BLASTX nr result

ID: Papaver22_contig00034403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034403
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|...   186   2e-45
ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [C...   183   1e-44
ref|XP_003572504.1| PREDICTED: DNA primase small subunit-like [B...   179   2e-43
gb|AFK38123.1| unknown [Lotus japonicus]                              177   8e-43
ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...   177   8e-43

>ref|XP_002515859.1| DNA primase, putative [Ricinus communis]
           gi|223545014|gb|EEF46528.1| DNA primase, putative
           [Ricinus communis]
          Length = 515

 Score =  186 bits (472), Expect = 2e-45
 Identities = 84/118 (71%), Positives = 102/118 (86%), Gaps = 2/118 (1%)
 Frame = -3

Query: 349 FNPDHLKIYYAKHFPYADISKWMSYGNDRKHPACDLSYFGRRESSFILGNDVYLRYQSFN 170
           FNP++LK+YY K FP+A+I KWM YGND KHPACD SYFGRRE SF L ND+YLR+QSFN
Sbjct: 22  FNPNYLKLYYGKLFPHAEIFKWMCYGNDGKHPACDKSYFGRREFSFTLDNDIYLRFQSFN 81

Query: 169 NAAQMESSIRRECPFKIDIGAVYNVDPAKRNAY--TGENAFTPVEKELVFDIDMSDYD 2
           N +Q+++SI+ +CPFKIDIG VY VDPAKR+AY  +G+N FTPVE+EL+FDIDMSDYD
Sbjct: 82  NESQLKTSIKDKCPFKIDIGPVYTVDPAKRHAYSQSGDNVFTPVERELIFDIDMSDYD 139


>ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [Cucumis sativus]
           gi|449517297|ref|XP_004165682.1| PREDICTED: DNA primase
           small subunit-like [Cucumis sativus]
          Length = 450

 Score =  183 bits (464), Expect = 1e-44
 Identities = 83/116 (71%), Positives = 97/116 (83%)
 Frame = -3

Query: 349 FNPDHLKIYYAKHFPYADISKWMSYGNDRKHPACDLSYFGRRESSFILGNDVYLRYQSFN 170
           F+ ++LKIYY K FPYAD  KWMSYGND KHP  D SYFGRRE SF L ND+YLR+QSFN
Sbjct: 30  FDANYLKIYYGKLFPYADFFKWMSYGNDGKHPGSDQSYFGRREFSFTLDNDIYLRFQSFN 89

Query: 169 NAAQMESSIRRECPFKIDIGAVYNVDPAKRNAYTGENAFTPVEKELVFDIDMSDYD 2
           N ++ME SI+ +CPFKIDIG VY+VDPAKR+AY  +N FTPVE+ELVFDIDM+DYD
Sbjct: 90  NLSEMEISIKEKCPFKIDIGPVYSVDPAKRHAYADDNVFTPVERELVFDIDMTDYD 145


>ref|XP_003572504.1| PREDICTED: DNA primase small subunit-like [Brachypodium distachyon]
          Length = 450

 Score =  179 bits (455), Expect = 2e-43
 Identities = 81/118 (68%), Positives = 98/118 (83%), Gaps = 2/118 (1%)
 Frame = -3

Query: 349 FNPDHLKIYYAKHFPYADISKWMSYGNDRKHPACDLSYFGRRESSFILGNDVYLRYQSFN 170
           FN D+L+IYY K FPY D  KW+SYGND KHP CD SY GRRE SF L ND+YLR+QSF+
Sbjct: 26  FNADYLRIYYGKLFPYGDFFKWLSYGNDAKHPGCDQSYIGRRELSFTLENDIYLRFQSFD 85

Query: 169 NAAQMESSIRRECPFKIDIGAVYNVDPAKRNAY--TGENAFTPVEKELVFDIDMSDYD 2
           +AA++ESSI+ +CPFKIDIG VY+VDPAKR+AY  +G N F PVE+EL+FDID+SDYD
Sbjct: 86  SAAELESSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVFAPVERELIFDIDISDYD 143


>gb|AFK38123.1| unknown [Lotus japonicus]
          Length = 347

 Score =  177 bits (449), Expect = 8e-43
 Identities = 82/118 (69%), Positives = 98/118 (83%), Gaps = 2/118 (1%)
 Frame = -3

Query: 349 FNPDHLKIYYAKHFPYADISKWMSYGNDRKHPACDLSYFGRRESSFILGNDVYLRYQSFN 170
           FNP++LK+YY K FP+ DI +WMSYGND KHP CD SYFGRRE SF L ND+YLR+QSFN
Sbjct: 34  FNPNYLKLYYGKLFPFTDIFRWMSYGNDGKHPGCDSSYFGRREFSFTLENDIYLRFQSFN 93

Query: 169 NAAQMESSIRRECPFKIDIGAVYNVDPAKRNAYT-GEN-AFTPVEKELVFDIDMSDYD 2
           NA ++E+SI+ + PFKIDIG VY VDPAKR+AY  G+N  F PVE+EL+FDIDMSDYD
Sbjct: 94  NALELENSIKEKSPFKIDIGPVYTVDPAKRHAYAQGDNKVFAPVERELIFDIDMSDYD 151


>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score =  177 bits (449), Expect = 8e-43
 Identities = 79/118 (66%), Positives = 100/118 (84%), Gaps = 2/118 (1%)
 Frame = -3

Query: 349 FNPDHLKIYYAKHFPYADISKWMSYGNDRKHPACDLSYFGRRESSFILGNDVYLRYQSFN 170
           FN ++LK+YY K FP++D+ KWMSYGND KHPACD SY GRRE SF L +D+YLR+QSFN
Sbjct: 33  FNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSYIGRREFSFTLADDIYLRFQSFN 92

Query: 169 NAAQMESSIRRECPFKIDIGAVYNVDPAKRNAY--TGENAFTPVEKELVFDIDMSDYD 2
           +  +ME+SI+ +CPFKIDIG VY+VDP KR+AY  +G+N FTPVE+ELVFDID++DYD
Sbjct: 93  SVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVERELVFDIDITDYD 150


Top