BLASTX nr result

ID: Papaver22_contig00034885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034885
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    54   2e-15
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    60   5e-15
gb|EEC73664.1| hypothetical protein OsI_08202 [Oryza sativa Indi...    64   9e-14
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    62   1e-13
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    50   2e-13

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 53.9 bits (128), Expect(2) = 2e-15
 Identities = 27/69 (39%), Positives = 39/69 (56%)
 Frame = -1

Query: 429  DCLIFCDANATASHNLVELFKDFGTSSGKLINLSKSGVFFSPKTNPNIVNEVIIILGVNV 250
            D L+FCDA  T    L  +F  +  +SG+ IN  KS + FSPK+   I      IL + V
Sbjct: 972  DSLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICFSPKSPAAIKEACSAILDMPV 1031

Query: 249  IPLNDKYLG 223
            +P +++YLG
Sbjct: 1032 VPCHERYLG 1040



 Score = 52.8 bits (125), Expect(2) = 2e-15
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
 Frame = -3

Query: 220  PLFTHRSKIKSFEPMVDKMKNRLLGW--KNLNVAGRSVMIKNVTFSLCVYQMN*FKIPVK 47
            P  + + K K F+ + D++ NR+ GW  K L+ AG+ V+IK V  ++  Y M+ F++P  
Sbjct: 1042 PTVSGKDKKKLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAG 1101

Query: 46   ICNTITKMQRDFWWG 2
              + I K    FWWG
Sbjct: 1102 TSDAINKCVARFWWG 1116


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 59.7 bits (143), Expect(2) = 5e-15
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
 Frame = -3

Query: 220  PLFTHRSKIKSFEPMVDKMKNRLLGWKN--LNVAGRSVMIKNVTFSLCVYQMN*FKIPVK 47
            P F HRSK K+   + D +  ++ GWK   L+ AG+ V+IK V  ++  Y M  FK P  
Sbjct: 1363 PTFWHRSKKKALGFIKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPST 1422

Query: 46   ICNTITKMQRDFWWG 2
            +C  +  +  DFWWG
Sbjct: 1423 LCKELNGILADFWWG 1437



 Score = 45.8 bits (107), Expect(2) = 5e-15
 Identities = 25/69 (36%), Positives = 36/69 (52%)
 Frame = -1

Query: 429  DCLIFCDANATASHNLVELFKDFGTSSGKLINLSKSGVFFSPKTNPNIVNEVIIILGVNV 250
            D L F  A       L +L   +  +SG+LIN+ KS +FFSP T P I + +  I+ + V
Sbjct: 1293 DSLFFLRATLQNCETLSDLLHTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPV 1352

Query: 249  IPLNDKYLG 223
            +     YLG
Sbjct: 1353 VSDPGTYLG 1361


>gb|EEC73664.1| hypothetical protein OsI_08202 [Oryza sativa Indica Group]
          Length = 725

 Score = 64.3 bits (155), Expect(2) = 9e-14
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
 Frame = -3

Query: 223 FPLFTHRSKIKSFEPMVDKMKNRLLGWKN--LNVAGRSVMIKNVTFSLCVYQMN*FKIPV 50
           FP    R     F+P+ DK+  RL+ W    L+V G+ ++IK V  ++ VY M  FK+P 
Sbjct: 402 FPTPEGRMNKGKFQPLHDKLWKRLIQWGENYLSVGGKEILIKAVIQAIPVYVMGLFKLPD 461

Query: 49  KICNTITKMQRDFWWG 2
            ICN +T + R+FWWG
Sbjct: 462 SICNDLTNLTRNFWWG 477



 Score = 37.0 bits (84), Expect(2) = 9e-14
 Identities = 19/69 (27%), Positives = 35/69 (50%)
 Frame = -1

Query: 429 DCLIFCDANATASHNLVELFKDFGTSSGKLINLSKSGVFFSPKTNPNIVNEVIIILGVNV 250
           D L+F  AN   +  +  +  D+  ++G+LIN +K  + F   +   I +++  IL +  
Sbjct: 333 DTLLFFKANRLQARVIHGILGDYAAATGQLINPAKCSIMFGDVSPTEIKDDIRNILQIGS 392

Query: 249 IPLNDKYLG 223
               D+YLG
Sbjct: 393 NAFEDRYLG 401


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 62.0 bits (149), Expect(2) = 1e-13
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
 Frame = -3

Query: 205  RSKIKSFEPMVDKMKNRLLGW--KNLNVAGRSVMIKNVTFSLCVYQMN*FKIPVKICNTI 32
            R K++ FE +V K+K R  GW    L+ AG+ ++IK +  +L VY MN F +P  ICN I
Sbjct: 1121 RRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCFLLPTLICNEI 1180

Query: 31   TKMQRDFWWG 2
              +   FWWG
Sbjct: 1181 NSLITAFWWG 1190



 Score = 38.9 bits (89), Expect(2) = 1e-13
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = -1

Query: 429  DCLIFCDANATASHNLVELFKDFGTSSGKLINLSKSGVFFSPKTNPNIVNEVIIILGVNV 250
            D L FC A+      L  +FK +  +SG+ IN +KS + F  K        +  +LG++ 
Sbjct: 1046 DSLFFCRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDN 1105

Query: 249  IPLNDKYLG 223
            +    KYLG
Sbjct: 1106 VRGGGKYLG 1114


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 50.1 bits (118), Expect(2) = 2e-13
 Identities = 28/83 (33%), Positives = 44/83 (53%)
 Frame = -1

Query: 429 DCLIFCDANATASHNLVELFKDFGTSSGKLINLSKSGVFFSPKTNPNIVNEVIIILGVNV 250
           D L FC AN      ++E+ K + + SG+ IN SKS + F  K   +I  ++ +ILG++ 
Sbjct: 468 DSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHN 527

Query: 249 IPLNDKYLGSLSSLIDQRLKVLN 181
           +     YLG   SL   + KV +
Sbjct: 528 LGGMGSYLGLPESLGGSKTKVFS 550



 Score = 50.1 bits (118), Expect(2) = 2e-13
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
 Frame = -3

Query: 202 SKIKSFEPMVDKMKNRLLGW--KNLNVAGRSVMIKNVTFSLCVYQMN*FKIPVKICNTIT 29
           SK K F  + D++++R+ GW  K L+  G+ VMIK+V  +L  Y M+ F++P  I + +T
Sbjct: 544 SKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLT 603

Query: 28  KMQRDFWW 5
                FWW
Sbjct: 604 SAVAKFWW 611


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