+ G VLVYK+PGLHFGD+HV+ ATYVE L FVGNAKYAIFFP KGPRS+ADE+ANSDF
Sbjct: 589 QVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDF 648
Query: 722 DGDMYWVSRNPQLLESFRPSSPWEQKYTAKSVRNRKPTDFSLGELEDELFQQFLTTRFNP 901
DGDMYWVSRN QLL+ FR S PW +K + + V +++PTDFS ELE ELFQ FLTTRF
Sbjct: 649 DGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQT 708
Query: 902 SYSMGV 919
S ++G+
Sbjct: 709 SSAIGM 714
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 397 bits (1021), Expect = e-108
Identities = 200/306 (65%), Positives = 237/306 (77%)
Frame = +2
Query: 2 LFYNGVAAKGTLLVNKKLDFKTIQIRPSMIKVESDPKLVNAVSANSLEIVTTSNKPKNSC 181
LFYNG+A KGT L+NK+L +TIQIR SMIKVE DP L N + NSLE+V TSN PK +
Sbjct: 523 LFYNGLAVKGTFLLNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTF 582
Query: 182 LSKYLLALLAYGGVPPEYFMNLLTKALEDAQNVHYNKHAALTVALRYGEMDNFLVPRMIL 361
LS+ L+ALL YGGVP EYFMN+L AL+D Q V +K AAL V++ GEMD+FLV RMIL
Sbjct: 583 LSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDFLVARMIL 642
Query: 362 SGIPIDEPYLEDRLRVLMNEEKKSLMGGKLPISECYYLMGTVDPTGILNRDEVCVILEDG 541
+GIP+DE YL+ RL VL+ EEKKSL G+L + ECYYLMGTVDPT L EVCVIL +G
Sbjct: 643 AGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVILYNG 702
Query: 542 QLSGNVLVYKNPGLHFGDVHVMKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDF 721
Q++G VLVY+NPGLHFGD+HV+ A YVE+LV VGNAKYAIFF +KGPRSVADEIA DF
Sbjct: 703 QINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADEIAGGDF 762
Query: 722 DGDMYWVSRNPQLLESFRPSSPWEQKYTAKSVRNRKPTDFSLGELEDELFQQFLTTRFNP 901
DGDMYWVSRN QLLE FRP PW + + V N+KP +FS ELE+ELF+ FL+TRF P
Sbjct: 763 DGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRFQP 822
Query: 902 SYSMGV 919
SY+ V
Sbjct: 823 SYAKSV 828
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 377 bits (968), Expect = e-102
Identities = 180/307 (58%), Positives = 235/307 (76%), Gaps = 1/307 (0%)
Frame = +2
Query: 2 LFYNGVAAKGTLLVNKKLDFKTIQIRPSMIKVESDPKLVNAVSANSLEIVTTSNKPKNSC 181
+FY+G A KGT L+NKKL +T+Q+RPSMIKV DP L N + N+LE+VTTSN P+ +
Sbjct: 448 MFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPRRTK 507
Query: 182 LSKYLLALLAYGGVPPEYFMNLLTKALEDAQNVHYNKHAALTVALRYGEMDNFLVPRMIL 361
LSK L+ALL+YGG+P E+F+++L LE+++++ YNKHAAL VAL YGEMD+ +MIL
Sbjct: 508 LSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGEMDDQNAAQMIL 567
Query: 362 SGIPIDEPYLEDRLRVLMNEEKKSLMGGKLPISECYYLMGTVDPTGILNRDEVCVILEDG 541
GIP+DEP+L++ L +L+ EK L G+LP++E YYLMGTVDPTG L DEVCVILE G
Sbjct: 568 VGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTGELKEDEVCVILESG 627
Query: 542 QLSGNVLVYKNPGLHFGDVHVMKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDF 721
Q+SG VLVY+NPGLHFGD+H++KATYV+ L +VGN+KYA+FFP KGPRS+ DEIA DF
Sbjct: 628 QISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAGGDF 687
Query: 722 DGDMYWVSRNPQLLESFRPSSPW-EQKYTAKSVRNRKPTDFSLGELEDELFQQFLTTRFN 898
DGDMY++SRNP+LLE F+PS PW +KS R P+ S ELE+ELF+ FL F+
Sbjct: 688 DGDMYFISRNPELLEHFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLKAGFH 747
Query: 899 PSYSMGV 919
S +G+
Sbjct: 748 ASNVIGI 754
>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
polymerase-like protein [Arabidopsis thaliana]
Length = 977
Score = 376 bits (966), Expect = e-102
Identities = 180/307 (58%), Positives = 235/307 (76%), Gaps = 1/307 (0%)
Frame = +2
Query: 2 LFYNGVAAKGTLLVNKKLDFKTIQIRPSMIKVESDPKLVNAVSANSLEIVTTSNKPKNSC 181
+FY+G A KGT L+NKKL +T+Q+RPSMIKV DP L N + N+LE+VTTSN PK +
Sbjct: 444 MFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTK 503
Query: 182 LSKYLLALLAYGGVPPEYFMNLLTKALEDAQNVHYNKHAALTVALRYGEMDNFLVPRMIL 361
LSK L+ALL+YGG+P E+F+++L LE+++++ YNK AAL AL YGEMD+ +MIL
Sbjct: 504 LSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAAQMIL 563
Query: 362 SGIPIDEPYLEDRLRVLMNEEKKSLMGGKLPISECYYLMGTVDPTGILNRDEVCVILEDG 541
GIP+DEP+L++ L +L+ EK L GKLP++E YYLMGTVDPTG L DEVCVILE G
Sbjct: 564 VGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTESYYLMGTVDPTGALKEDEVCVILESG 623
Query: 542 QLSGNVLVYKNPGLHFGDVHVMKATYVEELVNFVGNAKYAIFFPTKGPRSVADEIANSDF 721
Q+SG VLVY+NPGLHFGD+H++KATYV+ L +VGN+K+A+FFP KGPRS+ DEIA DF
Sbjct: 624 QISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDF 683
Query: 722 DGDMYWVSRNPQLLESFRPSSPW-EQKYTAKSVRNRKPTDFSLGELEDELFQQFLTTRFN 898
DGDMY++SRNP+LLE+F+PS PW +KS R P+ S ELE+ELF+ FLT F+
Sbjct: 684 DGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFH 743
Query: 899 PSYSMGV 919
S +G+
Sbjct: 744 ASNVIGI 750