BLASTX nr result

ID: Papaver22_contig00034482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034482
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]      322   5e-86
ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|2...   320   3e-85
ref|XP_002512491.1| DNA helicase hus2, putative [Ricinus communi...   296   4e-78
ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicag...   291   1e-76
gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thal...   291   1e-76

>gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 617

 Score =  322 bits (826), Expect = 5e-86
 Identities = 164/288 (56%), Positives = 203/288 (70%)
 Frame = +2

Query: 2   CGVLSEMFENEVDGHDYVPEEDNATRDYIDVIEDSPELKKKKQLLRVXXXXXXXXXXXXX 181
           CG L+ MFE  V+ ++    +D+ +R YIDV +DSPE KK +  + +             
Sbjct: 82  CGTLTNMFEEHVEKNNNKANDDDNSRTYIDVTDDSPEPKKTRTFMELD------------ 129

Query: 182 XTRLGCKANPSISLDKMSSHNNTGXXXXXXXXXXXXXXXXXXXXXXXXXXLKNCPRVSEQ 361
            +    +  P  SL++  +H+                              + CPR+S+ 
Sbjct: 130 -SSSDSEEEPDFSLEE-ENHDLFTPLTKRISGSLDCKSSVTQGSVSSVGNKRQCPRMSKD 187

Query: 362 DQVTLGYEDLRALDDIELANVVIFGNKSFRPLQHQACKASLEKRDCFILMPTGGGKSLCY 541
           D  +L YE+L+ALDD ELANVVIFGNK+FRPLQHQACKA++ K+DCF+LMPTGGGKSLCY
Sbjct: 188 DHRSLNYEELQALDDFELANVVIFGNKTFRPLQHQACKATVAKQDCFVLMPTGGGKSLCY 247

Query: 542 QLPATLQTGVTIVVSPLLSLIQDQIVTLNLKYGIPATFLNSQQTSTQAAAVFRELRSNKP 721
           QLPATL+ GVT+V+SPLLSLIQDQI+TLNLK+GI ATFLNSQQTS QAAA+ +ELR +KP
Sbjct: 248 QLPATLKPGVTVVISPLLSLIQDQIITLNLKFGIRATFLNSQQTSAQAAAILQELRKDKP 307

Query: 722 SCKLLYVTPERIAGNASFLDILRCLHQKGQLAGFVVDEAHCVSQWGHD 865
           SCKLLYVTPERIAGN +FL+IL+CLH KGQLAGFVVDEAHCVSQWGHD
Sbjct: 308 SCKLLYVTPERIAGNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHD 355


>ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|222871645|gb|EEF08776.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  320 bits (819), Expect = 3e-85
 Identities = 165/288 (57%), Positives = 201/288 (69%)
 Frame = +2

Query: 2   CGVLSEMFENEVDGHDYVPEEDNATRDYIDVIEDSPELKKKKQLLRVXXXXXXXXXXXXX 181
           CG L+ MFE  V  ++    +D+ +R YIDV +DSPE KK +  + +             
Sbjct: 82  CGTLTNMFEEHVVKNNNKANDDDNSRTYIDVTDDSPEPKKTRTFMELD------------ 129

Query: 182 XTRLGCKANPSISLDKMSSHNNTGXXXXXXXXXXXXXXXXXXXXXXXXXXLKNCPRVSEQ 361
                  ++ S      SS ++ G                           + CPR+S+ 
Sbjct: 130 ------SSSDSEEEPDFSSVSSVGNK-------------------------RQCPRMSKD 158

Query: 362 DQVTLGYEDLRALDDIELANVVIFGNKSFRPLQHQACKASLEKRDCFILMPTGGGKSLCY 541
           D  +L YE+L+ALDD ELANVVIFGNK+FRPLQHQACKA++ K+DCF+LMPTGGGKSLCY
Sbjct: 159 DHRSLNYEELQALDDFELANVVIFGNKTFRPLQHQACKATVAKQDCFVLMPTGGGKSLCY 218

Query: 542 QLPATLQTGVTIVVSPLLSLIQDQIVTLNLKYGIPATFLNSQQTSTQAAAVFRELRSNKP 721
           QLPATL+ GVT+V+SPLLSLIQDQI+TLNLK+GIPATFLNSQQTS QAAA+ +ELR +KP
Sbjct: 219 QLPATLKPGVTVVISPLLSLIQDQIITLNLKFGIPATFLNSQQTSAQAAAILQELRHDKP 278

Query: 722 SCKLLYVTPERIAGNASFLDILRCLHQKGQLAGFVVDEAHCVSQWGHD 865
           SCKLLYVTPERIAGN +FL+IL+CLH KGQLAGFVVDEAHCVSQWGHD
Sbjct: 279 SCKLLYVTPERIAGNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHD 326


>ref|XP_002512491.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223548452|gb|EEF49943.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 586

 Score =  296 bits (758), Expect = 4e-78
 Identities = 142/177 (80%), Positives = 159/177 (89%)
 Frame = +2

