BLASTX nr result

ID: Papaver22_contig00035016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00035016
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]    72   2e-10
ref|NP_195598.1| putative F-box protein [Arabidopsis thaliana] g...    65   1e-08
emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]    64   6e-08
ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07

>emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]
          Length = 862

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
 Frame = -2

Query: 639  VNGLICFVNRRLAA-------VRILNPSTRESTPWIASSLRQNKKYNFIADYSCGIWLPT 481
            VNGLIC   +   +       V + NPSTRE    +  +   N    F   +        
Sbjct: 568  VNGLICLYEQHDRSFPKLSFRVTLCNPSTRERVT-LPPTRFSNPDLCFDHQHIS------ 620

Query: 480  YFLGFDPATKQHKVLCTWRVRGPVTRNSNVVTIGKDI*WADFCEVLTIGENTWRYIDEKV 301
              LGFDP+TK +K+L  W       R ++++           CE+LT+G   WR I + +
Sbjct: 621  --LGFDPSTKTYKILKVW-----FERFNSIM-----------CEILTLGXRAWRIIKDGL 662

Query: 300  PFSYTVKFSVYANGFIYWGKQS---------IGIPEKLNAFDVGQEKFKVIRVPHE--IR 154
             ++   K  +  NG IYW             + +  ++ AFDVG+EKF+ + VP E  I 
Sbjct: 663  EYTLEAK-GICLNGTIYWADARHISEDYPHFVVMQNRVIAFDVGEEKFRSVPVPPEVPIW 721

Query: 153  DKCENPPGGDTFGPFDSLTDVGGHIAL 73
            DKC             S+  +GGH+A+
Sbjct: 722  DKC-----------MSSIIQIGGHMAI 737


>ref|NP_195598.1| putative F-box protein [Arabidopsis thaliana]
           gi|75266820|sp|Q9T0J4.1|FB249_ARATH RecName:
           Full=Putative F-box protein At4g38870
           gi|4490339|emb|CAB38621.1| putative protein [Arabidopsis
           thaliana] gi|7270870|emb|CAB80550.1| putative protein
           [Arabidopsis thaliana] gi|332661585|gb|AEE86985.1|
           putative F-box protein [Arabidopsis thaliana]
          Length = 426

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 74/269 (27%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
 Frame = -2

Query: 738 LGNLFESGRLQAIR--------TTVTRLEQESFCYTE----ILNPVNGLICFVNRRLAAV 595
           LG++F S  L++ R        ++ + +     CYT+    I   V+GLIC+     +++
Sbjct: 113 LGSIFSSVHLKSTREISSSSSSSSASSITYHVTCYTQQRMTISPSVHGLICYGPP--SSL 170

Query: 594 RILNPSTREST--PWIASSLRQNKKYNFIADYSCGIWLPTYFLGFDPATKQHKVLCTWRV 421
            I NP TR S   P I +  R   +Y                +G+DP    +KV+C  R 
Sbjct: 171 VIYNPCTRRSITLPKIKAGRRAINQY----------------IGYDPLDGNYKVVCITRG 214

Query: 420 RGPVTRNSNVVTIGKDI*WADFCEVLTIG--ENTWRYIDEKVPFSYTVKFSVYANGFIYW 247
             P+ RN   +        A+  +VLT+G  +++WR I + +P    V   +  NG +Y+
Sbjct: 215 M-PMLRNRRGL--------AEEIQVLTLGTRDSSWRMIHDIIPPHSPVSEELCINGVLYY 265

Query: 246 GKQSIGIPEKLN-----AFDVGQEKFKVIRVPHEIRDKCENPPGGDTFGPFDSLTDVGGH 82
            +  IG   KLN     +FDV  EKF +I+VP   R              F  L    G 
Sbjct: 266 -RAFIGT--KLNESAIMSFDVRSEKFDLIKVPCNFRS-------------FSKLAKYEGK 309

Query: 81  IALL--QRWSDKVVKLWICGDDTSTGSYS 1
           +A++  ++ +  ++ LWI  +D S G +S
Sbjct: 310 LAVIFYEKKTSGIIGLWIL-EDASNGEWS 337


>emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]
          Length = 289

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
 Frame = -2

Query: 639 VNGLICFVNRRLAA-------VRILNPSTRESTPWIASSLRQNKKYNFIADYSCGIWLPT 481
           VNGLIC   + + +       V + NPST E      +   +       AD+S       
Sbjct: 108 VNGLICIYEQLVPSSPKLSFRVIVCNPSTGERVTLPPTHFSK-------ADFS--FCHQN 158

Query: 480 YFLGFDPATKQHKVLCTW--RVRGPVTRNSNVVTIGKDI*WADFCEVLTIGENTWRYIDE 307
             LGFDP+TK +K+L  W  R  GP+                   E+ T+G + WR I +
Sbjct: 159 ISLGFDPSTKTYKILRAWWGRYGGPIH------------------EIFTLGSHAWRIIKD 200

Query: 306 KVPFSYTVKFSVYANGFIYW---------GKQSIGIPEKLNAFDVGQEKFKVIRVPHE-- 160
              ++   K  +  NG IYW             + +  ++ AFDVG+EKF+ + VP E  
Sbjct: 201 DPEYALETK-GICLNGTIYWAATFDLSKDNSSFVVMKNRVIAFDVGEEKFRSVPVPPEAP 259

Query: 159 IRDKCENPPGGDTFGPFDSLTDVGGHIAL 73
           I +K ++           ++  +GGH+A+
Sbjct: 260 IWEKYKS-----------NIIQIGGHMAI 277


>ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|222852324|gb|EEE89871.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
 Frame = -2

Query: 660 YTEILNPVNGLICFVNRRLAAVRILNPSTRESTPWIASS---LRQNKKYNFIADYSCGIW 490
           YT +   + G++C   RR   V I N +T+E+     S+   +R +   +F   Y     
Sbjct: 114 YTHLSEIIRGILCINYRRSHRVDICNITTQETITLPRSTNIPIRSDAGVDFDIVYE---- 169

Query: 489 LPTYFLGFDPATKQHKVL--CT-WRVRGPVTRNSNVVTIGKDI*WADFCEVLTIG----E 331
            P Y  GF+ +T+ +KVL  C+  R +  V  N+ + T        +F E+ TIG     
Sbjct: 170 -PRYSFGFNSSTRDYKVLNICSITRYKLQVNPNNGLSTREVSQRTVEF-EIFTIGCDRGA 227

Query: 330 NTWRYIDEKVPFSYTVKF----SVYANGFIYWGKQSIGIPEKLNAFDVGQEKFKVIRVPH 163
            +WR ID   P+   +      SV A+G I+W  +     E L AFD+ QEKF++I+VP 
Sbjct: 228 GSWRKIDPGYPYDQELHGLSCESVCADGVIHWRHRFFD-QEILLAFDLKQEKFQIIQVPK 286

Query: 162 E 160
           E
Sbjct: 287 E 287


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