BLASTX nr result

ID: Papaver22_contig00034107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034107
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...   159   2e-37
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...   159   2e-37
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   159   3e-37
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...   156   2e-36
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   155   4e-36

>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score =  159 bits (403), Expect = 2e-37
 Identities = 86/187 (45%), Positives = 120/187 (64%), Gaps = 1/187 (0%)
 Frame = -1

Query: 564  HSNNEVITNILVKHFQAVTTTSNPEIDEDFL-SLFPSCVTEAKNLSLIQVPTEEEVKATV 388
            HS  + +  +  ++FQ + T ++P ID   + SL    VT+A N  L +  +EEE+   +
Sbjct: 950  HSTTKELERMATEYFQRLFT-ADPSIDHSRVTSLMKPKVTDAMNEELCKTFSEEEIANAL 1008

Query: 387  FQIKPWAAPGPDGFQAGFYQKSWAIVGNAVTRMVQAFFTSGYLLKQLNHTFQVLIPKSEQ 208
            FQI P  APGPDGF   FYQ++WAI+ + + R VQ FF+ G +   +N T  VLIPK+EQ
Sbjct: 1009 FQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQ 1068

Query: 207  VYTASDYRPISLCNVSYKIISKLLTNRLKPIIAKLISPWQAAFVPGRNIADNTIIAHEVI 28
                 D+RPISLCNV YKI+SK L NRL+PI+  L+S  Q+AFVPGR I DN +IA E  
Sbjct: 1069 PQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITDNALIAFEYF 1128

Query: 27   AYMKRTQ 7
             +++R +
Sbjct: 1129 HHIQRNK 1135


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score =  159 bits (403), Expect = 2e-37
 Identities = 86/187 (45%), Positives = 120/187 (64%), Gaps = 1/187 (0%)
 Frame = -1

Query: 564  HSNNEVITNILVKHFQAVTTTSNPEIDEDFL-SLFPSCVTEAKNLSLIQVPTEEEVKATV 388
            HS  + +  +  ++FQ + T ++P ID   + SL    VT+A N  L +  +EEE+   +
Sbjct: 915  HSTTKELERMATEYFQRLFT-ADPSIDHSRVTSLMKPKVTDAMNEELCKTFSEEEIANAL 973

Query: 387  FQIKPWAAPGPDGFQAGFYQKSWAIVGNAVTRMVQAFFTSGYLLKQLNHTFQVLIPKSEQ 208
            FQI P  APGPDGF   FYQ++WAI+ + + R VQ FF+ G +   +N T  VLIPK+EQ
Sbjct: 974  FQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQ 1033

Query: 207  VYTASDYRPISLCNVSYKIISKLLTNRLKPIIAKLISPWQAAFVPGRNIADNTIIAHEVI 28
                 D+RPISLCNV YKI+SK L NRL+PI+  L+S  Q+AFVPGR I DN +IA E  
Sbjct: 1034 PQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITDNALIAFEYF 1093

Query: 27   AYMKRTQ 7
             +++R +
Sbjct: 1094 HHIQRNK 1100


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  159 bits (402), Expect = 3e-37
 Identities = 80/161 (49%), Positives = 106/161 (65%)
 Frame = -1

Query: 498 NPEIDEDFLSLFPSCVTEAKNLSLIQVPTEEEVKATVFQIKPWAAPGPDGFQAGFYQKSW 319
           N  +D + LS     V+EA N  L    + EE+K  VF + P  +PGPDGF   F+QK W
Sbjct: 420 NQNVDFNLLS---PIVSEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYW 476

Query: 318 AIVGNAVTRMVQAFFTSGYLLKQLNHTFQVLIPKSEQVYTASDYRPISLCNVSYKIISKL 139
            ++G +V R VQAFF SGY+LK++NHTF  LIPK ++   A+ +RPISLC+  YK+ISK+
Sbjct: 477 TLIGKSVCRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKI 536

Query: 138 LTNRLKPIIAKLISPWQAAFVPGRNIADNTIIAHEVIAYMK 16
           +TNRLK  + K+I P Q AF+P R I DN +IAHEV    K
Sbjct: 537 ITNRLKITLGKIIHPLQGAFIPERLIQDNILIAHEVFHSFK 577


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score =  156 bits (395), Expect = 2e-36
 Identities = 84/176 (47%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
 Frame = -1

Query: 564 HSNNEVITNILVKHFQAVTTTSNPEIDEDFL-SLFPSCVTEAKNLSLIQVPTEEEVKATV 388
           HS  + + ++  ++FQ + T ++P ID   + SL    VT+A N  L +  +EEE+   +
Sbjct: 458 HSTTKELESMATEYFQRLFT-ADPSIDHSRVTSLIKPKVTDAMNEELCKTVSEEEIANAL 516

Query: 387 FQIKPWAAPGPDGFQAGFYQKSWAIVGNAVTRMVQAFFTSGYLLKQLNHTFQVLIPKSEQ 208
           FQI P  APGPDGF   FYQ++WAI+ + + R VQ FF+SG +   +N T  VLIPK+EQ
Sbjct: 517 FQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLIPKTEQ 576

Query: 207 VYTASDYRPISLCNVSYKIISKLLTNRLKPIIAKLISPWQAAFVPGRNIADNTIIA 40
                D+RPISLCNV YKI+SK L NRL+PI+  L+S  Q AFVPGR I +N +IA
Sbjct: 577 PQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQRAFVPGRLITNNAVIA 632


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  155 bits (392), Expect = 4e-36
 Identities = 77/139 (55%), Positives = 100/139 (71%)
 Frame = -1

Query: 429 LIQVPTEEEVKATVFQIKPWAAPGPDGFQAGFYQKSWAIVGNAVTRMVQAFFTSGYLLKQ 250
           LI+  T EEV+  VFQ+    APGPDG  A FYQK W+IVG  + R V  FFT+GY+L++
Sbjct: 437 LIKPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQE 496

Query: 249 LNHTFQVLIPKSEQVYTASDYRPISLCNVSYKIISKLLTNRLKPIIAKLISPWQAAFVPG 70
            N T   LIPK E+   A  +RPISLCNV YKIISK++ NRLKPI+  +++P+Q AFVPG
Sbjct: 497 WNQTNICLIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFVPG 556

Query: 69  RNIADNTIIAHEVIAYMKR 13
           R I+DN +IAHEV+  +K+
Sbjct: 557 RLISDNCLIAHEVVNLIKQ 575


Top