BLASTX nr result

ID: Papaver22_contig00035128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00035128
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468698.1| hypothetical protein SORBIDRAFT_01g050460 [S...    58   3e-13
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...    60   5e-12
ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...    61   8e-12
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...    59   1e-11
ref|XP_003574322.1| PREDICTED: CCR4-NOT transcription complex su...    53   5e-11

>ref|XP_002468698.1| hypothetical protein SORBIDRAFT_01g050460 [Sorghum bicolor]
            gi|241922552|gb|EER95696.1| hypothetical protein
            SORBIDRAFT_01g050460 [Sorghum bicolor]
          Length = 2371

 Score = 58.2 bits (139), Expect(2) = 3e-13
 Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
 Frame = +1

Query: 91   LKALMIYSDGEHNSN-----KAIHSELLNLAEYNVHVAKLVNAGQNRTATRVCNPLLQIL 255
            L + +IYSD E   N       I SELLNL EYNVH+AKL++ G+N+ AT     L+Q L
Sbjct: 1689 LTSWVIYSDEEKKFNIEIIFGLIRSELLNLGEYNVHLAKLIDGGRNKVATEFAMSLVQTL 1748

Query: 256  VTPDAELVS 282
            +T D+  VS
Sbjct: 1749 ITQDSVGVS 1757



 Score = 42.7 bits (99), Expect(2) = 3e-13
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = +3

Query: 273  IGVSELYNLMEPLAKLRTRPRSSESSPQLLWIASATAPSPPGYKGTLEEK 422
            +GVSELYN++E L+KL  RP S ES  QL+ IA     +  G+    +EK
Sbjct: 1754 VGVSELYNVVEALSKLARRPGSPESLQQLIEIARNNVSTTTGFVVGKDEK 1803


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score = 60.5 bits (145), Expect(2) = 5e-12
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
 Frame = +1

Query: 91   LKALMIYSDGEHNSNKAI-----HSELLNLAEYNVHVAKLVNAGQNRTATRVCNPLLQIL 255
            L + +IYSD E   NK I      SELLNLAEYNVH+AKL++ G+N+ AT     L+Q L
Sbjct: 1687 LTSWVIYSDEERKFNKDITLGLMRSELLNLAEYNVHMAKLIDGGRNKVATDFAVSLIQAL 1746

Query: 256  VTPDAELVS 282
            +  ++ ++S
Sbjct: 1747 IVEESSVIS 1755



 Score = 36.6 bits (83), Expect(2) = 5e-12
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +3

Query: 279  VSELYNLMEPLAKLRTRPRSSESSPQLLWIA 371
            +SEL+NL++ LAKL  +P SSES  QL+ IA
Sbjct: 1754 ISELHNLVDALAKLAAKPGSSESLQQLIEIA 1784


>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score = 61.2 bits (147), Expect(2) = 8e-12
 Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
 Frame = +1

Query: 91   LKALMIYSDGEHNSNK-----AIHSELLNLAEYNVHVAKLVNAGQNRTATRVCNPLLQIL 255
            L + +IYSD E   NK      I SELLNLAEYNVH+AKL++ G+N+ AT     L+Q L
Sbjct: 1672 LTSWVIYSDEERKFNKDITVGLIRSELLNLAEYNVHMAKLIDGGRNKGATEFSISLIQAL 1731

Query: 256  VTPDAELVS 282
            V  +++++S
Sbjct: 1732 VVEESKVIS 1740



 Score = 35.0 bits (79), Expect(2) = 8e-12
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +3

Query: 279  VSELYNLMEPLAKLRTRPRSSESSPQLLWI 368
            +SEL+NL++ LAKL  +P SSES  QL+ I
Sbjct: 1739 ISELHNLVDALAKLAAKPGSSESLQQLIEI 1768


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score = 58.9 bits (141), Expect(2) = 1e-11
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
 Frame = +1

Query: 91   LKALMIYSDGEHNSNKAI-----HSELLNLAEYNVHVAKLVNAGQNRTATRVCNPLLQIL 255
            L + +IYS+ E   NK I      SELLNL EYNVH+AKL++ G+N+ AT     LLQ L
Sbjct: 1744 LTSWVIYSEEERKYNKEITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTL 1803

Query: 256  VTPDAELVS 282
            V  + +++S
Sbjct: 1804 VVEEPKVIS 1812



 Score = 36.6 bits (83), Expect(2) = 1e-11
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +3

Query: 279  VSELYNLMEPLAKLRTRPRSSESSPQLL 362
            +SEL+NL++ LAKL T+P   ES PQLL
Sbjct: 1811 ISELHNLVDALAKLATKPGCPESLPQLL 1838


>ref|XP_003574322.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like
            [Brachypodium distachyon]
          Length = 2399

 Score = 53.1 bits (126), Expect(2) = 5e-11
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
 Frame = +1

Query: 103  MIYSDGEHNSNK-----AIHSELLNLAEYNVHVAKLVNAGQNRTATRVCNPLLQILVTPD 267
            +IYSD E   N       I SE+LNL +YNVH+AK++++G+NR AT     L+Q L+T +
Sbjct: 1721 VIYSDEEKKFNLDIITGLIRSEILNLGDYNVHLAKIIDSGRNRAATEFAISLVQRLITQE 1780

Query: 268  AELVS 282
               VS
Sbjct: 1781 PTGVS 1785



 Score = 40.4 bits (93), Expect(2) = 5e-11
 Identities = 22/57 (38%), Positives = 32/57 (56%)
 Frame = +3

Query: 276  GVSELYNLMEPLAKLRTRPRSSESSPQLLWIASATAPSPPGYKGTLEEKYEQLLTQE 446
            GVSE YN+++ L+KL  RP S ES  QL+ IA +   +   +    +EK  Q   Q+
Sbjct: 1783 GVSEFYNVVDALSKLAVRPSSPESLQQLVEIARSNFNNAASFLAMKDEKVRQSRDQK 1839


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