BLASTX nr result

ID: Papaver22_contig00034158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034158
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    63   3e-08
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    57   1e-06
gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]    57   2e-06
ref|NP_189030.1| F-box/kelch-repeat protein [Arabidopsis thalian...    57   2e-06
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    57   2e-06

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
 Frame = +3

Query: 3   GSCNGLICFKFRVIDWGDDYQRRREEETKYTVL--NPLTRQFKEFSMQIVDTIGNGINYG 176
           GSCNGL+C    + +  DD         K+ ++   PL R+    +  I   +   + YG
Sbjct: 90  GSCNGLLC----ICNIADDIAFWNPTIRKHRIIPSEPLIRKETNENNTITTLLAAHV-YG 144

Query: 177 FGYDNKIHDYKLVAIS------NNGNSSNIEAYKVRSNSQTSIRGTPKYWFYCGKRSCGV 338
           FGYD+   DYKLV+IS      N    S+++ Y +R++   ++   P  +  C  R+ GV
Sbjct: 145 FGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVWKTLPSMP--YALCCARTMGV 202

Query: 339 FLNGCLYWL--RCISPHAVS-ILCFDISNEI 422
           F++G L+W+  R + P +   I+ FD+  E+
Sbjct: 203 FVSGALHWVVTRDLEPESRDLIVAFDLRFEV 233


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   GSCNGLICFKFRVIDWGDDYQRRREEETKYTVLNPLTRQFKEFSMQIVDTIGNGINYGFG 182
           GSCNGLI   F     G D++         TV NP T + ++       T  + + YGFG
Sbjct: 107 GSCNGLISAVF-----GSDHE--------ITVWNPSTGESRKLPAPTSST-EDKLFYGFG 152

Query: 183 YDNKIHDYKLV--AISNNGNSSNIEAYKVRSNSQTSIRGTPKYWFYCGKRSCG--VFLNG 350
           YD+K+ DYK+V  A S + N   +E + ++ N   +I+       +C  R  G  + LNG
Sbjct: 153 YDSKLDDYKIVRGASSASCNEVQMEVFNLKGNRWRAIQN-----LHCNVRFQGSAIALNG 207

Query: 351 CLYWLRCISPHAVSILCFDISNE 419
            L+WL       + I+  D++ E
Sbjct: 208 ILHWLVDQLNEGLMIVSLDLAEE 230


>gb|ABI34319.1| Putative F-box protein, identical [Solanum demissum]
          Length = 386

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
 Frame = +3

Query: 3   GSCNGLICFKFRVIDWGDDYQRRREEETKYTVLNPLTRQFKEFSMQIVDTIGNGINYGFG 182
           GS NGLIC                  + +  + NP   + KE      +   + I YGFG
Sbjct: 112 GSVNGLICVV--------------HGQKEAYIWNPTITKSKELPKFTSNMCSSSIKYGFG 157

Query: 183 YDNKIHDYKLVAIS---NNGNSSN----IEAYKVRSNSQTSIRGTPKYWFYCGKRSCGVF 341
           YD    DYK+V I    N+ +SSN    +  Y +R+NS T+ R   + +        G F
Sbjct: 158 YDESRDDYKVVFIHYPYNHSSSSNMTTVVHIYSLRNNSWTTFRDQLQCFLV---NHYGRF 214

Query: 342 LNGCLYWL--RCISPHAV-SILCFDISN 416
           +NG LYW    CI+ + V +I  FD+++
Sbjct: 215 VNGKLYWTSSTCINKYKVCNITSFDLAD 242


>ref|NP_189030.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75273451|sp|Q9LIR8.1|FBK67_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g23880
           gi|9294656|dbj|BAB03005.1| unnamed protein product
           [Arabidopsis thaliana] gi|26449693|dbj|BAC41970.1|
           unknown protein [Arabidopsis thaliana]
           gi|30725382|gb|AAP37713.1| At3g23880 [Arabidopsis
           thaliana] gi|332643304|gb|AEE76825.1| F-box/kelch-repeat
           protein [Arabidopsis thaliana]
          Length = 364

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   GSCNGLICFKFRVIDWGDDYQRRREEETKYTVLNPLTRQFKEFSMQIVDTIGNG--INYG 176
           G+C+GL+CF         DY +         + NP  +  +  S   ++T  +   + YG
Sbjct: 114 GTCHGLVCFHV-------DYDK------SLYLWNPTIKLQQRLSSSDLETSDDECVVTYG 160

Query: 177 FGYDNKIHDYKLVAISNNGNSSNIEA--YKVRSNSQTSIRGTPKYWFYCGKRSCGVFLNG 350
           FGYD    DYK+VA+    +   IE   Y  R     S    P       K   G+++NG
Sbjct: 161 FGYDESEDDYKVVALLQQRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYING 220

Query: 351 CLYWLRCISPHAVSILCFDISNE 419
            L W    S  + +I+ +D+S +
Sbjct: 221 TLNWAATSSSSSWTIISYDMSRD 243


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
 Frame = +3

Query: 3   GSCNGLICFKFRVIDWGDDYQRRREEETKYTVLNPLTRQFKEFSMQIVDTIGNGINYGFG 182
           GS NGLIC           + R+RE      + NP   + KE      +   +GI  GFG
Sbjct: 111 GSVNGLICVA---------HVRQREAY----IWNPAITKSKELPKSTSNLCSDGIKCGFG 157

Query: 183 YDNKIHDYKLVAIS---NNGNSSNIEAYKVRSNSQTSIRGTPKYWFYCGKRSCGVFLNGC 353
           YD    DYK+V I     + + + +  Y +R+NS T++    +  F       G F+NG 
Sbjct: 158 YDESRDDYKVVFIDYPIRHNHRTVVNIYSLRTNSWTTLHDQLQGIFLLNLH--GRFVNGK 215

Query: 354 LYWL--RCISPHAV-SILCFDISN 416
           LYW    CI+ + V +I  FD+++
Sbjct: 216 LYWTSSTCINNYKVCNITSFDLAD 239


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