BLASTX nr result

ID: Papaver22_contig00034146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034146
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...   223   1e-56
emb|CBI35070.3| unnamed protein product [Vitis vinifera]              218   3e-55
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...   218   3e-55
ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III s...   216   1e-54
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...   216   1e-54

>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score =  223 bits (568), Expect = 1e-56
 Identities = 110/129 (85%), Positives = 117/129 (90%), Gaps = 3/129 (2%)
 Frame = -2

Query: 422  YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRGRNGGLQVGEMERDCSVA*GASMLIYERL 243
            YQKLKHMVLDKMHARGSGPRVMLTRQPTEGR RNGGL+VGEMERDC +A GASMLIYERL
Sbjct: 1030 YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERL 1089

Query: 242  MISSDPFEVQVCRVCGLLGYYNRKLKTGVCSSCKNYENMSKMKLPY---VLFQELQSMNI 72
            MISSDPFEVQVCRVCGLLGYYN KLKTG+CSSCKN +N+S MKLPY   +L QELQSMNI
Sbjct: 1090 MISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNI 1149

Query: 71   APHLKLSEA 45
             P LKL+EA
Sbjct: 1150 VPRLKLAEA 1158


>emb|CBI35070.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  218 bits (556), Expect = 3e-55
 Identities = 105/129 (81%), Positives = 117/129 (90%), Gaps = 3/129 (2%)
 Frame = -2

Query: 422 YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRGRNGGLQVGEMERDCSVA*GASMLIYERL 243
           YQKLKHMVLDKMHARGSGPRVMLTRQPTEGR RNGGL+VGEMERDC +A GASMLI+ERL
Sbjct: 333 YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERL 392

Query: 242 MISSDPFEVQVCRVCGLLGYYNRKLKTGVCSSCKNYENMSKMKLPY---VLFQELQSMNI 72
           M+SSDPFEVQVCRVCGLLGYYN KLK G+CS+CKN +N+S MKLPY   +LFQELQ+MN+
Sbjct: 393 MVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNV 452

Query: 71  APHLKLSEA 45
            P LKL+EA
Sbjct: 453 VPRLKLTEA 461


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score =  218 bits (556), Expect = 3e-55
 Identities = 105/129 (81%), Positives = 117/129 (90%), Gaps = 3/129 (2%)
 Frame = -2

Query: 422  YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRGRNGGLQVGEMERDCSVA*GASMLIYERL 243
            YQKLKHMVLDKMHARGSGPRVMLTRQPTEGR RNGGL+VGEMERDC +A GASMLI+ERL
Sbjct: 1014 YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERL 1073

Query: 242  MISSDPFEVQVCRVCGLLGYYNRKLKTGVCSSCKNYENMSKMKLPY---VLFQELQSMNI 72
            M+SSDPFEVQVCRVCGLLGYYN KLK G+CS+CKN +N+S MKLPY   +LFQELQ+MN+
Sbjct: 1074 MVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNV 1133

Query: 71   APHLKLSEA 45
             P LKL+EA
Sbjct: 1134 VPRLKLTEA 1142


>ref|XP_003529060.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1152

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/129 (81%), Positives = 115/129 (89%), Gaps = 3/129 (2%)
 Frame = -2

Query: 422  YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRGRNGGLQVGEMERDCSVA*GASMLIYERL 243
            YQKLKHMVLDKMHARGSGPRVMLTRQPTEGR RNGGL+VGEMERDC +A GASMLIYERL
Sbjct: 1024 YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERL 1083

Query: 242  MISSDPFEVQVCRVCGLLGYYNRKLKTGVCSSCKNYENMSKMKLPY---VLFQELQSMNI 72
            M+SSDPFEVQVC  CGLLGYYN KLKTG+CSSCKN +N+S MKLPY   ++ QELQSMNI
Sbjct: 1084 MLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNI 1143

Query: 71   APHLKLSEA 45
             P LKL++A
Sbjct: 1144 VPRLKLADA 1152


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Glycine
            max]
          Length = 1166

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/129 (81%), Positives = 115/129 (89%), Gaps = 3/129 (2%)
 Frame = -2

Query: 422  YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRGRNGGLQVGEMERDCSVA*GASMLIYERL 243
            YQKLKHMVLDKMHARGSGPRVMLTRQPTEGR RNGGL+VGEMERDC +A GASMLIYERL
Sbjct: 1038 YQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERL 1097

Query: 242  MISSDPFEVQVCRVCGLLGYYNRKLKTGVCSSCKNYENMSKMKLPY---VLFQELQSMNI 72
            M+SSDPFEVQVC  CGLLGYYN KLKTG+CSSCKN +N+S MKLPY   ++ QELQSMNI
Sbjct: 1098 MLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNI 1157

Query: 71   APHLKLSEA 45
             P LKL++A
Sbjct: 1158 VPRLKLADA 1166


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