BLASTX nr result

ID: Papaver22_contig00035125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00035125
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    89   4e-16
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    88   8e-16
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    85   6e-15
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   1e-14
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    84   2e-14

>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
 Frame = +3

Query: 6   GNINQQVDKLQSELEVLQNQTPGEVVHNDILKVNADLSKWHKRRADFYQQKSRFTFYKEH 185
           GNI +Q+ +++S+L  LQ Q          L +   L + H ++   +  +SR    ++ 
Sbjct: 291 GNIGKQLGRVESDLCRLQQQPISSANCEARLTLEKKLDELHAKQEARWYLRSRAMEVRDG 350

Query: 186 DNNTKFFHAKINRKKARNNIDAIKDHEGNWIWNREDIAAHLTDHFRKISTSSNPS---LE 356
           D NTK+FH K +++K RN +  + D  G W    +DI    TD+F  I TS+NPS   L 
Sbjct: 351 DRNTKYFHHKASQRKKRNFVKGLFDASGTWCEEVDDIECVFTDYFTSIFTSTNPSDVQLN 410

Query: 357 ERLYLVLPTVITSEDNVNLCKIPELQEIHSAL-----------EGFQAGFYKSQWEVVGT 503
           + L  V P V+T E N  L K    +E++ AL           +G  A FY+  W ++G 
Sbjct: 411 DVLCCVDP-VVTEECNTWLLKPFSKEELYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGD 469

Query: 504 DICKMV 521
           D+ + V
Sbjct: 470 DVTQFV 475


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 88.2 bits (217), Expect = 8e-16
 Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
 Frame = +3

Query: 3   FGNINQQVDKLQSELEVLQNQTPGEVVHNDILKVNADLSKWHKRRADFYQQKSRFTFYKE 182
           F N+++Q++  +  L V QN    E    + + +   L + H +   ++  +SR    K+
Sbjct: 290 FKNLSKQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLRSRVAEVKD 349

Query: 183 HDNNTKFFHAKINRKKARNNIDAIKDHEGNWIWNREDIAAHLTDHFRKISTSSNPS--LE 356
            D NTK+FH K +++K RN +  + D  G W    + I    T +F  I TSSNPS    
Sbjct: 350 GDKNTKYFHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPSDLSL 409

Query: 357 ERLYLVLPTVITSEDNVNLCKIPELQEIHSAL-----------EGFQAGFYKSQWEVVGT 503
           E +  V+  V+T E N+ L +     EI +AL           +G    FY+  W +VG 
Sbjct: 410 EAVMSVIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDGMHVIFYQRFWHIVGD 469

Query: 504 DICKMV 521
           D+   +
Sbjct: 470 DVTSFI 475


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
 Frame = +3

Query: 3   FGNINQQVDKLQSELEVLQ-----NQTPGEVVHNDILKVNADLSKWHKRRADFYQQKSRF 167
           FGNI Q+ DKL  E++ +Q     NQT   +   D+L    ++    +    F  QKSR 
Sbjct: 258 FGNIQQRKDKLVQEIQAVQDFLEHNQTDDLLNKEDVLIKEFEVVLEQEEIVWF--QKSRE 315

Query: 168 TFYKEHDNNTKFFHAKINRKKARNNIDAIKDHEGNWIWNREDIAAHLTDHFRKI-STSSN 344
            +    D NTK+FH     ++ RN I+ +KD EG W+   E++A    ++++K+ S    
Sbjct: 316 KWIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKWVEEPEELAKMAVEYYQKLYSVEDV 375

Query: 345 PSLEERLYLVLPTVITSEDNVNLCKIPELQEIHSAL-----------EGFQAGFYKSQWE 491
            S+ ERL     T +T E+  +L K     ++ +++           +G+Q  FY+  WE
Sbjct: 376 DSIVERLPSAGFTCLTREEISDLSKPFMSIDVENSMRGMGRFKAPGPDGYQPVFYQDCWE 435

Query: 492 VVGTDICKMVWKFFQS 539
           VVG  +   V  FF++
Sbjct: 436 VVGQSVTNFVLNFFET 451


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
 Frame = +3

Query: 3   FGNINQQVDKLQSELEVLQNQTPGEVVHNDILKVNADLSKWHKRRADFYQQKSRFTFYKE 182
           FG++ +++   Q +++VL    P E     +  ++A + +  KR   ++ Q+SR  + K 
Sbjct: 297 FGHVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELEKREEVYWHQRSRQDWIKS 356

Query: 183 HDNNTKFFHAKINRKKARNNIDAIKDHEGNWIWNREDIAAHLTDHFRKISTSSNPSLEER 362
            D NTKFFH K + ++ RNN+  I++  G W  + +D+      +F  +  S N    + 
Sbjct: 357 GDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCEMDP 416

Query: 363 LYLVLPTVITSEDNVNLCKIPELQEIHSAL-----------EGFQAGFYKSQWEVVGTDI 509
           +  ++   IT E    L      +E+ +AL           +G  A FY+  W+ +G D+
Sbjct: 417 ILNIVKPQITDELGTQLDAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDV 476

Query: 510 CKMV 521
              V
Sbjct: 477 TTKV 480


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/181 (26%), Positives = 96/181 (53%), Gaps = 13/181 (7%)
 Frame = +3

Query: 6    GNINQQVDKLQSELEVLQNQ--TPGEVVHNDILKVNADLSKWHKRRADFYQQKSRFTFYK 179
            G++ ++V K++ ELE  + Q  +  +VV  ++L+    L K  ++   +++Q++   +  
Sbjct: 545  GDLEKRVKKVKKELETCRRQPISRDQVVREEVLRYR--LEKLEQQVDIYWKQRAHTNWLN 602

Query: 180  EHDNNTKFFHAKINRKKARNNIDAIKDHEGNWIWNREDIAAHLTDHFRKISTSSNPSLEE 359
            + D NT FFHA  + ++ RN I+ ++  +G+W+   ED  A + + F+++ TS+     +
Sbjct: 603  KGDRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQ 662

Query: 360  RLYLVLPTVITSEDNVNLCKIPELQEIHSAL-----------EGFQAGFYKSQWEVVGTD 506
            +L  V+   ++   N +L      +E+  AL           +G  AGFYK+ W+VVG  
Sbjct: 663  KLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEK 722

Query: 507  I 509
            +
Sbjct: 723  V 723


Top