BLASTX nr result

ID: Papaver22_contig00034956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034956
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...   155   2e-35
ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   137   5e-30
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21
ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-21
ref|XP_002454813.1| hypothetical protein SORBIDRAFT_04g037930 [S...   103   9e-20

>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 771

 Score =  155 bits (391), Expect = 2e-35
 Identities = 122/349 (34%), Positives = 155/349 (44%), Gaps = 68/349 (19%)
 Frame = +3

Query: 171  FTRYMGSGGPKTFPGGLNKWQWKRMHXXXXXXXXXT------------------------ 278
            FTR MG GGP+TFPGGLNKWQWKR+H         +                        
Sbjct: 24   FTRLMG-GGPRTFPGGLNKWQWKRLHEKRAKEKEKSLLEQEKQLYQARIRSQIRSKLAGE 82

Query: 279  -------------------GALADRFMKEGAEDLWNENDGPL-----KSSQNGNPLESSQ 386
                                ALADRFMKEGAEDLWNE+DGPL     KS+Q    + S+Q
Sbjct: 83   PDSNPNTNNYSATSPKDHIKALADRFMKEGAEDLWNEDDGPLTSQLPKSNQRSGSIGSNQ 142

Query: 387  NDXXXXXXXXXXXXRMDLRNL-----------------VGKHNLGTKVEIDHQLLGQRRF 515
                           ++ R++                 V   NLG K   +   L +R  
Sbjct: 143  RPGSINTPIDLRKVMLEARSVHNFENLSYNYTKTREYSVNSFNLGQKQSNESDNLKKRGL 202

Query: 516  YSVG-REFRKNYKFRRNXXXXXXXXXXXXXXXXXXXKNMMSGATLGAHDKKKIRRVPKWS 692
             S   R FR+N                         + + S A LG +D K  +RVP   
Sbjct: 203  ISQKVRRFRRNESSSGEDDGDYDCDNEREKKGRNVREIIGSRAALGKYDVKISKRVPL-- 260

Query: 693  GEDDEIDLSQRVRLIRDEL--RMRKSVPIEEERRLNEGGLTLSEKRFEELGISPLTIKAL 866
                E++       IR EL  +M+      E+  ++E    L ++RF+E GISPLT+KAL
Sbjct: 261  ---KELEEETDFEFIRYELENKMKLDRNDREKSEIDEQESILGQRRFDECGISPLTVKAL 317

Query: 867  TLAGYSKMTKVQEATLSVSLDGMLVFPCQTGKDALVKAKTGSGKTAAFL 1013
            T AGY +MT+VQEATLS          C  GKDALVKAKTG+GK+AAFL
Sbjct: 318  TTAGYVQMTRVQEATLSA---------CLEGKDALVKAKTGTGKSAAFL 357


>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
            [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
            protein product [Vitis vinifera]
          Length = 754

 Score =  137 bits (344), Expect = 5e-30
 Identities = 109/257 (42%), Positives = 136/257 (52%), Gaps = 13/257 (5%)
 Frame = +3

Query: 282  ALADRFMKEGAEDLWNENDGPLKSSQNGNPLESSQNDXXXXXXXXXXXXRMDLRNLVGK- 458
            ALADRFMKEGAEDLWN++DGP+KS     PL   +               +DLR L    
Sbjct: 105  ALADRFMKEGAEDLWNDDDGPVKSP----PLLPRRPSNGLSRQIEPP---VDLRKLTSHG 157

Query: 459  HNLGT-KVEIDHQLLGQRRF-YSVGREFRKNYKFRRNXXXXXXXXXXXXXXXXXXX---- 620
             +LG     I  + L  R +   V R FR+N     +                       
Sbjct: 158  RSLGPGNARIVSRALKPRHYSVQVRRRFRRNESSSSDDGSDVSSGDEFSGRLVDDDVELR 217

Query: 621  -----KNMMSGATLGAHDKKKIRRV-PKWSGEDDEIDLSQRVRLIRDELRMRKSVPIEEE 782
                 + MMS A LG +D K  RRV PK   E D  D S+++ LIR EL  RK++  EEE
Sbjct: 218  GRRNVQKMMSSAALGKYDVKIKRRVMPKSIDEGD--DFSEQIELIRHELS-RKNLAEEEE 274

Query: 783  RRLNEGGLTLSEKRFEELGISPLTIKALTLAGYSKMTKVQEATLSVSLDGMLVFPCQTGK 962
            +   E    LS+KRF+E G+SPLT+KAL+ AGY +MT+VQEATL V         C  GK
Sbjct: 275  KGDEES--ILSQKRFDECGVSPLTVKALSSAGYVQMTRVQEATLDV---------CLEGK 323

