BLASTX nr result

ID: Papaver22_contig00033460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00033460
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...   116   2e-24
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...   113   2e-23
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   111   8e-23
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...   105   3e-21
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   105   4e-21

>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score =  116 bits (291), Expect = 2e-24
 Identities = 66/173 (38%), Positives = 97/173 (56%)
 Frame = +3

Query: 6   ISHSFYADDSLIFLEASLHNVKGIRHILDIFSSWSGQLXXXXXXXXXXXXNLPKRLARHL 185
           ISH  +ADD ++F EAS+  ++ IR IL+ F   SGQ             N+ + L + +
Sbjct: 353 ISHICFADDLILFAEASVSQIRVIRRILETFCIASGQKVSLDKSKIFFSKNVSRDLEKLI 412

Query: 186 CRVLHMKYSTQPGRYLGVNIQWGRLKSDNFTESLVKLTNRLSGWKQNSLNFAGRDVLIKS 365
            +   +K + + G+YLG+ I   R+  D F E L ++++RL+GWK  SL+FAGR  L KS
Sbjct: 413 SKESGIKSTRELGKYLGMPILQRRINKDTFGEVLERVSSRLAGWKGRSLSFAGRLTLTKS 472

Query: 366 VLDPSLNHLMSTLKLPKFILNKVDQLRRNFLWHDREGKHTVHTIKWDTVCKPQ 524
           VL     H MST+ LP+  L  +D+L R FL      K  +H + WD VC P+
Sbjct: 473 VLSLIPIHTMSTISLPQSTLEGLDKLARVFLLGSSAEKKKLHLVAWDRVCLPK 525


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score =  113 bits (283), Expect = 2e-23
 Identities = 62/173 (35%), Positives = 94/173 (54%)
 Frame = +3

Query: 6   ISHSFYADDSLIFLEASLHNVKGIRHILDIFSSWSGQLXXXXXXXXXXXXNLPKRLARHL 185
           +SH  +ADD ++F EAS+  ++ IR +L+ F   SGQ             N+ + L + +
Sbjct: 201 LSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIFFSENVSRDLGKLI 260

Query: 186 CRVLHMKYSTQPGRYLGVNIQWGRLKSDNFTESLVKLTNRLSGWKQNSLNFAGRDVLIKS 365
                +  + + G+YLG+ +   R+  D F + L KLT RL+GWK   L+ AGR  L K+
Sbjct: 261 SDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRLAGWKGRFLSLAGRVTLTKA 320

Query: 366 VLDPSLNHLMSTLKLPKFILNKVDQLRRNFLWHDREGKHTVHTIKWDTVCKPQ 524
           VL     H MST+ LPK  L+ +D++ R+FLW     +   H I W  VCKP+
Sbjct: 321 VLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPR 373


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score =  111 bits (277), Expect = 8e-23
 Identities = 58/173 (33%), Positives = 85/173 (49%)
 Frame = +3

Query: 6   ISHSFYADDSLIFLEASLHNVKGIRHILDIFSSWSGQLXXXXXXXXXXXXNLPKRLARHL 185
           ISH  +ADD L+F EAS+     + H LD+F   SGQ             N+   L   +
Sbjct: 106 ISHLLFADDLLLFAEASIEQAHCVLHCLDMFCQSSGQKINREKTQVYFSKNVDNHLREDI 165

Query: 186 CRVLHMKYSTQPGRYLGVNIQWGRLKSDNFTESLVKLTNRLSGWKQNSLNFAGRDVLIKS 365
            +          G+YLG NI  GR    +F   + K+ N+LSGWKQ  L+ AGR  L K 
Sbjct: 166 IQHTGFNQVNSLGKYLGANITPGRTSRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKF 225

Query: 366 VLDPSLNHLMSTLKLPKFILNKVDQLRRNFLWHDREGKHTVHTIKWDTVCKPQ 524
           V+     + M   K+PK I +++++++R F+W D       H + WD  C P+
Sbjct: 226 VISSIPYYHMQYAKIPKTICDEIEKIQRGFVWGDSNQGRKAHLVSWDVCCLPK 278


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/170 (32%), Positives = 94/170 (55%)
 Frame = +3

Query: 3   LISHSFYADDSLIFLEASLHNVKGIRHILDIFSSWSGQLXXXXXXXXXXXXNLPKRLARH 182
           L+SH  +ADD ++F EAS+  ++ +R +L+ F   SGQ             N+ + L + 
Sbjct: 130 LLSHICFADDLILFAEASVAQIRVVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLEKF 189

Query: 183 LCRVLHMKYSTQPGRYLGVNIQWGRLKSDNFTESLVKLTNRLSGWKQNSLNFAGRDVLIK 362
           +     +K + + G+YLG+ +   R+  D F E L+++++RL+GWK   L+ AGR  L K
Sbjct: 190 ISDESGIKSTKELGKYLGMPVLQKRINKDTFGEILLRVSSRLAGWKGRMLSLAGRLTLTK 249

Query: 363 SVLDPSLNHLMSTLKLPKFILNKVDQLRRNFLWHDREGKHTVHTIKWDTV 512
           SVL     H MST+ LPK  L+  D++ ++F+W     K   H + W+ +
Sbjct: 250 SVLSSIPIHTMSTIALPKATLDGFDRISKSFVWGSSTEKKKQHLLAWNKI 299


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  105 bits (262), Expect = 4e-21
 Identities = 57/173 (32%), Positives = 92/173 (53%)
 Frame = +3

Query: 6    ISHSFYADDSLIFLEASLHNVKGIRHILDIFSSWSGQLXXXXXXXXXXXXNLPKRLARHL 185
            +SH  +ADD ++F EAS+  ++ IR +L+ F   SGQ             N+ + + + +
Sbjct: 539  LSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLI 598

Query: 186  CRVLHMKYSTQPGRYLGVNIQWGRLKSDNFTESLVKLTNRLSGWKQNSLNFAGRDVLIKS 365
                 +  + + G+YLG+ I   R+  + F E L +++ RL+GWK  SL+ AGR  L K+
Sbjct: 599  SEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKA 658

Query: 366  VLDPSLNHLMSTLKLPKFILNKVDQLRRNFLWHDREGKHTVHTIKWDTVCKPQ 524
            VL     H+MS + LP   L+ +D+  R FLW     K   H + W  +CKP+
Sbjct: 659  VLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPK 711


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