Query: 335 KNCPRVSEQDQVTLGYEDLRALDDIELANVVIFGNKSFRPLQHQACKASLEKRDCFILMP 514
           K  P + +  +  L YE+L+ALDD ELANVVIFGN SFRPLQHQACKAS+ KRDCF+LMP
Sbjct: 169 KKHPGIQKDGRPMLSYEELQALDDFELANVVIFGNMSFRPLQHQACKASVAKRDCFVLMP 228

Query: 515 TGGGKSLCYQLPATLQTGVTIVVSPLLSLIQDQIVTLNLKYGIPATFLNSQQTSTQAAAV 694
           TGGGKSLCYQLPATL+ GVT+VVSPLLSLIQDQI+TLNLK+GIPATFLNSQQT++QAAAV
Sbjct: 229 TGGGKSLCYQLPATLKPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQTASQAAAV 288

Query: 695 FRELRSNKPSCKLLYVTPERIAGNASFLDILRCLHQKGQLAGFVVDEAHCVSQWGHD 865
            +ELR +KPSCKLLYVTPERIAGN  FL+IL+CLH KGQLAGFVVDEAHCVSQWGHD
Sbjct: 289 LQELRKDKPSCKLLYVTPERIAGNLGFLEILKCLHWKGQLAGFVVDEAHCVSQWGHD 345


>ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
           gi|355480249|gb|AES61452.1| Bloom syndrome protein-like
           protein [Medicago truncatula]
          Length = 603

 Score =  291 bits (745), Expect = 1e-76
 Identities = 140/165 (84%), Positives = 154/165 (93%)
 Frame = +2

Query: 371 TLGYEDLRALDDIELANVVIFGNKSFRPLQHQACKASLEKRDCFILMPTGGGKSLCYQLP 550
           TL YE+L+ LDDIELANVVIFGNKS RPLQHQACKA+L K+D FILMPTGGGKSLCYQLP
Sbjct: 177 TLSYEELKTLDDIELANVVIFGNKSLRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLP 236

Query: 551 ATLQTGVTIVVSPLLSLIQDQIVTLNLKYGIPATFLNSQQTSTQAAAVFRELRSNKPSCK 730
           ATLQ GVT+VVSPLLSLIQDQI+TLNLK+GIPATFLNSQQ ++QAAAV +ELR +KPSCK
Sbjct: 237 ATLQPGVTVVVSPLLSLIQDQIITLNLKFGIPATFLNSQQNASQAAAVLQELRKDKPSCK 296

Query: 731 LLYVTPERIAGNASFLDILRCLHQKGQLAGFVVDEAHCVSQWGHD 865
           LLYVTPERIAGN SF+ IL+C+HQKGQLAGFVVDEAHCVSQWGHD
Sbjct: 297 LLYVTPERIAGNQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHD 341


>gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thaliana]
          Length = 624

 Score =  291 bits (745), Expect = 1e-76
 Identities = 157/293 (53%), Positives = 195/293 (66%), Gaps = 6/293 (2%)
 Frame = +2

Query: 5   GVLSEMFENEVDGHDY---VPEEDNATRDYIDVIEDSPELKKKKQLLRVXXXXXXXXXXX 175
           G L+EMF+   +  D      ++D+ +R  + VIEDSPE KKK +++ +           
Sbjct: 99  GNLAEMFDKSTNPSDNGFDTDDDDDDSRVEVHVIEDSPEPKKKPEIVELDSSSDLEDVET 158

Query: 176 XXXT---RLGCKANPSISLDKMSSHNNTGXXXXXXXXXXXXXXXXXXXXXXXXXXLKNCP 346
                     C  +   S++   S                                K   
Sbjct: 159 RFKVPRRSQTCSRSMDYSMEDSVS---------------------------TISGRKPSV 191

Query: 347 RVSEQDQVTLGYEDLRALDDIELANVVIFGNKSFRPLQHQACKASLEKRDCFILMPTGGG 526
           ++S +D  T  YE+L+ALDD+E AN+VIFGNK FRPLQHQAC+AS+E++DCF+LMPTGGG
Sbjct: 192 QISNKDHETPSYEELQALDDLEFANLVIFGNKVFRPLQHQACRASMERKDCFVLMPTGGG 251

Query: 527 KSLCYQLPATLQTGVTIVVSPLLSLIQDQIVTLNLKYGIPATFLNSQQTSTQAAAVFREL 706
           KSLCYQLPATL+ GVTIV+SPLLSLIQDQIV LNLK+GIPATFLNSQQTS+QAAAV +EL
Sbjct: 252 KSLCYQLPATLKAGVTIVISPLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQEL 311

Query: 707 RSNKPSCKLLYVTPERIAGNASFLDILRCLHQKGQLAGFVVDEAHCVSQWGHD 865
           R + PSCKLLYVTPE+IAG++SFL+ LRCL +KG LAGFVVDEAHCVSQWGHD
Sbjct: 312 RRDNPSCKLLYVTPEKIAGSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHD 364


Top