BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00035190
         (1362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    87   1e-14
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    86   2e-14
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               83   2e-13
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    82   3e-13
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    81   6e-13

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 45/140 (32%), Positives = 69/140 (49%)
 Frame = -1

Query: 420 IIAWNCNGFADKETRNYASDLNKMINPDIFFLQETKICSDKIIRFTKPLNFPNIFYVPSV 241
           +I+WNC G  +  T  Y  ++ K   PDI FL ETK   D + +    L +  I  V   
Sbjct: 2   VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPE 61

Query: 240 GRARGICLLWKDGFKLDIIYHDKNMINCLVTSNPSKPTWLLSCVYGSPYPQESKVQWDFI 61
           GR+ G+ + WK   +++ +Y DKN+++  V+S      W +SCVYG P        W+ +
Sbjct: 62  GRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSR--NKVWFISCVYGLPVTHMRPKLWEHL 119

Query: 60  KNVCENFHINAPWALIGDLN 1
            ++         W LIGD N
Sbjct: 120 NSI--GLKRAEAWCLIGDFN 137


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1750

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 46/120 (38%), Positives = 66/120 (55%)
 Frame = -1

Query: 360 LNKMINPDIFFLQETKICSDKIIRFTKPLNFPNIFYVPSVGRARGICLLWKDGFKLDIIY 181
           L +M N DI FL ET    DK+ +    L FPN+   P  GR+ G+ L+WK+   L +I 
Sbjct: 404 LFRMYNYDILFLVETLNQCDKVCKLAYDLGFPNVITQPPNGRSGGLALMWKNNVSLSLIS 463

Query: 180 HDKNMINCLVTSNPSKPTWLLSCVYGSPYPQESKVQWDFIKNVCENFHINAPWALIGDLN 1
            D+ +I+  VT N    ++ LSCVYG P   E    W  ++++ +N   NA W L+GD N
Sbjct: 464 QDERLIDSHVTFN--NKSFYLSCVYGHPTQSERHQLWQTLEHISDN--RNAEWLLVGDFN 519


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 43/139 (30%), Positives = 70/139 (50%)
 Frame = -1

Query: 417 IAWNCNGFADKETRNYASDLNKMINPDIFFLQETKICSDKIIRFTKPLNFPNIFYVPSVG 238
           + WNC G     T     ++N+   PD+  L ETK  +D +      L F N   VPS+G
Sbjct: 57  LCWNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMG 116

Query: 237 RARGICLLWKDGFKLDIIYHDKNMINCLVTSNPSKPTWLLSCVYGSPYPQESKVQWDFIK 58
            + G+ +LWK    + + ++  N+++C V SN  +  + LS VYG P P      W+ ++
Sbjct: 117 LSGGLVVLWKPSVHISVSFNSPNLVDCYVQSN--EVGFNLSFVYGHPNPSHRNNLWERLE 174

Query: 57  NVCENFHINAPWALIGDLN 1
            +  N +   PW ++GD N
Sbjct: 175 RLAVNRN-GQPWFILGDFN 192


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
 Frame = -1

Query: 426 MRIIAWNCNGFADKETRNYASDLNKMIN--PDIFFLQETKICSDKIIRFTKPLNFPNIFY 253
           M +++WNC G    +       +   ++  P++ FL ETK CS+ ++   + L +  +F 
Sbjct: 1   MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETKNCSNVVVDLQEWLGYERVFT 60

Query: 252 VPSVGRARGICLLWKDGFKLDIIYHDKNMINCLVTSNPSKPTWLLSCVYGSPYPQESKVQ 73
           V  +G + G+ L WK G  + I Y DKN+I+  +     +  + +SCVYG+P   +  + 
Sbjct: 61  VNPIGLSGGLALFWKKGVDIVIKYADKNLIDFQIQFGSHE--FYVSCVYGNPAFSDKHLV 118

Query: 72  WDFIKNVCENFHINAPWALIGDLN 1
           W+ I  +    +   PW ++GD N
Sbjct: 119 WEKITRI--GINRKEPWCMLGDFN 140


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 81.3 bits (199), Expect = 6e-13
 Identities = 40/142 (28%), Positives = 73/142 (51%)
 Frame = -1

Query: 426 MRIIAWNCNGFADKETRNYASDLNKMINPDIFFLQETKICSDKIIRFTKPLNFPNIFYVP 247
           MRI++WNC G  +  T  +  ++  +  P++ FL ETK   + +      L F ++  V 
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 246 SVGRARGICLLWKDGFKLDIIYHDKNMINCLVTSNPSKPTWLLSCVYGSPYPQESKVQWD 67
            +G++ G+ L+WKD  ++ ++  DK +I+ L+     +  + L+C+YG P   E    W+
Sbjct: 61  PIGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKE--FYLTCIYGEPVQAERGELWE 118

Query: 66  FIKNVCENFHINAPWALIGDLN 1
            +  +      + PW L GD N
Sbjct: 119 RLTRL--GLSRSGPWMLTGDFN 138