BLASTX nr result

ID: Papaver22_contig00034476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034476
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318930.1| global transcription factor group [Populus t...    79   4e-13
ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinu...    79   5e-13
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...    78   9e-13
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...    78   9e-13
ref|XP_002330007.1| global transcription factor group [Populus t...    76   2e-12

>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
            gi|222857306|gb|EEE94853.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1082

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
 Frame = +1

Query: 25   RNKDLKCR-NKELKKFVHKVQETQSADK-TGLPYIIVNF-QALDEFQFAAAYLPTGAPTI 195
            R +D K + N + + FV++V +  S  + +GL    + F Q L E  F    +P    + 
Sbjct: 787  RERDRKNKINMDFQSFVNRVNDLWSQPQFSGLD---LEFDQPLRELGFHG--VPHKVTSF 841

Query: 196  CALTRNNLVVLKEAPYLVVPLWHIQIVNLACFG---DQIDMTVVFKDLERDVLQLGSIPL 366
               T + LV L E P+LVV L  I+IVNL   G      DMT+VFKD +RDVL++ SIP 
Sbjct: 842  IVPTSSCLVELVETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPS 901

Query: 367  EFLAGIKYRLNRKNVKYYVNNLRPNWKELVSEV 465
              L GIK  L+  ++KYY + L  NW++++  +
Sbjct: 902  TSLDGIKEWLDTTDIKYYESRLNLNWRQILKTI 934


>ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223526847|gb|EEF29061.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1050

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 57/153 (37%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
 Frame = +1

Query: 25   RNKDLKCR-NKELKKFVHKVQETQSADK-TGLPYIIVNF-QALDEFQFAAAYLPTGAPTI 195
            R +D K + N + + FV++V +  S  + +GL    + F Q L E  F    +P    + 
Sbjct: 773  RERDRKNKINMDFQSFVNRVNDLWSQSQFSGLD---LEFDQPLRELGFHG--VPYKTSSF 827

Query: 196  CALTRNNLVVLKEAPYLVVPLWHIQIVNLACFG---DQIDMTVVFKDLERDVLQLGSIPL 366
               T + LV L E P+LVV L  I+IVNL   G      DMT+VFKD +RDVL++ SIP 
Sbjct: 828  IVPTSSCLVELIETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPS 887

Query: 367  EFLAGIKYRLNRKNVKYYVNNLRPNWKELVSEV 465
              L GIK  L+  ++KYY + L  NW++++  +
Sbjct: 888  TSLDGIKEWLDTTDIKYYESKLNLNWRQILKTI 920


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
            [Cucumis sativus]
          Length = 1073

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
 Frame = +1

Query: 25   RNKDLKCR-NKELKKFVHKVQETQSADKTGLPYIIVNF-QALDEFQFAAAYLPTGAPTIC 198
            R +D K + N + + FV++V +     + G   + + F Q L E  F    +P  +    
Sbjct: 797  RERDRKNKINMDFQSFVNRVNDLWGQPQFG--GLDLEFDQPLRELGFHG--VPYKSSAFI 852

Query: 199  ALTRNNLVVLKEAPYLVVPLWHIQIVNLACFG---DQIDMTVVFKDLERDVLQLGSIPLE 369
              T   LV L E P+LVV L  I+IVNL   G      DMT+VFKD +RDVL++ SIP  
Sbjct: 853  VPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGQKNFDMTIVFKDFKRDVLRIDSIPST 912

Query: 370  FLAGIKYRLNRKNVKYYVNNLRPNWKELVSEV 465
             L GIK  L+  ++KYY + L  NW++++  +
Sbjct: 913  SLDGIKEWLDTTDIKYYESKLNLNWRQILKTI 944


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
 Frame = +1

Query: 25   RNKDLKCR-NKELKKFVHKVQETQSADKTGLPYIIVNF-QALDEFQFAAAYLPTGAPTIC 198
            R +D K + N + + FV++V +     + G   + + F Q L E  F    +P  +    
Sbjct: 797  RERDRKNKINMDFQSFVNRVNDLWGQPQFG--GLDLEFDQPLRELGFHG--VPYKSSAFI 852

Query: 199  ALTRNNLVVLKEAPYLVVPLWHIQIVNLACFG---DQIDMTVVFKDLERDVLQLGSIPLE 369
              T   LV L E P+LVV L  I+IVNL   G      DMT+VFKD +RDVL++ SIP  
Sbjct: 853  VPTSTCLVELIETPFLVVTLGEIEIVNLERVGFGQKNFDMTIVFKDFKRDVLRIDSIPST 912

Query: 370  FLAGIKYRLNRKNVKYYVNNLRPNWKELVSEV 465
             L GIK  L+  ++KYY + L  NW++++  +
Sbjct: 913  SLDGIKEWLDTTDIKYYESKLNLNWRQILKTI 944


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
            gi|222871432|gb|EEF08563.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1065

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
 Frame = +1

Query: 49   NKELKKFVHKVQETQSADK-TGLPYIIVNF-QALDEFQFAAAYLPTGAPTICALTRNNLV 222
            N + + FV++V +  +  + +GL    + F Q L E  F    +P    +    T + LV
Sbjct: 796  NMDFQSFVNRVNDLWAQPQFSGLD---LEFDQPLRELGFHG--VPHKVTSFIVPTSSCLV 850

Query: 223  VLKEAPYLVVPLWHIQIVNLACFG---DQIDMTVVFKDLERDVLQLGSIPLEFLAGIKYR 393
             L E P+LVV L  I+IVNL   G      DMT+VFKD +RDVL++ SIP   L GIK  
Sbjct: 851  ELVETPFLVVTLSEIEIVNLERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTALDGIKEW 910

Query: 394  LNRKNVKYYVNNLRPNWKELVSEV 465
            L+  ++KYY + L  NW++++  +
Sbjct: 911  LDTTDIKYYESRLNLNWRQILKTI 934


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