BLASTX nr result

ID: Papaver22_contig00034402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034402
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   418   e-114
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...   416   e-114
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              380   e-103
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   380   e-103
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu...   360   4e-97

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
            gi|223525472|gb|EEF28048.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 578

 Score =  418 bits (1074), Expect = e-114
 Identities = 219/343 (63%), Positives = 258/343 (75%), Gaps = 1/343 (0%)
 Frame = +2

Query: 2    NVMSPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGKAG 181
            +V+SPGS            +SRRG+PVSIASLPMMYYEKYG+ LQAEGYLTESQRHGKAG
Sbjct: 240  HVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGKAG 299

Query: 182  YSLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPNYMEYRGEMTDSGGTAAGSRQIYLTFP 361
            YSLTKLLARLKNSIR+IDRPHGQHSV+L ED P Y+EY GE  D GG  AGSRQIYLTFP
Sbjct: 300  YSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSRQIYLTFP 359

Query: 362  ADSTFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAQGNPHFVCGAR 541
            A+S FTE DVS YF  FGPVQDVRIPCQQKRMFGFVTF++ ETVK ILA+GNPH+VCGAR
Sbjct: 360  AESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCGAR 419

Query: 542  VLVKPYREKSRLVADRKYSEKIDNSIYYPSHILDVHDPEDYSVSRVYDTSRLLKKQFIXX 721
            VLVKPYREKSRL+ DRK+SEK+ + +Y  SH +D  D E + +  + D SRLL+KQ +  
Sbjct: 420  VLVKPYREKSRLI-DRKFSEKLQHPMYNSSHFID-GDSELHPMPTISDNSRLLRKQLMEE 477

Query: 722  XXXXXXXXXXXXXXMHLATKSLAHQPYLG-FMDDVRLSEDHNQYTSTADRFSYFLDMLNS 898
                           HL  KSL HQ YLG  MD+++LSE+H ++ S A+RF+Y LD+LN+
Sbjct: 478  NEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSEEHAEFPS-AERFNYLLDVLNN 536

Query: 899  GSVPDDKTGNCSSNYGEQEGSQGINLPESPFASQITNSIPTVM 1027
            GS  + K    S+NY +Q+ SQGINLPESPFAS I + I TVM
Sbjct: 537  GSSSEGKFRRISTNYNDQD-SQGINLPESPFASPIRSGISTVM 578


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  416 bits (1068), Expect = e-114
 Identities = 216/341 (63%), Positives = 251/341 (73%), Gaps = 1/341 (0%)
 Frame = +2

Query: 8    MSPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGKAGYS 187
            +SPGS            +SRRG+PVSIASLPMMYYEKYGR+LQAEGYLTESQRHGKAGYS
Sbjct: 216  ISPGSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGYS 275

Query: 188  LTKLLARLKNSIRLIDRPHGQHSVVLAEDAPNYMEYRGEMTDSGGTAAGSRQIYLTFPAD 367
            LTKLLARLKNSIRLIDRPHGQHSV+L ED P Y+EY GE  D GG  AGSRQIYLTFPA+
Sbjct: 276  LTKLLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLTFPAE 335

Query: 368  STFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAQGNPHFVCGARVL 547
            STFTE+DVSNYF  FGPVQDVRIPCQQKRMFGFVTFV+ ETVK IL++GNPH VCGARVL
Sbjct: 336  STFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARVL 395

Query: 548  VKPYREKSRLVADRKYSEKIDNSIYYPSHILDVHDPEDYSVSRVYDTSRLLKKQFIXXXX 727
            VKPYREKSRLV DRKY+EKI +  +Y  H +D  D E +SV RV D SRLL+KQ +    
Sbjct: 396  VKPYREKSRLV-DRKYAEKIQHPFFYSQHFID-GDSELHSVPRVCDNSRLLRKQLMEEHE 453

Query: 728  XXXXXXXXXXXXMHLATKSLAHQPYLGF-MDDVRLSEDHNQYTSTADRFSYFLDMLNSGS 904
                          LA K LA   Y G  MD+ +LSE+      +A+ F+Y+ D+LN+GS
Sbjct: 454  QALELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSEEQADQFPSAEHFNYWFDVLNNGS 513

Query: 905  VPDDKTGNCSSNYGEQEGSQGINLPESPFASQITNSIPTVM 1027
              ++K  +  +N  EQ+ +QG+NLPESPFAS I   I TV+
Sbjct: 514  TSEEKHRHTRTNCSEQDSNQGVNLPESPFASAIGKGISTVI 554


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  380 bits (977), Expect = e-103
 Identities = 207/346 (59%), Positives = 240/346 (69%), Gaps = 5/346 (1%)
 Frame = +2

Query: 2    NVMSPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGKAG 181
            +V  PGS            +SRRG PVSIASLPMMYYEKYGR LQAEGYLTESQRHGKAG
Sbjct: 189  HVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAG 248

Query: 182  YSLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPNYMEYRGEMTDSGGTAAGSRQIYLTFP 361
            YSLTKLLARLKNSIRLIDRPHGQHSV+LAED P YME  GE +D G     S+QIYLTFP
Sbjct: 249  YSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFP 308

Query: 362  ADSTFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAQGNPHFVCGAR 541
            ADSTFTE+DVSNYF  FGPVQDVRIPCQQKRMFGFVTFV+ ETVK IL +GNPH++CGAR
Sbjct: 309  ADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGAR 368

