BLASTX nr result

ID: Papaver22_contig00034777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034777
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]          114   1e-23
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     97   2e-18
gb|ABD63180.1| F7F22.15, related [Asparagus officinalis]               89   3e-16
gb|ABG37671.1| integrase [Populus trichocarpa]                         88   7e-16
gb|ABG37668.1| gag protein [Populus trichocarpa]                       88   7e-16

>gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]
          Length = 725

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
 Frame = +3

Query: 51  QKTEMAIKDIQTQMGQLATTVSKLEAQAAGKLPSQSVNHKENVNSIELRSGKQLEKPATS 230
           Q+ E++I +++ Q+GQL T ++++ ++ + KLPSQ+  +  NVNSI LRS    ++    
Sbjct: 355 QRIEVSIHNLENQIGQLVTRMNEMNSKGSDKLPSQTAINPHNVNSITLRSENDNQR---- 410

Query: 231 PEANERDLEKEVDETVPKKDDSVTHSNSKPLVSTYVTPPPFPSRFAKSNK--ETLDKEIW 404
              N R+ + +V    P+    V        +     P PFP R  ++++  E  DKEI 
Sbjct: 411 -RINTRNKDMDVP---PRPSHEVDIQGGNASLDRPSIPLPFPQRVVQTSRKMEKTDKEIL 466

Query: 405 EIFKKIEVNIPLIEAIRQVPRWAKFLKELCTNKHKLTGNE 524
           E F+K+EVNIPL++ I+Q+PR+AKF K+LCT+K +L GNE
Sbjct: 467 ETFRKVEVNIPLLDVIKQIPRYAKFFKDLCTHKRRLKGNE 506


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 64/176 (36%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
 Frame = +3

Query: 15  LNLILNTMTQDKQKTEMAIKDIQTQMGQLATTVSKLEAQAAGKLPSQSV----------N 164
           LN  + T  Q       AI  ++TQ+GQLA  VS+ E    GK PSQ V          N
Sbjct: 341 LNSFMQTTGQVLNSNTQAIARLETQLGQLAAAVSEREK---GKFPSQPVANPKDTGSSSN 397

Query: 165 HKENVNSIE-LRSGKQLEKPATSPEANERDLEKEV--DETVPKKDDSVTHSNSKPLVSTY 335
           +   +N+I  LRSGKQ++     P        +    DET+P  DD       +P +  Y
Sbjct: 398 NPAQLNAIHTLRSGKQIDNQVRMPPDQTPSPIQNTPSDETIPS-DDQNAELEIEPDLDRY 456

Query: 336 VTPPPFPSRFAKSNKETLDKEIWEIFKKIEVNIPLIEAIRQVPRWAKFLKELCTNK 503
               PFP R          ++I E FK++++NIPL++AI Q+P +AKFLK+LCT K
Sbjct: 457 RPVAPFPDRLKPRKNSPQVEKILETFKQVKINIPLLDAIEQIPSYAKFLKDLCTKK 512


>gb|ABD63180.1| F7F22.15, related [Asparagus officinalis]
          Length = 481

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
 Frame = +3

Query: 15  LNLILNTMTQDKQKTEMAIKDIQTQMGQLATTVSKLEAQAAGKLPSQSVNHKEN------ 176
           LN  + +  Q       AI  +++Q+ QLA+ VS+ E +   K PSQ V +  N      
Sbjct: 92  LNSFMQSTGQMLNSNTQAIARLESQLSQLASAVSEREKE---KFPSQPVVNPNNTGCSSS 148

Query: 177 ----VNSIE-LRSGKQLEKPATSPEANERDL---------EKEVDETVPKKDDSVTHSNS 314
               VN+I  LRSG+Q++    +P +   D          ++ + +++P  D        
Sbjct: 149 YEAQVNAIHSLRSGRQVDNQVRTPPSQTLDTVQIPSPSPSDESIQQSLPSDDQE---PEP 205

Query: 315 KPLVSTYVTPPPFPSRFAKSNKETLDKEIWEIFKKIEVNIPLIEAIRQVPRWAKFLKELC 494
           +P    +    PFP R         +++I E FK+++VNIPL++ I Q+P +AKFLKELC
Sbjct: 206 EPAFDRFRPVAPFPDRLRSRKHSPQEEKILETFKQVKVNIPLLDVIEQIPSYAKFLKELC 265

Query: 495 TNKHKL 512
           T K ++
Sbjct: 266 TKKRRI 271


>gb|ABG37671.1| integrase [Populus trichocarpa]
          Length = 1332

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 61/155 (39%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
 Frame = +3

Query: 99  LATTVSKLEAQAAGKLPSQ---------SVN-------HKENVNS-IELRSGKQLEKPAT 227
           LA   S L  Q  GK PSQ         +VN       H + V S I LRSGK +EKP  
Sbjct: 8   LAKLTSVLSFQEKGKFPSQPQQNPKGQYNVNASSSGSQHMDQVKSVITLRSGKVIEKPIL 67

Query: 228 SPEANERDLEKEVDETVPKKDDSVTHSNSKPLVSTYVTPPPFPSRFAKSNKETLDKEIWE 407
            P       EK+ DE++ K  + V   + K    + +   PFP    K  K   + EI+E
Sbjct: 68  EP------CEKD-DESISKGKEEVESEHCKEKTDS-LPAHPFPHAMTKQRKVNHNSEIFE 119

Query: 408 IFKKIEVNIPLIEAIRQVPRWAKFLKELCTNKHKL 512
            FK++ +NIPL++AI++VP +AKFLK+LCT K KL
Sbjct: 120 TFKQVRINIPLLDAIKEVPSYAKFLKDLCTVKRKL 154


>gb|ABG37668.1| gag protein [Populus trichocarpa]
          Length = 1886

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 68/183 (37%), Positives = 90/183 (49%), Gaps = 27/183 (14%)
 Frame = +3

Query: 45  DKQKTEMAIKDIQTQMGQ--------LATTVSKLEAQAAGKLPSQSVN------------ 164
           +KQ+T      I TQ+ Q        LA   S L  Q  GK PSQ               
Sbjct: 136 EKQET------INTQLAQSMTNFKDALAKFTSALSFQEKGKFPSQPQQNPKGQYNANASS 189

Query: 165 ----HKENVNS-IELRSGKQLEKPATSPEANERDLEKEVDETVPKKDDSVTHSNSKPLVS 329
               H + V S I LRSGK +EKP   P       EK+ DE++ +  + V   + K    
Sbjct: 190 SGNQHMDQVKSVITLRSGKVIEKPTLEP------CEKD-DESISEGKEGVESKHCKEKTD 242

Query: 330 TYVTPP--PFPSRFAKSNKETLDKEIWEIFKKIEVNIPLIEAIRQVPRWAKFLKELCTNK 503
           +   PP  PFP   +K  K   + EI E FK++ +NIPL++AI+QVP +AKFLK+LCT K
Sbjct: 243 S---PPALPFPHAMSKQRKVNHNSEILETFKQVRINIPLLDAIKQVPSYAKFLKDLCTVK 299

Query: 504 HKL 512
            KL
Sbjct: 300 RKL 302


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