BLASTX nr result

ID: Papaver22_contig00034507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034507
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   3e-09
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ...    64   1e-08
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...    63   3e-08
ref|XP_002446678.1| hypothetical protein SORBIDRAFT_06g020403 [S...    62   5e-08
ref|XP_002452516.1| hypothetical protein SORBIDRAFT_04g027285 [S...    62   5e-08

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = -3

Query: 478 LGKLETKNSVLDILNKENPNILFLSETKQQNLEMKNIMKMVNAQNYFLVPPRG----TTG 311
           +G     +++  +L  ENP I+FLSETK ++ EM+++ K +  ++   V   G      G
Sbjct: 12  MGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCEGECRKRRG 71

Query: 310 GLCLIWKSNVKLQIDDHAFXXXXXXXXXXXNDISWALTCFYGSPYRKFKLQS*NIISQLA 131
           GL ++W+S +K+Q+   +                W  T  YG P  + K ++  ++S LA
Sbjct: 72  GLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQG-EWRFTGIYGYPEEEHKDKTGALLSALA 130

Query: 130 DTIIKPWIIIGDLNVVL 80
               +PW+  GD N++L
Sbjct: 131 RASRRPWLCGGDFNLML 147


>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1197

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
 Frame = -3

Query: 478 LGKLETKNSVLDILNKENPNILFLSETKQQNLEMKNIMKMVNAQNYFLVPPRGT-TGGLC 302
           +G  +T   V +IL K +P+++FL ET  Q+  +   +  +   N+FLV P G   GGL 
Sbjct: 8   IGNPKTVRRVREILKKLSPDVIFLMETMNQDEVVLKKLDFLKRYNHFLVSPSGQGKGGLA 67

Query: 301 LIWKSNVKLQIDDHAFXXXXXXXXXXXNDISWALTCFYGSPYRKFKLQS*NIISQLADTI 122
           L WK +V++ I                  IS+  T  YG P +  K  +   +  LAD  
Sbjct: 68  LFWKHDVEMAIVSSC--DNFIDARVSFKRISFLATYVYGEPEQSKKGATWEKLKCLADNR 125

Query: 121 IKPWIIIGDLNVVL 80
            +PW + GD N +L
Sbjct: 126 EEPWFLTGDFNEIL 139


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
 Frame = -3

Query: 457 NSVLDILNKENPNILFLSETKQQNLEMKNIMKMVNAQNYFLVPPRGTTGGLCLIWKSNVK 278
           N +  +L      + F+SET+   +   +++   NA + F++P +G +GGL LIWK +  
Sbjct: 21  NHLARLLTSTKSQVCFISETRNSTISRTSLINRFNALDAFIIPAQGQSGGLWLIWKQDFS 80

Query: 277 LQIDDHAFXXXXXXXXXXXNDISWALTCFYGSPYRKFKLQS*NIISQLADTII----KPW 110
           L I D +            ++  + L C YG P+      + +I  Q+ D ++     P 
Sbjct: 81  LTIVDQSPNYIFALCNNNLDNRQFGLICLYGDPHHH---NTTSIWMQVHDFVVANTNMPM 137

Query: 109 IIIGDLNVVLH 77
             +GDLN ++H
Sbjct: 138 FCMGDLNNIMH 148


>ref|XP_002446678.1| hypothetical protein SORBIDRAFT_06g020403 [Sorghum bicolor]
           gi|241937861|gb|EES11006.1| hypothetical protein
           SORBIDRAFT_06g020403 [Sorghum bicolor]
          Length = 633

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/122 (25%), Positives = 59/122 (48%)
 Frame = -3

Query: 445 DILNKENPNILFLSETKQQNLEMKNIMKMVNAQNYFLVPPRGTTGGLCLIWKSNVKLQID 266
           D+     P+++F+ ET+     ++N+   ++  N F V   G +GGL L W ++V L I 
Sbjct: 355 DLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRSGGLGLFWNNDVLLSIQ 414

Query: 265 DHAFXXXXXXXXXXXNDISWALTCFYGSPYRKFKLQS*NIISQLADTIIKPWIIIGDLNV 86
            ++             +  W ++  YG P R  + ++ +I+ Q+      PW+ +GD N 
Sbjct: 415 KYSNYHIDTIISEHGKE-PWRMSFIYGEPNRSLRFRTWDIMKQMRSDTDLPWVCMGDFNE 473

Query: 85  VL 80
           +L
Sbjct: 474 IL 475


>ref|XP_002452516.1| hypothetical protein SORBIDRAFT_04g027285 [Sorghum bicolor]
           gi|241932347|gb|EES05492.1| hypothetical protein
           SORBIDRAFT_04g027285 [Sorghum bicolor]
          Length = 689

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/122 (25%), Positives = 59/122 (48%)
 Frame = -3

Query: 445 DILNKENPNILFLSETKQQNLEMKNIMKMVNAQNYFLVPPRGTTGGLCLIWKSNVKLQID 266
           D+     P+++F+ ET+     ++N+   ++  N F V   G +GGL L W ++V L I 
Sbjct: 355 DLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRSGGLGLFWNNDVLLSIQ 414

Query: 265 DHAFXXXXXXXXXXXNDISWALTCFYGSPYRKFKLQS*NIISQLADTIIKPWIIIGDLNV 86
            ++             +  W ++  YG P R  + ++ +I+ Q+      PW+ +GD N 
Sbjct: 415 KYSNYHIDTIISEHGKE-PWRMSFIYGEPNRSLRFRTWDIMKQMRSDTDLPWVCMGDFNE 473

Query: 85  VL 80
           +L
Sbjct: 474 IL 475


Top