BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034424
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    46   6e-06

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 45.8 bits (107), Expect(2) = 6e-06
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
 Frame = -1

Query: 351  LPFLGSDHCPIFLDLSPNKVSSSRNWKLFQCWLRENSCKEQNLNAWSKPVNGSAAYVLDR 172
            LP +GSDH P+ LD +P  ++ +R ++  Q W       +    +W     GSA    +R
Sbjct: 822  LPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSWPPAFGGSAMRSWNR 881

Query: 171  KLSETRCTLSRWNKKLLG--IYKATSNLYNMTCQHSSNP 61
             L      L  W+K+       +    L ++   H SNP
Sbjct: 882  NLLSCGKALKMWSKEKFSNPSVQVADLLSDIEKLHQSNP 920



 Score = 28.9 bits (63), Expect(2) = 6e-06
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 439 WTSNRYGTGKIRTRLERALINVDWSLS 359
           W + R+G   I+ RL+RAL N+ WS S
Sbjct: 787 WFAMRHGRVFIKERLDRALGNIAWSSS 813