BLASTX nr result

ID: Papaver22_contig00034619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034619
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_740245.1| hypothetical chloroplast RF2 [Liriodendron tuli...   122   3e-26
gb|ADD30889.1| putative RF2 protein [Ximenia americana] gi|34080...   122   6e-26
gb|AEK78171.1| hypothetical chloroplast RF2 [Saruma henryi]           121   1e-25
gb|AEX99130.1| hypothetical chloroplast RF2 (chloroplast) [Magno...   119   3e-25
ref|YP_007474579.1| hypothetical chloroplast RF2 (chloroplast) [...   119   3e-25

>ref|YP_740245.1| hypothetical chloroplast RF2 [Liriodendron tulipifera]
            gi|114107109|ref|YP_740264.1| hypothetical chloroplast
            RF2 [Liriodendron tulipifera]
            gi|122246286|sp|Q0G9F7.1|YCF2_LIRTU RecName: Full=Protein
            ycf2 gi|113201037|gb|ABI32552.1| hypothetical chloroplast
            RF2 [Liriodendron tulipifera] gi|113201057|gb|ABI32572.1|
            hypothetical chloroplast RF2 [Liriodendron tulipifera]
          Length = 2292

 Score =  122 bits (307), Expect = 3e-26
 Identities = 57/66 (86%), Positives = 60/66 (90%), Gaps = 4/66 (6%)
 Frame = -2

Query: 565  LMQNGSCSFVDQRFLYEKNESEFEGG----ALDPQQIEEDLFNHIVWAPRIWRPCGSLFD 398
            +MQNGSCS VDQRFLYEK ESEFEGG    ALDPQQIEEDLFNHIVWAPRIWRPCG+LFD
Sbjct: 2036 MMQNGSCSIVDQRFLYEKYESEFEGGEGEGALDPQQIEEDLFNHIVWAPRIWRPCGNLFD 2095

Query: 397  CIERSN 380
            CIER+N
Sbjct: 2096 CIERTN 2101


>gb|ADD30889.1| putative RF2 protein [Ximenia americana] gi|340807071|gb|AEK71677.1|
            hypothetical chloroplast RF2 [Ximenia americana]
          Length = 2285

 Score =  122 bits (305), Expect = 6e-26
 Identities = 56/63 (88%), Positives = 58/63 (92%)
 Frame = -2

Query: 565  LMQNGSCSFVDQRFLYEKNESEFEGGALDPQQIEEDLFNHIVWAPRIWRPCGSLFDCIER 386
            +MQNGSCS VDQRFLYEK+ESEFE GALDPQQIEEDLFNHIVWAPRIWRP G LFDCIER
Sbjct: 2030 MMQNGSCSIVDQRFLYEKDESEFEEGALDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIER 2089

Query: 385  SNS 377
             NS
Sbjct: 2090 PNS 2092


>gb|AEK78171.1| hypothetical chloroplast RF2 [Saruma henryi]
          Length = 2307

 Score =  121 bits (303), Expect = 1e-25
 Identities = 57/65 (87%), Positives = 59/65 (90%), Gaps = 2/65 (3%)
 Frame = -2

Query: 565  LMQNGSCSFVDQRFLYEKNESEFEGG--ALDPQQIEEDLFNHIVWAPRIWRPCGSLFDCI 392
            +MQNGSCS VDQRFLYEK ESEFE G  ALDPQQIEEDLFNHIVWAPRIWRPCG+LFDCI
Sbjct: 2049 MMQNGSCSIVDQRFLYEKYESEFEEGEGALDPQQIEEDLFNHIVWAPRIWRPCGNLFDCI 2108

Query: 391  ERSNS 377
            ER NS
Sbjct: 2109 ERPNS 2113


>gb|AEX99130.1| hypothetical chloroplast RF2 (chloroplast) [Magnolia grandiflora]
          Length = 2298

 Score =  119 bits (299), Expect = 3e-25
 Identities = 56/66 (84%), Positives = 59/66 (89%), Gaps = 4/66 (6%)
 Frame = -2

Query: 565  LMQNGSCSFVDQRFLYEKNESEFEGG----ALDPQQIEEDLFNHIVWAPRIWRPCGSLFD 398
            +MQNGSCS VDQRFLYEK ESEFE G    ALDPQQIEEDLFNHIVWAPRIWRPCG+LFD
Sbjct: 2039 MMQNGSCSIVDQRFLYEKYESEFEEGEGEGALDPQQIEEDLFNHIVWAPRIWRPCGNLFD 2098

Query: 397  CIERSN 380
            CIER+N
Sbjct: 2099 CIERTN 2104


>ref|YP_007474579.1| hypothetical chloroplast RF2 (chloroplast) [Magnolia grandiflora]
            gi|452848915|ref|YP_007474596.1| photosystem I assembly
            protein Ycf2 (chloroplast) [Magnolia grandiflora]
            gi|372862885|gb|AEX98961.1| hypothetical chloroplast RF2
            (chloroplast) [Magnolia grandiflora]
            gi|372862902|gb|AEX98978.1| photosystem I assembly
            protein Ycf2 (chloroplast) [Magnolia grandiflora]
          Length = 2298

 Score =  119 bits (299), Expect = 3e-25
 Identities = 56/66 (84%), Positives = 59/66 (89%), Gaps = 4/66 (6%)
 Frame = -2

Query: 565  LMQNGSCSFVDQRFLYEKNESEFEGG----ALDPQQIEEDLFNHIVWAPRIWRPCGSLFD 398
            +MQNGSCS VDQRFLYEK ESEFE G    ALDPQQIEEDLFNHIVWAPRIWRPCG+LFD
Sbjct: 2039 MMQNGSCSIVDQRFLYEKYESEFEEGEGEGALDPQQIEEDLFNHIVWAPRIWRPCGNLFD 2098

Query: 397  CIERSN 380
            CIER+N
Sbjct: 2099 CIERTN 2104


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