BLASTX nr result

ID: Papaver22_contig00034538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034538
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatul...    63   3e-08
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    60   2e-07
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    60   2e-07
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
 Frame = -2

Query: 558 AVQTCVLSKRWMYVWKSLPTLNLDC*VHWSPARRSGDGLIHFLDKVFSLRDRSDIQRFQL 379
           AV+T +LSK+W+++WKS  T NL      SP R+     + F+D+V +LR  S+I +F L
Sbjct: 48  AVRTSILSKKWLHLWKS--TTNLTFFGLKSPKRKL---FMDFVDRVLALRGPSNIVQFYL 102

Query: 378 CCSDMHINISSVQVYRWIASAVSLNVQDLCIDINHIRGDFEIPSCLATCKSXXXXXXXXX 199
            C    +     +V  WI++AV+ NV+DL +++      F +P CL  C++         
Sbjct: 103 SCE---VKDDPSRVGTWISAAVNRNVKDLYLELRDFEASFVLPHCLFNCET--------- 150

Query: 198 LRHFEDRKKIILPITIXXXXXXXXXXXXXXLAFDDENSVTEFFSSFPALESLELY-CEFP 22
           L   E     IL +                + F D++S  + F S P L  LE++ C + 
Sbjct: 151 LTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDHSTQQLF-SLPNLVELEIHECNWM 209

Query: 21  NM 16
           N+
Sbjct: 210 NL 211


>ref|XP_003596627.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485675|gb|AES66878.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 436

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
 Frame = -2

Query: 558 AVQTCVLSKRWMYVWKSLPTLNLDC*VHWSPARRSGDGLIHFLDKVFSLRDRSDIQRFQL 379
           AV+T VLSK+W+Y+WK +  L+ D   H+S  +    G + F+D+V    + + IQ F L
Sbjct: 44  AVRTSVLSKKWIYLWKFITKLDFDDKNHFSLNKIRKKGFVDFVDRVLLHLNSAHIQSFSL 103

Query: 378 CCSD--MHINISSVQVYRWIASAVSLNVQDLCI 286
             S+   +  I+S  + +WI+  V+L V++LCI
Sbjct: 104 KMSEEYNYFYINSFNINKWISVVVNLRVRNLCI 136


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
 Frame = -2

Query: 558 AVQTCVLSKRWMYVWKSLPTLNLDC*VHWSPARRS--GDGLIHFLDKVFSLRDRSDIQRF 385
           A  T VLSK+W Y++  +P L+LD  V+ +P   +      + F+D+V +L+  S + +F
Sbjct: 30  AASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMDFVDRVLALQGNSPLHKF 89

Query: 384 QLCCSDMHINISSVQVYRWIASAVSLNVQDLCIDINHIRGDFEIPSCLATCKS 226
            L   D    I  V++  WI + +   V DL + +N +  +F +PS +  CK+
Sbjct: 90  SLKIGD---GIDPVRIIPWINNVLERGVSDLDLHLN-LESEFLLPSQVYLCKT 138


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14103
           gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
           thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 381

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
 Frame = -2

Query: 558 AVQTCVLSKRWMYVWKSLPTLNLDC*VHWSPARRS--GDGLIHFLDKVFSLRDRSDIQRF 385
           A  T VLSK+W Y++  +P L+LD  V+ +P   +      + F+D+V +L+  S + +F
Sbjct: 30  AASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEISTSFMDFVDRVLALQGNSPLHKF 89

Query: 384 QLCCSDMHINISSVQVYRWIASAVSLNVQDLCIDINHIRGDFEIPSCLATCKS 226
            L   D    I  V++  WI + +   V DL + +N +  +F +PS +  CK+
Sbjct: 90  SLKIGD---GIDPVRIIPWINNVLERGVSDLDLHLN-LESEFLLPSQVYLCKT 138


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
 Frame = -2

Query: 558 AVQTCVLSKRWMYVWKSLPTLNLDC*VHWSPARRSGDGLIHFLDKVFSLRDRSDIQRFQL 379
           AV+T +LS++W ++WKSL  L      H    +      ++ +++V  LRD S+I++F L
Sbjct: 60  AVRTSILSRKWEHLWKSLSNLEF----HQCYFKAKRKIFMNSVERVLLLRDSSNIEKFTL 115

Query: 378 CCSDMHINISSVQVYRWIASAVSLNVQDLCIDINHIRG----DFEIPSCLATC 232
            C        + +   W+++AV+ NV++LC  +N   G     F  P CL TC
Sbjct: 116 SCG----IDDATRTRTWVSAAVNRNVKELC--VNFYEGGESESFVSPLCLFTC 162


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