BLASTX nr result

ID: Papaver22_contig00034869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034869
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    62   1e-07

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 34/117 (29%), Positives = 58/117 (49%)
 Frame = -2

Query: 616  VNKELLMKLLWKIQSFDTGWAKFFLPKHKDKHGNWIKYRRQSSVWPGIKWVTQASNDHTR 437
            +N   ++KL W + S ++ WA   L +     G  I+Y  +SSVW G+K        +  
Sbjct: 798  INNAAMLKLAWNLLSSNSQWA-VLLKRRFFSQGQPIRYFVKSSVWHGVKNHMSILRQNKL 856

Query: 436  WIIGSGDKSVVWNDAWVLDTAIIKLFPDDP*INLHMNMKVKDLIVENQ*RIPKEVYI 266
            WI+G+GD+  +W + W L   ++ LF  DP  +     KV ++IV     +P  + +
Sbjct: 857  WIVGTGDRINLWTNNW-LGEPLVTLFNIDPFFHASFTGKVSEVIVNGNWDLPASLLV 912


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