BLASTX nr result

ID: Papaver22_contig00034717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034717
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25
emb|CBI29835.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ...   105   5e-21
ref|XP_002529506.1| pentatricopeptide repeat-containing protein,...   104   8e-21

>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/81 (66%), Positives = 68/81 (83%)
 Frame = +1

Query: 220 FVDYDKGKHQKISIQVTGLRKDDIQKRYRLRVDGDPSQKDWTISEVVEKILKLKHWDDID 399
           FVDYD GKHQ +S  V+GLRK DI K YRLRV+ D  QKDW++SEVVE++LKL HWDD++
Sbjct: 56  FVDYDNGKHQ-VSTHVSGLRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVE 114

Query: 400 GKVLNRWAGRFARKNYPLLVQ 462
           G +LNRW GRF+RKN+PLL++
Sbjct: 115 G-LLNRWVGRFSRKNFPLLIR 134


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/81 (66%), Positives = 68/81 (83%)
 Frame = +1

Query: 220 FVDYDKGKHQKISIQVTGLRKDDIQKRYRLRVDGDPSQKDWTISEVVEKILKLKHWDDID 399
           FVDYD GKHQ +S  V+GLRK DI K YRLRV+ D  QKDW++SEVVE++LKL HWDD++
Sbjct: 56  FVDYDNGKHQ-VSTHVSGLRKADIPKHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVE 114

Query: 400 GKVLNRWAGRFARKNYPLLVQ 462
           G +LNRW GRF+RKN+PLL++
Sbjct: 115 G-LLNRWVGRFSRKNFPLLIR 134


>ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|222854915|gb|EEE92462.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/83 (62%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
 Frame = +1

Query: 217 GFVDYDKGKHQKISIQVTGLRKDDIQKRYRLRVDGDPSQKDWTISEVVEKILKLKHW-DD 393
           GFVDYDKG H  +S QV+G+RKD I +RYR+RV GD  QKDW++S+VV+K+L+L H  DD
Sbjct: 27  GFVDYDKGIHH-VSTQVSGIRKDQIPQRYRIRVQGDRFQKDWSVSQVVQKVLELDHKSDD 85

Query: 394 IDGKVLNRWAGRFARKNYPLLVQ 462
           ++G +LNRW GRFARKN+PLL++
Sbjct: 86  VEG-LLNRWVGRFARKNFPLLIK 107


>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500155|gb|AES81358.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 855

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/82 (60%), Positives = 65/82 (79%)
 Frame = +1

Query: 217 GFVDYDKGKHQKISIQVTGLRKDDIQKRYRLRVDGDPSQKDWTISEVVEKILKLKHWDDI 396
           GFVDYD+G HQ +S +++GLRK+DI   YRLRV G+  QKDWT+SEVV+ +L L   DDI
Sbjct: 43  GFVDYDRGHHQ-VSTKISGLRKEDIPAHYRLRVAGNRFQKDWTVSEVVDSVLSLTLRDDI 101

Query: 397 DGKVLNRWAGRFARKNYPLLVQ 462
           +G +LNRW GRFARKN+P L++
Sbjct: 102 EG-LLNRWIGRFARKNFPFLIR 122


>ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531022|gb|EEF32875.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 808

 Score =  104 bits (259), Expect = 8e-21
 Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
 Frame = +1

Query: 217 GFVDYDKGKHQKISIQVTGLRKDDIQKRYRLRVDGDPSQKDWTISEVVEKILKLK-HWDD 393
           GFVDYD G+HQ +S QVTG RK D+QKRYRL+V GD  Q+DWT+S+VV KIL+L   +DD
Sbjct: 35  GFVDYDTGQHQ-VSTQVTGFRKCDLQKRYRLKVGGDRFQRDWTLSQVVSKILELNPKYDD 93

Query: 394 IDGKVLNRWAGRFARKNYPLLVQ 462
           ++  VLN W GRFARKN+P L++
Sbjct: 94  VE-VVLNHWIGRFARKNFPRLIK 115


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