Query: 963  DALVKAKTGSGKTAAFL 1013
            DALVKAKTG+GK+AAFL
Sbjct: 324  DALVKAKTGTGKSAAFL 340


>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
            predicted protein [Populus trichocarpa]
          Length = 798

 Score =  108 bits (271), Expect = 2e-21
 Identities = 68/127 (53%), Positives = 83/127 (65%)
 Frame = +3

Query: 633  SGATLGAHDKKKIRRVPKWSGEDDEIDLSQRVRLIRDELRMRKSVPIEEERRLNEGGLTL 812
            S A LG +D KK RRVP    E D+ D +  V LIR EL  +K     E  +  E  + L
Sbjct: 269  SRAALGKYDMKKTRRVPL--KELDKNDFANEVELIRYELGRKKKFAGNEGDKEEEDSI-L 325

Query: 813  SEKRFEELGISPLTIKALTLAGYSKMTKVQEATLSVSLDGMLVFPCQTGKDALVKAKTGS 992
            SEKRF+E G+SPLT+KAL  AGY +MT+VQEATLSV L        + GKDA+VKAKTG+
Sbjct: 326  SEKRFDECGLSPLTVKALIAAGYVQMTRVQEATLSVCL--------EAGKDAMVKAKTGT 377

Query: 993  GKTAAFL 1013
            GK+AAFL
Sbjct: 378  GKSAAFL 384


>ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|222845308|gb|EEE82855.1|
            predicted protein [Populus trichocarpa]
          Length = 784

 Score =  108 bits (269), Expect = 3e-21
 Identities = 67/131 (51%), Positives = 86/131 (65%)
 Frame = +3

Query: 621  KNMMSGATLGAHDKKKIRRVPKWSGEDDEIDLSQRVRLIRDELRMRKSVPIEEERRLNEG 800
            K + S   LG +D KK RRVP  S E ++ D +  V LIR EL  +K +   +    +E 
Sbjct: 251  KEIGSRDALGKYDVKKTRRVP--SKELEKNDFANEVELIRYELGRKKKLAGNDGDNEDED 308

Query: 801  GLTLSEKRFEELGISPLTIKALTLAGYSKMTKVQEATLSVSLDGMLVFPCQTGKDALVKA 980
             + LS+KRF+E G+SPLT+KALT AGY +MT+VQEATLSV L        + GKDA+VKA
Sbjct: 309  SI-LSDKRFDECGLSPLTVKALTAAGYVQMTRVQEATLSVCL--------EAGKDAMVKA 359

Query: 981  KTGSGKTAAFL 1013
            KTG GK+AAFL
Sbjct: 360  KTGKGKSAAFL 370


>ref|XP_002454813.1| hypothetical protein SORBIDRAFT_04g037930 [Sorghum bicolor]
            gi|241934644|gb|EES07789.1| hypothetical protein
            SORBIDRAFT_04g037930 [Sorghum bicolor]
          Length = 823

 Score =  103 bits (256), Expect = 9e-20
 Identities = 81/217 (37%), Positives = 108/217 (49%), Gaps = 23/217 (10%)
 Frame = +3

Query: 432  MDLRNLV--GKHNLGT-KVEIDHQLLGQRRFYSV-----GREFR---------------K 542
            +DLR LV  G   +G  + E    L  Q R YSV     GR++R               +
Sbjct: 203  VDLRPLVARGLTEVGNGRREAPLPLFNQERLYSVAARRFGRKWRPDSSDDDDEGTSAPKR 262

Query: 543  NYKFRRNXXXXXXXXXXXXXXXXXXXKNMMSGATLGAHDKKKIRRVPKWSGEDDEIDLSQ 722
            N +F +                    +   S A L   D KK RRV K+  E++  DL+ 
Sbjct: 263  NLRFGKFGASSEEDSEIDESGDTGAIRRRWSSAALRNCDMKKERRVLKYY-EEESNDLAG 321

Query: 723  RVRLIRDELRMRKSVPIEEERRLNEGGLTLSEKRFEELGISPLTIKALTLAGYSKMTKVQ 902
            R+R +R+E+R R+ +  E  R  + G   L+ KRF+E G+SPLT+KALT AGY   T VQ
Sbjct: 322  RIRELREEIRNREVLGTERRRYESRGESLLTSKRFDECGVSPLTVKALTDAGYVHTTVVQ 381

Query: 903  EATLSVSLDGMLVFPCQTGKDALVKAKTGSGKTAAFL 1013
            EA L +         C  GKD LVKAKTG+GK+AAFL
Sbjct: 382  EAALPI---------CLEGKDVLVKAKTGTGKSAAFL 409


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