BLASTX nr result

ID: Papaver22_contig00035275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00035275
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   157   2e-36
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...   152   5e-35
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...   130   1e-28
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...   130   1e-28
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...   128   7e-28

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score =  157 bits (396), Expect = 2e-36
 Identities = 82/144 (56%), Positives = 107/144 (74%), Gaps = 5/144 (3%)
 Frame = +3

Query: 195 MSVKLTQNAISSIHGGDTNIKPLVQVLDIKSAGKSQDRLRLLVSDSVSTQYVVLASQLNE 374
           M V LT NAI++I+GGD N KPLVQVLDIK  G SQ+R R L+SD+V+TQ  +LA+QLN+
Sbjct: 1   MPVNLTPNAIAAINGGDVNSKPLVQVLDIKLIGNSQERYRFLLSDAVATQQAMLATQLND 60

Query: 375 KVFNGEIRKGSVVQLIDYLCNTVQTRKIILILNMETIIPECAIIGNPKVTNEPQS-APSD 551
           +V +G++RKGSV+QLIDY+C+ VQ RKII++LNMETIIPEC IIGNPK+  E  S A  +
Sbjct: 61  RVKSGQVRKGSVIQLIDYICSVVQNRKIIVVLNMETIIPECEIIGNPKMNTESHSTAQKE 120

Query: 552 NNGGYQPR----IPSNMSAPTGNS 611
             GG + R      +N+S   G +
Sbjct: 121 FPGGNRARSVGVTNNNLSVQNGGN 144


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score =  152 bits (384), Expect = 5e-35
 Identities = 79/140 (56%), Positives = 102/140 (72%)
 Frame = +3

Query: 195 MSVKLTQNAISSIHGGDTNIKPLVQVLDIKSAGKSQDRLRLLVSDSVSTQYVVLASQLNE 374
           M V LT NAIS I+GGD N+KPLVQV+DIK  G +Q+R R L+SDSVSTQ+ +LA+QLN+
Sbjct: 1   MPVNLTPNAISMINGGDVNMKPLVQVVDIKQIGSAQERYRFLISDSVSTQHAMLATQLND 60

Query: 375 KVFNGEIRKGSVVQLIDYLCNTVQTRKIILILNMETIIPECAIIGNPKVTNEPQSAPSDN 554
           +V +G ++KGSVVQLIDY+C+ VQ RKII++LN+ETIIPEC IIGN K   +  +  +  
Sbjct: 61  RVKHGFVKKGSVVQLIDYICSEVQNRKIIVVLNLETIIPECEIIGNAKTLTDMFAQKASQ 120

Query: 555 NGGYQPRIPSNMSAPTGNSN 614
           NG       S  SA  G +N
Sbjct: 121 NGN------SVQSAGVGYNN 134


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 623

 Score =  130 bits (328), Expect = 1e-28
 Identities = 68/120 (56%), Positives = 89/120 (74%)
 Frame = +3

Query: 195 MSVKLTQNAISSIHGGDTNIKPLVQVLDIKSAGKSQDRLRLLVSDSVSTQYVVLASQLNE 374
           M V LT NAIS+I  GD N KPLVQVLDIK  G +Q+R  LL+SD+VS +  +LA+QLN+
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 375 KVFNGEIRKGSVVQLIDYLCNTVQTRKIILILNMETIIPECAIIGNPKVTNEPQSAPSDN 554
            V  G ++KGSV+QLIDY+C+ ++ RKII++L +ETII +C IIGNPK      SA S+N
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPK-----SSAQSEN 115


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 694

 Score =  130 bits (328), Expect = 1e-28
 Identities = 68/120 (56%), Positives = 89/120 (74%)
 Frame = +3

Query: 195 MSVKLTQNAISSIHGGDTNIKPLVQVLDIKSAGKSQDRLRLLVSDSVSTQYVVLASQLNE 374
           M V LT NAIS+I  GD N KPLVQVLDIK  G +Q+R  LL+SD+VS +  +LA+QLN+
Sbjct: 1   MPVHLTPNAISAIVAGDVNSKPLVQVLDIKLIGNAQERYSLLISDAVSAEQAMLATQLND 60

Query: 375 KVFNGEIRKGSVVQLIDYLCNTVQTRKIILILNMETIIPECAIIGNPKVTNEPQSAPSDN 554
            V  G ++KGSV+QLIDY+C+ ++ RKII++L +ETII +C IIGNPK      SA S+N
Sbjct: 61  VVKTGRVKKGSVIQLIDYVCSPIKNRKIIVVLCLETIILDCEIIGNPK-----SSAQSEN 115


>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score =  128 bits (322), Expect = 7e-28
 Identities = 62/116 (53%), Positives = 88/116 (75%), Gaps = 4/116 (3%)
 Frame = +3

Query: 195 MSVKLTQNAISSIHGGDTNIKPLVQVLDIKSAGKSQDR----LRLLVSDSVSTQYVVLAS 362
           M V LT NAI++I+ GD N+KPL+QVL+IK  G+SQ+R     R L+SD VS Q+ ++A 
Sbjct: 1   MPVSLTPNAITAINDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAV 60

Query: 363 QLNEKVFNGEIRKGSVVQLIDYLCNTVQTRKIILILNMETIIPECAIIGNPKVTNE 530
           QLN++V +G++ KGS+VQLIDY+C+ V+ RK+I++LNMETI+P    IGNP +  E
Sbjct: 61  QLNDRVKSGQVEKGSIVQLIDYICSDVKGRKLIVVLNMETIVPHSETIGNPTIFGE 116


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