Query: 542  VLVKPYREKSRLVADRKYSEKIDNSIYYPSHILDVHDPEDYSVSRVYDTSRLLKKQFIXX 721
            VLVKPYREK    A  +  ++  + +YY  H +D  D E  S+ RV D SRLL+KQ +  
Sbjct: 369  VLVKPYREK----ASSRTVDRRQHPMYYSPHFID-EDSELQSIPRVCDNSRLLRKQQLME 423

Query: 722  XXXXXXXXXXXXXXMHLATKSLAHQPYLGF-MDDVRLSED--HNQYTS--TADRFSYFLD 886
                              T   AH PY G+ MD+ +   D  H +     +A+R +Y L+
Sbjct: 424  EHEQALELERRRLSELQLTPKTAH-PYFGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLE 482

Query: 887  MLNSGSVPDDKTGNCSSNYGEQEGSQGINLPESPFASQITNSIPTV 1024
            +LN+GS  +D+    S+NY EQE SQG+NLPESPFAS I NSI TV
Sbjct: 483  VLNNGSTSEDR----STNYNEQESSQGLNLPESPFASPIRNSISTV 524


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
            vinifera]
          Length = 572

 Score =  380 bits (977), Expect = e-103
 Identities = 207/346 (59%), Positives = 240/346 (69%), Gaps = 5/346 (1%)
 Frame = +2

Query: 2    NVMSPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGKAG 181
            +V  PGS            +SRRG PVSIASLPMMYYEKYGR LQAEGYLTESQRHGKAG
Sbjct: 236  HVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAG 295

Query: 182  YSLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPNYMEYRGEMTDSGGTAAGSRQIYLTFP 361
            YSLTKLLARLKNSIRLIDRPHGQHSV+LAED P YME  GE +D G     S+QIYLTFP
Sbjct: 296  YSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFP 355

Query: 362  ADSTFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAQGNPHFVCGAR 541
            ADSTFTE+DVSNYF  FGPVQDVRIPCQQKRMFGFVTFV+ ETVK IL +GNPH++CGAR
Sbjct: 356  ADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGAR 415

Query: 542  VLVKPYREKSRLVADRKYSEKIDNSIYYPSHILDVHDPEDYSVSRVYDTSRLLKKQFIXX 721
            VLVKPYREK    A  +  ++  + +YY  H +D  D E  S+ RV D SRLL+KQ +  
Sbjct: 416  VLVKPYREK----ASSRTVDRRQHPMYYSPHFID-EDSELQSIPRVCDNSRLLRKQQLME 470

Query: 722  XXXXXXXXXXXXXXMHLATKSLAHQPYLGF-MDDVRLSED--HNQYTS--TADRFSYFLD 886
                              T   AH PY G+ MD+ +   D  H +     +A+R +Y L+
Sbjct: 471  EHEQALELERRRLSELQLTPKTAH-PYFGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLE 529

Query: 887  MLNSGSVPDDKTGNCSSNYGEQEGSQGINLPESPFASQITNSIPTV 1024
            +LN+GS  +D+    S+NY EQE SQG+NLPESPFAS I NSI TV
Sbjct: 530  VLNNGSTSEDR----STNYNEQESSQGLNLPESPFASPIRNSISTV 571


>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
            gi|223531534|gb|EEF33365.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 551

 Score =  360 bits (923), Expect = 4e-97
 Identities = 195/342 (57%), Positives = 237/342 (69%), Gaps = 1/342 (0%)
 Frame = +2

Query: 5    VMSPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGKAGY 184
            + SPGS            +SR+G PVSIASLPM+YYEKYG++LQA+GYLTESQRHGKAGY
Sbjct: 231  IFSPGSLEKLELEIIELLKSRKGNPVSIASLPMLYYEKYGKVLQADGYLTESQRHGKAGY 290

Query: 185  SLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPNYMEYRGEMTDSGGTAAGSRQIYLTFPA 364
            SLTKLLARLKNSIRLIDRPHGQH+V+LAED P YME RG+  D G   +GSRQIYLTFPA
Sbjct: 291  SLTKLLARLKNSIRLIDRPHGQHAVILAEDVPKYMENRGDRNDPGPIVSGSRQIYLTFPA 350

Query: 365  DSTFTEEDVSNYFKGFGPVQDVRIPCQQKRMFGFVTFVYPETVKIILAQGNPHFVCGARV 544
            +STFTE+DVSNYF  FGPV+DVRIPCQQKRMFGFVTF   +TVKIILA+GNPHFVC ARV
Sbjct: 351  ESTFTEDDVSNYFNKFGPVEDVRIPCQQKRMFGFVTFESADTVKIILAKGNPHFVCNARV 410

Query: 545  LVKPYREKSRLVADRKYSEKIDNSIYYPSHILDVHDPEDYSVSRVYDTSRLLKKQFIXXX 724
            LVKPYRE   L+             Y+ SH +D+ D E +S+SR Y+TSRLL+KQ +   
Sbjct: 411  LVKPYRENQSLL------------XYFSSHYVDM-DAELHSMSRGYETSRLLRKQLLEEQ 457

Query: 725  XXXXXXXXXXXXXMHLATKSLAHQPYLGF-MDDVRLSEDHNQYTSTADRFSYFLDMLNSG 901
                              K ++H  Y  + MD  ++SED+ +         + LD +N G
Sbjct: 458  EQALELERRQRLAELRIRKPVSHHSYFDYPMDGFKVSEDNFELP------YHVLDFIN-G 510

Query: 902  SVPDDKTGNCSSNYGEQEGSQGINLPESPFASQITNSIPTVM 1027
            S  DDK  +  +NY +Q+ SQG+NLPESPFAS I +SI T++
Sbjct: 511  SGNDDKIRHIETNYADQD-SQGLNLPESPFASAIPSSISTII 551


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